Protein–RNA interactions for Protein: O60287

URB1, Nucleolar pre-ribosomal-associated protein 1, humanhuman

Known RBP Predictions only

Length 2,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
URB1O60287 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC17.83■□□□□ 0.45
URB1O60287 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC17.83■□□□□ 0.45
URB1O60287 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC17.83■□□□□ 0.45
URB1O60287 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
URB1O60287 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
URB1O60287 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.45
URB1O60287 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.45
URB1O60287 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
URB1O60287 AC007225.1-201ENST00000566331 1836 ntBASIC17.83■□□□□ 0.44
URB1O60287 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
URB1O60287 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
URB1O60287 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
URB1O60287 IL9RP2-201ENST00000423948 1312 ntBASIC17.83■□□□□ 0.44
URB1O60287 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
URB1O60287 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC17.83■□□□□ 0.44
URB1O60287 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC17.83■□□□□ 0.44
URB1O60287 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
URB1O60287 AC104819.1-201ENST00000504587 486 ntBASIC17.83■□□□□ 0.44
URB1O60287 AL353801.3-201ENST00000609898 542 ntBASIC17.83■□□□□ 0.44
URB1O60287 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
URB1O60287 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
URB1O60287 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
URB1O60287 AL049796.1-201ENST00000565336 1766 ntBASIC17.83■□□□□ 0.44
URB1O60287 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
URB1O60287 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
URB1O60287 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC17.82■□□□□ 0.44
URB1O60287 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC17.82■□□□□ 0.44
URB1O60287 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC17.82■□□□□ 0.44
URB1O60287 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
URB1O60287 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
URB1O60287 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
URB1O60287 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
URB1O60287 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
URB1O60287 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
URB1O60287 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
URB1O60287 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
URB1O60287 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC17.82■□□□□ 0.44
URB1O60287 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC17.82■□□□□ 0.44
URB1O60287 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.82■□□□□ 0.44
URB1O60287 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC17.82■□□□□ 0.44
URB1O60287 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
URB1O60287 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
URB1O60287 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
URB1O60287 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
URB1O60287 AC074051.2-201ENST00000565115 352 ntBASIC17.81■□□□□ 0.44
URB1O60287 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC17.81■□□□□ 0.44
URB1O60287 AL355385.1-201ENST00000606123 409 ntBASIC17.81■□□□□ 0.44
URB1O60287 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
URB1O60287 AL691432.2-201ENST00000607222 2038 ntBASIC17.81■□□□□ 0.44
URB1O60287 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
URB1O60287 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
URB1O60287 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
URB1O60287 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
URB1O60287 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
URB1O60287 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC17.81■□□□□ 0.44
URB1O60287 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
URB1O60287 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.81■□□□□ 0.44
URB1O60287 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
URB1O60287 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
URB1O60287 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
URB1O60287 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
URB1O60287 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC17.8■□□□□ 0.44
URB1O60287 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC17.8■□□□□ 0.44
URB1O60287 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
URB1O60287 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
URB1O60287 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
URB1O60287 AL031284.1-201ENST00000419297 478 ntBASIC17.8■□□□□ 0.44
URB1O60287 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
URB1O60287 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
URB1O60287 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC17.8■□□□□ 0.44
URB1O60287 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC17.8■□□□□ 0.44
URB1O60287 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
URB1O60287 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC17.8■□□□□ 0.44
URB1O60287 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
URB1O60287 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC17.8■□□□□ 0.44
URB1O60287 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
URB1O60287 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
URB1O60287 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17.8■□□□□ 0.44
URB1O60287 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
URB1O60287 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC17.8■□□□□ 0.44
URB1O60287 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
URB1O60287 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
URB1O60287 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
URB1O60287 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC17.79■□□□□ 0.44
URB1O60287 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC17.79■□□□□ 0.44
URB1O60287 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
URB1O60287 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
URB1O60287 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC17.79■□□□□ 0.44
URB1O60287 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
URB1O60287 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
URB1O60287 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.79■□□□□ 0.44
URB1O60287 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
URB1O60287 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
URB1O60287 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC17.79■□□□□ 0.44
URB1O60287 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
URB1O60287 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
URB1O60287 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
URB1O60287 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC17.79■□□□□ 0.44
URB1O60287 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.79■□□□□ 0.44
URB1O60287 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms