Protein–RNA interactions for Protein: O43927

CXCL13, C-X-C motif chemokine 13, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL13O43927 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CXCL13O43927 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC16.92■□□□□ 0.3
CXCL13O43927 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CXCL13O43927 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
CXCL13O43927 KRT18P57-201ENST00000443599 1254 ntBASIC16.92■□□□□ 0.3
CXCL13O43927 ATP5G1P1-201ENST00000448724 379 ntBASIC16.92■□□□□ 0.3
CXCL13O43927 GXYLT1P6-201ENST00000456472 1187 ntBASIC16.92■□□□□ 0.3
CXCL13O43927 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC16.92■□□□□ 0.3
CXCL13O43927 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC16.92■□□□□ 0.3
CXCL13O43927 AC010203.1-204ENST00000548782 407 ntBASIC16.92■□□□□ 0.3
CXCL13O43927 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC16.92■□□□□ 0.3
CXCL13O43927 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC16.92■□□□□ 0.3
CXCL13O43927 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CXCL13O43927 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CXCL13O43927 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC16.92■□□□□ 0.3
CXCL13O43927 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CXCL13O43927 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CXCL13O43927 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC16.92■□□□□ 0.3
CXCL13O43927 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CXCL13O43927 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CXCL13O43927 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC16.92■□□□□ 0.3
CXCL13O43927 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CXCL13O43927 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CXCL13O43927 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CXCL13O43927 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
CXCL13O43927 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC16.91■□□□□ 0.3
CXCL13O43927 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC16.91■□□□□ 0.3
CXCL13O43927 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC16.91■□□□□ 0.3
CXCL13O43927 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CXCL13O43927 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC16.91■□□□□ 0.3
CXCL13O43927 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC16.91■□□□□ 0.3
CXCL13O43927 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CXCL13O43927 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
CXCL13O43927 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CXCL13O43927 TERF1P1-201ENST00000311003 1181 ntBASIC16.91■□□□□ 0.3
CXCL13O43927 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CXCL13O43927 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC16.91■□□□□ 0.3
CXCL13O43927 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC16.91■□□□□ 0.3
CXCL13O43927 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC16.91■□□□□ 0.3
CXCL13O43927 MIR4674-201ENST00000582457 87 ntBASIC16.91■□□□□ 0.3
CXCL13O43927 GPX4-207ENST00000589115 812 ntTSL 2 BASIC16.91■□□□□ 0.3
CXCL13O43927 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC16.91■□□□□ 0.3
CXCL13O43927 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CXCL13O43927 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC16.91■□□□□ 0.3
CXCL13O43927 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CXCL13O43927 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CXCL13O43927 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CXCL13O43927 AL049812.1-201ENST00000432563 2267 ntBASIC16.91■□□□□ 0.3
CXCL13O43927 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CXCL13O43927 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CXCL13O43927 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CXCL13O43927 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CXCL13O43927 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CXCL13O43927 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC16.91■□□□□ 0.3
CXCL13O43927 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CXCL13O43927 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CXCL13O43927 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CXCL13O43927 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CXCL13O43927 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CXCL13O43927 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
CXCL13O43927 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC16.9■□□□□ 0.3
CXCL13O43927 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CXCL13O43927 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CXCL13O43927 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC16.9■□□□□ 0.3
CXCL13O43927 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC16.9■□□□□ 0.3
CXCL13O43927 RCN1P1-201ENST00000400413 996 ntBASIC16.9■□□□□ 0.3
CXCL13O43927 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC16.9■□□□□ 0.3
CXCL13O43927 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
CXCL13O43927 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC16.9■□□□□ 0.3
CXCL13O43927 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CXCL13O43927 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CXCL13O43927 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC16.9■□□□□ 0.3
CXCL13O43927 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
CXCL13O43927 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CXCL13O43927 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CXCL13O43927 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CXCL13O43927 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CXCL13O43927 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CXCL13O43927 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CXCL13O43927 GPAT2P1-201ENST00000444924 1672 ntBASIC16.89■□□□□ 0.29
CXCL13O43927 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CXCL13O43927 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CXCL13O43927 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC16.89■□□□□ 0.29
CXCL13O43927 RN7SL850P-201ENST00000579959 291 ntBASIC16.89■□□□□ 0.29
CXCL13O43927 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC16.89■□□□□ 0.29
CXCL13O43927 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC16.89■□□□□ 0.29
CXCL13O43927 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
CXCL13O43927 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CXCL13O43927 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC16.88■□□□□ 0.29
CXCL13O43927 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CXCL13O43927 KRT8P45-201ENST00000414328 1447 ntBASIC16.88■□□□□ 0.29
CXCL13O43927 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CXCL13O43927 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
CXCL13O43927 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CXCL13O43927 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
CXCL13O43927 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CXCL13O43927 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CXCL13O43927 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CXCL13O43927 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
CXCL13O43927 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms