Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 AC068587.9-201ENST00000641814 219 ntBASIC21.21■□□□□ 0.99
ACTN4O43707 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ACTN4O43707 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
ACTN4O43707 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
ACTN4O43707 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ACTN4O43707 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC21.21■□□□□ 0.99
ACTN4O43707 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
ACTN4O43707 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
ACTN4O43707 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC21.2■□□□□ 0.98
ACTN4O43707 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
ACTN4O43707 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ACTN4O43707 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
ACTN4O43707 AC135050.7-201ENST00000624508 2218 ntBASIC21.2■□□□□ 0.98
ACTN4O43707 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC21.2■□□□□ 0.98
ACTN4O43707 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC21.2■□□□□ 0.98
ACTN4O43707 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC21.2■□□□□ 0.98
ACTN4O43707 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
ACTN4O43707 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
ACTN4O43707 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC21.2■□□□□ 0.98
ACTN4O43707 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC21.2■□□□□ 0.98
ACTN4O43707 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC21.2■□□□□ 0.98
ACTN4O43707 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC21.2■□□□□ 0.98
ACTN4O43707 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC21.2■□□□□ 0.98
ACTN4O43707 NFYC-AS1-201ENST00000606277 1687 ntBASIC21.2■□□□□ 0.98
ACTN4O43707 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
ACTN4O43707 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC21.2■□□□□ 0.98
ACTN4O43707 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC21.2■□□□□ 0.98
ACTN4O43707 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC21.2■□□□□ 0.98
ACTN4O43707 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
ACTN4O43707 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
ACTN4O43707 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
ACTN4O43707 KRT16P1-201ENST00000399124 1418 ntBASIC21.2■□□□□ 0.98
ACTN4O43707 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
ACTN4O43707 KATNBL1P6-202ENST00000562413 1466 ntBASIC21.2■□□□□ 0.98
ACTN4O43707 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ACTN4O43707 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ACTN4O43707 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
ACTN4O43707 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ACTN4O43707 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ACTN4O43707 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ACTN4O43707 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
ACTN4O43707 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
ACTN4O43707 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ACTN4O43707 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ACTN4O43707 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ACTN4O43707 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC21.19■□□□□ 0.98
ACTN4O43707 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ACTN4O43707 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC21.19■□□□□ 0.98
ACTN4O43707 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
ACTN4O43707 AF186192.3-201ENST00000583427 947 ntBASIC21.19■□□□□ 0.98
ACTN4O43707 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ACTN4O43707 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC21.19■□□□□ 0.98
ACTN4O43707 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ACTN4O43707 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ACTN4O43707 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
ACTN4O43707 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
ACTN4O43707 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC21.19■□□□□ 0.98
ACTN4O43707 KRT8P32-201ENST00000512863 1461 ntBASIC21.19■□□□□ 0.98
ACTN4O43707 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
ACTN4O43707 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
ACTN4O43707 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
ACTN4O43707 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC21.19■□□□□ 0.98
ACTN4O43707 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ACTN4O43707 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC21.18■□□□□ 0.98
ACTN4O43707 AC004951.3-201ENST00000418645 1148 ntBASIC21.18■□□□□ 0.98
ACTN4O43707 AL353807.1-201ENST00000427475 662 ntBASIC21.18■□□□□ 0.98
ACTN4O43707 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
ACTN4O43707 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ACTN4O43707 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
ACTN4O43707 RARRES2P10-201ENST00000564312 460 ntBASIC21.18■□□□□ 0.98
ACTN4O43707 AL359736.2-201ENST00000621992 437 ntBASIC21.18■□□□□ 0.98
ACTN4O43707 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC21.18■□□□□ 0.98
ACTN4O43707 COMP-202ENST00000425807 2292 ntTSL 2 BASIC21.18■□□□□ 0.98
ACTN4O43707 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC21.18■□□□□ 0.98
ACTN4O43707 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC21.18■□□□□ 0.98
ACTN4O43707 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC21.18■□□□□ 0.98
ACTN4O43707 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ACTN4O43707 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ACTN4O43707 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC21.18■□□□□ 0.98
ACTN4O43707 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC21.18■□□□□ 0.98
ACTN4O43707 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
ACTN4O43707 EFTUD1P1-204ENST00000560401 1798 ntBASIC21.18■□□□□ 0.98
ACTN4O43707 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ACTN4O43707 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
ACTN4O43707 BICD1-207ENST00000551848 1962 ntBASIC21.17■□□□□ 0.98
ACTN4O43707 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ACTN4O43707 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ACTN4O43707 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
ACTN4O43707 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ACTN4O43707 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ACTN4O43707 AC007613.1-201ENST00000572811 2597 ntBASIC21.17■□□□□ 0.98
ACTN4O43707 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ACTN4O43707 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ACTN4O43707 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC21.17■□□□□ 0.98
ACTN4O43707 AC026271.3-201ENST00000571884 352 ntBASIC21.17■□□□□ 0.98
ACTN4O43707 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
ACTN4O43707 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC21.17■□□□□ 0.98
ACTN4O43707 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ACTN4O43707 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC21.17■□□□□ 0.98
ACTN4O43707 CR392000.1-201ENST00000624770 1228 ntBASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms