Protein–RNA interactions for Protein: O43638

FOXS1, Forkhead box protein S1, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXS1O43638 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
FOXS1O43638 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
FOXS1O43638 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
FOXS1O43638 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
FOXS1O43638 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17.78■□□□□ 0.44
FOXS1O43638 MIR1224-201ENST00000408193 85 ntBASIC17.78■□□□□ 0.44
FOXS1O43638 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
FOXS1O43638 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC17.78■□□□□ 0.44
FOXS1O43638 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
FOXS1O43638 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
FOXS1O43638 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
FOXS1O43638 DUX4L26-201ENST00000489078 1255 ntBASIC17.78■□□□□ 0.44
FOXS1O43638 COX11P1-201ENST00000489116 835 ntBASIC17.78■□□□□ 0.44
FOXS1O43638 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC17.78■□□□□ 0.44
FOXS1O43638 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC17.78■□□□□ 0.44
FOXS1O43638 MIR3180-5-201ENST00000583743 153 ntBASIC17.78■□□□□ 0.44
FOXS1O43638 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
FOXS1O43638 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC17.78■□□□□ 0.44
FOXS1O43638 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
FOXS1O43638 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
FOXS1O43638 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
FOXS1O43638 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.78■□□□□ 0.44
FOXS1O43638 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC17.78■□□□□ 0.44
FOXS1O43638 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
FOXS1O43638 AC036111.1-201ENST00000533973 1582 ntBASIC17.78■□□□□ 0.44
FOXS1O43638 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
FOXS1O43638 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
FOXS1O43638 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
FOXS1O43638 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
FOXS1O43638 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
FOXS1O43638 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
FOXS1O43638 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
FOXS1O43638 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
FOXS1O43638 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.77■□□□□ 0.44
FOXS1O43638 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC17.77■□□□□ 0.44
FOXS1O43638 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
FOXS1O43638 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.77■□□□□ 0.44
FOXS1O43638 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
FOXS1O43638 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
FOXS1O43638 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
FOXS1O43638 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
FOXS1O43638 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
FOXS1O43638 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
FOXS1O43638 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
FOXS1O43638 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
FOXS1O43638 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.77■□□□□ 0.44
FOXS1O43638 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC17.77■□□□□ 0.44
FOXS1O43638 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC17.77■□□□□ 0.44
FOXS1O43638 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC17.77■□□□□ 0.44
FOXS1O43638 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
FOXS1O43638 AC068587.9-201ENST00000641814 219 ntBASIC17.77■□□□□ 0.44
FOXS1O43638 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
FOXS1O43638 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
FOXS1O43638 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
FOXS1O43638 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
FOXS1O43638 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
FOXS1O43638 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.77■□□□□ 0.43
FOXS1O43638 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
FOXS1O43638 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
FOXS1O43638 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC17.76■□□□□ 0.43
FOXS1O43638 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
FOXS1O43638 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
FOXS1O43638 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
FOXS1O43638 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
FOXS1O43638 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
FOXS1O43638 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
FOXS1O43638 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
FOXS1O43638 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
FOXS1O43638 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
FOXS1O43638 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
FOXS1O43638 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
FOXS1O43638 AK4P3-201ENST00000418260 669 ntBASIC17.76■□□□□ 0.43
FOXS1O43638 YBX1P2-201ENST00000489612 999 ntBASIC17.76■□□□□ 0.43
FOXS1O43638 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC17.76■□□□□ 0.43
FOXS1O43638 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC17.76■□□□□ 0.43
FOXS1O43638 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC17.76■□□□□ 0.43
FOXS1O43638 AC010331.1-201ENST00000611423 582 ntBASIC17.76■□□□□ 0.43
FOXS1O43638 AC011558.1-201ENST00000623459 338 ntBASIC17.76■□□□□ 0.43
FOXS1O43638 AL023973.1-201ENST00000624619 620 ntBASIC17.76■□□□□ 0.43
FOXS1O43638 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC17.76■□□□□ 0.43
FOXS1O43638 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
FOXS1O43638 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
FOXS1O43638 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC17.76■□□□□ 0.43
FOXS1O43638 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.76■□□□□ 0.43
FOXS1O43638 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
FOXS1O43638 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
FOXS1O43638 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
FOXS1O43638 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
FOXS1O43638 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
FOXS1O43638 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.75■□□□□ 0.43
FOXS1O43638 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
FOXS1O43638 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.75■□□□□ 0.43
FOXS1O43638 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
FOXS1O43638 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
FOXS1O43638 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.75■□□□□ 0.43
FOXS1O43638 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
FOXS1O43638 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC17.75■□□□□ 0.43
FOXS1O43638 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
FOXS1O43638 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
FOXS1O43638 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms