Protein–RNA interactions for Protein: O43307

ARHGEF9, Rho guanine nucleotide exchange factor 9, humanhuman

Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF9O43307 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ARHGEF9O43307 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ARHGEF9O43307 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ARHGEF9O43307 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ARHGEF9O43307 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ARHGEF9O43307 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
ARHGEF9O43307 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ARHGEF9O43307 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
ARHGEF9O43307 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC17.51■□□□□ 0.39
ARHGEF9O43307 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC17.51■□□□□ 0.39
ARHGEF9O43307 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ARHGEF9O43307 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ARHGEF9O43307 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
ARHGEF9O43307 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ARHGEF9O43307 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC17.5■□□□□ 0.39
ARHGEF9O43307 Z82202.1-201ENST00000623446 1880 ntBASIC17.5■□□□□ 0.39
ARHGEF9O43307 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
ARHGEF9O43307 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ARHGEF9O43307 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ARHGEF9O43307 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
ARHGEF9O43307 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
ARHGEF9O43307 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
ARHGEF9O43307 AC093503.3-201ENST00000624917 2352 ntBASIC17.5■□□□□ 0.39
ARHGEF9O43307 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ARHGEF9O43307 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC17.5■□□□□ 0.39
ARHGEF9O43307 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ARHGEF9O43307 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ARHGEF9O43307 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ARHGEF9O43307 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC17.5■□□□□ 0.39
ARHGEF9O43307 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ARHGEF9O43307 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
ARHGEF9O43307 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC17.5■□□□□ 0.39
ARHGEF9O43307 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ARHGEF9O43307 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC17.5■□□□□ 0.39
ARHGEF9O43307 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ARHGEF9O43307 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC17.5■□□□□ 0.39
ARHGEF9O43307 SOX15-203ENST00000570788 1093 ntBASIC17.5■□□□□ 0.39
ARHGEF9O43307 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC17.5■□□□□ 0.39
ARHGEF9O43307 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
ARHGEF9O43307 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ARHGEF9O43307 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ARHGEF9O43307 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
ARHGEF9O43307 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
ARHGEF9O43307 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ARHGEF9O43307 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17.5■□□□□ 0.39
ARHGEF9O43307 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
ARHGEF9O43307 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC17.5■□□□□ 0.39
ARHGEF9O43307 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.5■□□□□ 0.39
ARHGEF9O43307 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.5■□□□□ 0.39
ARHGEF9O43307 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ARHGEF9O43307 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ARHGEF9O43307 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
ARHGEF9O43307 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ARHGEF9O43307 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
ARHGEF9O43307 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
ARHGEF9O43307 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
ARHGEF9O43307 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
ARHGEF9O43307 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ARHGEF9O43307 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ARHGEF9O43307 AL032819.2-201ENST00000624543 2162 ntBASIC17.49■□□□□ 0.39
ARHGEF9O43307 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ARHGEF9O43307 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ARHGEF9O43307 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
ARHGEF9O43307 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
ARHGEF9O43307 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
ARHGEF9O43307 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ARHGEF9O43307 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ARHGEF9O43307 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
ARHGEF9O43307 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC17.49■□□□□ 0.39
ARHGEF9O43307 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC17.49■□□□□ 0.39
ARHGEF9O43307 RPS20-210ENST00000523936 899 ntTSL 2 BASIC17.49■□□□□ 0.39
ARHGEF9O43307 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
ARHGEF9O43307 AC069544.1-201ENST00000609399 999 ntBASIC17.49■□□□□ 0.39
ARHGEF9O43307 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
ARHGEF9O43307 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
ARHGEF9O43307 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
ARHGEF9O43307 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
ARHGEF9O43307 AC124283.5-201ENST00000624661 1809 ntBASIC17.49■□□□□ 0.39
ARHGEF9O43307 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ARHGEF9O43307 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
ARHGEF9O43307 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
ARHGEF9O43307 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.48■□□□□ 0.39
ARHGEF9O43307 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC17.48■□□□□ 0.39
ARHGEF9O43307 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC17.48■□□□□ 0.39
ARHGEF9O43307 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ARHGEF9O43307 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ARHGEF9O43307 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
ARHGEF9O43307 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ARHGEF9O43307 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
ARHGEF9O43307 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ARHGEF9O43307 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ARHGEF9O43307 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
ARHGEF9O43307 AC012618.2-201ENST00000428058 849 ntBASIC17.48■□□□□ 0.39
ARHGEF9O43307 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
ARHGEF9O43307 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
ARHGEF9O43307 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
ARHGEF9O43307 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC17.48■□□□□ 0.39
ARHGEF9O43307 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
ARHGEF9O43307 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ARHGEF9O43307 AC079598.2-202ENST00000546624 1451 ntBASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms