Protein–RNA interactions for Protein: O15417

TNRC18, Trinucleotide repeat-containing gene 18 protein, humanhuman

Predicted RBP Predictions only

Length 2,968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18O15417 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TNRC18O15417 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TNRC18O15417 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TNRC18O15417 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC20.57■□□□□ 0.88
TNRC18O15417 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC20.57■□□□□ 0.88
TNRC18O15417 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC20.57■□□□□ 0.88
TNRC18O15417 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC20.57■□□□□ 0.88
TNRC18O15417 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC20.57■□□□□ 0.88
TNRC18O15417 AC114341.1-201ENST00000618070 349 ntBASIC20.57■□□□□ 0.88
TNRC18O15417 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TNRC18O15417 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.57■□□□□ 0.88
TNRC18O15417 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.57■□□□□ 0.88
TNRC18O15417 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
TNRC18O15417 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
TNRC18O15417 KIRREL3-AS3-201ENST00000404882 831 ntBASIC20.57■□□□□ 0.88
TNRC18O15417 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TNRC18O15417 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC20.57■□□□□ 0.88
TNRC18O15417 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TNRC18O15417 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TNRC18O15417 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TNRC18O15417 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
TNRC18O15417 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.56■□□□□ 0.88
TNRC18O15417 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TNRC18O15417 THAP5-204ENST00000438865 868 ntTSL 2 BASIC20.56■□□□□ 0.88
TNRC18O15417 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC20.56■□□□□ 0.88
TNRC18O15417 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TNRC18O15417 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TNRC18O15417 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
TNRC18O15417 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.56■□□□□ 0.88
TNRC18O15417 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TNRC18O15417 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC20.56■□□□□ 0.88
TNRC18O15417 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC20.55■□□□□ 0.88
TNRC18O15417 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TNRC18O15417 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TNRC18O15417 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.55■□□□□ 0.88
TNRC18O15417 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TNRC18O15417 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC20.55■□□□□ 0.88
TNRC18O15417 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC20.55■□□□□ 0.88
TNRC18O15417 AP003733.1-201ENST00000491725 852 ntBASIC20.55■□□□□ 0.88
TNRC18O15417 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC20.55■□□□□ 0.88
TNRC18O15417 TEN1-204ENST00000588202 862 ntTSL 3 BASIC20.55■□□□□ 0.88
TNRC18O15417 AL078644.1-201ENST00000609881 752 ntBASIC20.55■□□□□ 0.88
TNRC18O15417 MED16-201ENST00000269814 1199 ntTSL 5 BASIC20.55■□□□□ 0.88
TNRC18O15417 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
TNRC18O15417 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
TNRC18O15417 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC20.55■□□□□ 0.88
TNRC18O15417 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC20.55■□□□□ 0.88
TNRC18O15417 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC20.55■□□□□ 0.88
TNRC18O15417 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
TNRC18O15417 GOLGA6L17P-202ENST00000614358 1398 ntBASIC20.55■□□□□ 0.88
TNRC18O15417 AC079834.2-201ENST00000609776 1949 ntBASIC20.54■□□□□ 0.88
TNRC18O15417 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.54■□□□□ 0.88
TNRC18O15417 DPP3P2-201ENST00000416030 1696 ntBASIC20.54■□□□□ 0.88
TNRC18O15417 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
TNRC18O15417 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TNRC18O15417 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
TNRC18O15417 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
TNRC18O15417 AC008735.5-201ENST00000623544 497 ntBASIC20.54■□□□□ 0.88
TNRC18O15417 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
TNRC18O15417 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TNRC18O15417 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC20.54■□□□□ 0.88
TNRC18O15417 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TNRC18O15417 AP005117.1-201ENST00000584346 1413 ntBASIC20.54■□□□□ 0.88
TNRC18O15417 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TNRC18O15417 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC20.54■□□□□ 0.88
TNRC18O15417 AC069262.1-201ENST00000539058 672 ntBASIC20.54■□□□□ 0.88
TNRC18O15417 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
TNRC18O15417 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
TNRC18O15417 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
TNRC18O15417 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TNRC18O15417 AC009947.1-201ENST00000444350 727 ntBASIC20.53■□□□□ 0.88
TNRC18O15417 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC20.53■□□□□ 0.88
TNRC18O15417 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC20.53■□□□□ 0.88
TNRC18O15417 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC20.53■□□□□ 0.88
TNRC18O15417 AC092902.6-201ENST00000641783 218 ntBASIC20.53■□□□□ 0.88
TNRC18O15417 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
TNRC18O15417 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
TNRC18O15417 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC20.53■□□□□ 0.88
TNRC18O15417 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC20.53■□□□□ 0.88
TNRC18O15417 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC20.53■□□□□ 0.88
TNRC18O15417 AP005018.1-201ENST00000525475 301 ntBASIC20.53■□□□□ 0.88
TNRC18O15417 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC20.53■□□□□ 0.88
TNRC18O15417 AC084346.2-201ENST00000607097 949 ntBASIC20.53■□□□□ 0.88
TNRC18O15417 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TNRC18O15417 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
TNRC18O15417 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.53■□□□□ 0.88
TNRC18O15417 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.53■□□□□ 0.88
TNRC18O15417 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
TNRC18O15417 C9orf163-202ENST00000624034 2573 ntBASIC20.52■□□□□ 0.88
TNRC18O15417 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
TNRC18O15417 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC20.52■□□□□ 0.88
TNRC18O15417 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC20.52■□□□□ 0.88
TNRC18O15417 MIR3180-5-201ENST00000583743 153 ntBASIC20.52■□□□□ 0.88
TNRC18O15417 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.52■□□□□ 0.88
TNRC18O15417 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.52■□□□□ 0.88
TNRC18O15417 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TNRC18O15417 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TNRC18O15417 INIP-202ENST00000374236 874 ntTSL 2 BASIC20.52■□□□□ 0.88
TNRC18O15417 ELK2BP-201ENST00000415014 1224 ntBASIC20.52■□□□□ 0.88
TNRC18O15417 AC002472.2-201ENST00000442739 958 ntBASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms