Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TO15178 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.4■□□□□ 0.38
TO15178 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC17.4■□□□□ 0.38
TO15178 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TO15178 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.4■□□□□ 0.38
TO15178 AC007663.1-201ENST00000438948 1240 ntBASIC17.4■□□□□ 0.38
TO15178 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
TO15178 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC17.4■□□□□ 0.38
TO15178 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
TO15178 AC145285.6-201ENST00000604632 637 ntBASIC17.4■□□□□ 0.38
TO15178 AC012306.2-201ENST00000609350 630 ntBASIC17.4■□□□□ 0.38
TO15178 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
TO15178 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TO15178 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TO15178 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
TO15178 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC17.4■□□□□ 0.38
TO15178 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TO15178 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
TO15178 AC026471.1-201ENST00000564629 3026 ntBASIC17.39■□□□□ 0.38
TO15178 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.39■□□□□ 0.38
TO15178 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TO15178 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TO15178 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC17.39■□□□□ 0.37
TO15178 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
TO15178 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TO15178 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TO15178 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TO15178 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TO15178 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TO15178 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC17.39■□□□□ 0.37
TO15178 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC17.39■□□□□ 0.37
TO15178 AC097493.4-201ENST00000641197 219 ntBASIC17.39■□□□□ 0.37
TO15178 AC068587.9-201ENST00000641814 219 ntBASIC17.39■□□□□ 0.37
TO15178 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TO15178 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TO15178 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
TO15178 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.39■□□□□ 0.37
TO15178 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TO15178 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC17.39■□□□□ 0.37
TO15178 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC17.39■□□□□ 0.37
TO15178 AC018445.3-201ENST00000624177 1945 ntBASIC17.39■□□□□ 0.37
TO15178 LINC01568-207ENST00000641790 1380 ntBASIC17.39■□□□□ 0.37
TO15178 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TO15178 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TO15178 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TO15178 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC17.39■□□□□ 0.37
TO15178 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
TO15178 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TO15178 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TO15178 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
TO15178 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TO15178 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.38■□□□□ 0.37
TO15178 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
TO15178 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
TO15178 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
TO15178 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC17.38■□□□□ 0.37
TO15178 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TO15178 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TO15178 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC17.38■□□□□ 0.37
TO15178 AP003041.3-201ENST00000527151 707 ntBASIC17.38■□□□□ 0.37
TO15178 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
TO15178 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TO15178 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TO15178 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC17.38■□□□□ 0.37
TO15178 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TO15178 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TO15178 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
TO15178 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.38■□□□□ 0.37
TO15178 KRT18P22-201ENST00000402024 1347 ntBASIC17.38■□□□□ 0.37
TO15178 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC17.38■□□□□ 0.37
TO15178 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TO15178 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
TO15178 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
TO15178 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TO15178 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
TO15178 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TO15178 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TO15178 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
TO15178 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
TO15178 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TO15178 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.37■□□□□ 0.37
TO15178 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.37■□□□□ 0.37
TO15178 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC17.37■□□□□ 0.37
TO15178 AC006333.2-201ENST00000607957 2099 ntBASIC17.37■□□□□ 0.37
TO15178 AL109659.2-201ENST00000606809 1674 ntBASIC17.37■□□□□ 0.37
TO15178 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TO15178 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TO15178 AL023284.2-201ENST00000405850 579 ntBASIC17.37■□□□□ 0.37
TO15178 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC17.37■□□□□ 0.37
TO15178 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TO15178 GXYLT1P6-201ENST00000456472 1187 ntBASIC17.37■□□□□ 0.37
TO15178 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC17.37■□□□□ 0.37
TO15178 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC17.37■□□□□ 0.37
TO15178 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC17.37■□□□□ 0.37
TO15178 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC17.37■□□□□ 0.37
TO15178 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC17.37■□□□□ 0.37
TO15178 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TO15178 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
TO15178 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC17.37■□□□□ 0.37
TO15178 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms