Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLDN4O14493 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN4O14493 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
CLDN4O14493 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN4O14493 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN4O14493 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC17.8■□□□□ 0.44
CLDN4O14493 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN4O14493 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN4O14493 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
CLDN4O14493 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN4O14493 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN4O14493 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC17.8■□□□□ 0.44
CLDN4O14493 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC17.8■□□□□ 0.44
CLDN4O14493 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC17.8■□□□□ 0.44
CLDN4O14493 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC17.8■□□□□ 0.44
CLDN4O14493 AL353719.1-201ENST00000566847 864 ntBASIC17.8■□□□□ 0.44
CLDN4O14493 CLN6-221ENST00000637494 765 ntTSL 5 BASIC17.8■□□□□ 0.44
CLDN4O14493 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.8■□□□□ 0.44
CLDN4O14493 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC17.8■□□□□ 0.44
CLDN4O14493 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN4O14493 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
CLDN4O14493 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN4O14493 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN4O14493 AL161938.1-201ENST00000569833 2180 ntBASIC17.8■□□□□ 0.44
CLDN4O14493 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN4O14493 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN4O14493 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN4O14493 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17.8■□□□□ 0.44
CLDN4O14493 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN4O14493 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC17.8■□□□□ 0.44
CLDN4O14493 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN4O14493 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC17.79■□□□□ 0.44
CLDN4O14493 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
CLDN4O14493 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
CLDN4O14493 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC17.79■□□□□ 0.44
CLDN4O14493 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN4O14493 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN4O14493 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC17.79■□□□□ 0.44
CLDN4O14493 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN4O14493 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
CLDN4O14493 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN4O14493 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN4O14493 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC17.79■□□□□ 0.44
CLDN4O14493 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
CLDN4O14493 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC17.79■□□□□ 0.44
CLDN4O14493 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC17.79■□□□□ 0.44
CLDN4O14493 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN4O14493 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC17.79■□□□□ 0.44
CLDN4O14493 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC17.79■□□□□ 0.44
CLDN4O14493 LINC01023-201ENST00000606054 436 ntBASIC17.79■□□□□ 0.44
CLDN4O14493 AL023803.3-201ENST00000615559 522 ntBASIC17.79■□□□□ 0.44
CLDN4O14493 AC010653.2-201ENST00000623505 997 ntBASIC17.79■□□□□ 0.44
CLDN4O14493 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN4O14493 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN4O14493 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN4O14493 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
CLDN4O14493 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN4O14493 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN4O14493 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN4O14493 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC17.78■□□□□ 0.44
CLDN4O14493 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN4O14493 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC17.78■□□□□ 0.44
CLDN4O14493 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
CLDN4O14493 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN4O14493 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN4O14493 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN4O14493 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN4O14493 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN4O14493 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CLDN4O14493 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC17.78■□□□□ 0.44
CLDN4O14493 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN4O14493 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.78■□□□□ 0.44
CLDN4O14493 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN4O14493 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN4O14493 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN4O14493 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN4O14493 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC17.78■□□□□ 0.44
CLDN4O14493 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN4O14493 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC17.78■□□□□ 0.44
CLDN4O14493 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
CLDN4O14493 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN4O14493 AC145285.6-201ENST00000604632 637 ntBASIC17.78■□□□□ 0.44
CLDN4O14493 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN4O14493 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN4O14493 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN4O14493 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
CLDN4O14493 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN4O14493 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN4O14493 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
CLDN4O14493 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN4O14493 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN4O14493 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN4O14493 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLDN4O14493 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CLDN4O14493 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLDN4O14493 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
CLDN4O14493 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
CLDN4O14493 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLDN4O14493 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLDN4O14493 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms