Protein–RNA interactions for Protein: A6NM66

LINC01548, Uncharacterized protein encoded by LINC01548, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01548A6NM66 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC14.91□□□□□ -0.02
LINC01548A6NM66 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LINC01548A6NM66 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
LINC01548A6NM66 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
LINC01548A6NM66 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LINC01548A6NM66 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
LINC01548A6NM66 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC14.91□□□□□ -0.02
LINC01548A6NM66 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
LINC01548A6NM66 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC14.91□□□□□ -0.02
LINC01548A6NM66 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
LINC01548A6NM66 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC14.91□□□□□ -0.02
LINC01548A6NM66 RCN1P1-201ENST00000400413 996 ntBASIC14.91□□□□□ -0.02
LINC01548A6NM66 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC14.91□□□□□ -0.02
LINC01548A6NM66 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC14.91□□□□□ -0.02
LINC01548A6NM66 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC14.91□□□□□ -0.02
LINC01548A6NM66 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC14.91□□□□□ -0.02
LINC01548A6NM66 PPOX-219ENST00000544598 813 ntTSL 2 BASIC14.91□□□□□ -0.02
LINC01548A6NM66 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC14.91□□□□□ -0.02
LINC01548A6NM66 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC14.91□□□□□ -0.02
LINC01548A6NM66 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LINC01548A6NM66 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LINC01548A6NM66 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LINC01548A6NM66 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
LINC01548A6NM66 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LINC01548A6NM66 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LINC01548A6NM66 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LINC01548A6NM66 KRT8P3-201ENST00000519669 1449 ntBASIC14.91□□□□□ -0.02
LINC01548A6NM66 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LINC01548A6NM66 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
LINC01548A6NM66 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC14.91□□□□□ -0.02
LINC01548A6NM66 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC14.91□□□□□ -0.02
LINC01548A6NM66 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LINC01548A6NM66 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
LINC01548A6NM66 GPAT2P1-201ENST00000444924 1672 ntBASIC14.9□□□□□ -0.02
LINC01548A6NM66 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC14.9□□□□□ -0.02
LINC01548A6NM66 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
LINC01548A6NM66 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LINC01548A6NM66 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC14.9□□□□□ -0.02
LINC01548A6NM66 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC14.9□□□□□ -0.02
LINC01548A6NM66 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LINC01548A6NM66 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LINC01548A6NM66 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LINC01548A6NM66 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LINC01548A6NM66 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC14.9□□□□□ -0.02
LINC01548A6NM66 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
LINC01548A6NM66 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC14.9□□□□□ -0.02
LINC01548A6NM66 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
LINC01548A6NM66 KRT18P57-201ENST00000443599 1254 ntBASIC14.9□□□□□ -0.02
LINC01548A6NM66 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LINC01548A6NM66 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC14.9□□□□□ -0.02
LINC01548A6NM66 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC14.9□□□□□ -0.02
LINC01548A6NM66 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC14.9□□□□□ -0.02
LINC01548A6NM66 P4HB-223ENST00000576390 439 ntTSL 4 BASIC14.9□□□□□ -0.02
LINC01548A6NM66 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC14.9□□□□□ -0.02
LINC01548A6NM66 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
LINC01548A6NM66 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
LINC01548A6NM66 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LINC01548A6NM66 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC14.9□□□□□ -0.02
LINC01548A6NM66 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC14.9□□□□□ -0.02
LINC01548A6NM66 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LINC01548A6NM66 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LINC01548A6NM66 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC14.9□□□□□ -0.02
LINC01548A6NM66 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LINC01548A6NM66 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LINC01548A6NM66 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
LINC01548A6NM66 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LINC01548A6NM66 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LINC01548A6NM66 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
LINC01548A6NM66 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC14.9□□□□□ -0.02
LINC01548A6NM66 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LINC01548A6NM66 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
LINC01548A6NM66 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LINC01548A6NM66 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LINC01548A6NM66 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC14.89□□□□□ -0.03
LINC01548A6NM66 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC14.89□□□□□ -0.03
LINC01548A6NM66 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
LINC01548A6NM66 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC14.89□□□□□ -0.03
LINC01548A6NM66 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LINC01548A6NM66 TERF1P1-201ENST00000311003 1181 ntBASIC14.89□□□□□ -0.03
LINC01548A6NM66 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
LINC01548A6NM66 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
LINC01548A6NM66 AC113347.1-201ENST00000413321 391 ntBASIC14.89□□□□□ -0.03
LINC01548A6NM66 AL137013.1-201ENST00000432946 1228 ntBASIC14.89□□□□□ -0.03
LINC01548A6NM66 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC14.89□□□□□ -0.03
LINC01548A6NM66 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC14.89□□□□□ -0.03
LINC01548A6NM66 AC010653.2-201ENST00000623505 997 ntBASIC14.89□□□□□ -0.03
LINC01548A6NM66 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LINC01548A6NM66 KRT8P45-201ENST00000414328 1447 ntBASIC14.89□□□□□ -0.03
LINC01548A6NM66 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
LINC01548A6NM66 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LINC01548A6NM66 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LINC01548A6NM66 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LINC01548A6NM66 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
LINC01548A6NM66 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC14.89□□□□□ -0.03
LINC01548A6NM66 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LINC01548A6NM66 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
LINC01548A6NM66 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
LINC01548A6NM66 KATNBL1P6-202ENST00000562413 1466 ntBASIC14.89□□□□□ -0.03
LINC01548A6NM66 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
LINC01548A6NM66 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms