Protein–RNA interactions for Protein: A6NKN8

PCP4L1, Purkinje cell protein 4-like protein 1, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4L1A6NKN8 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC14.82□□□□□ -0.04
PCP4L1A6NKN8 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PCP4L1A6NKN8 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
PCP4L1A6NKN8 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.82□□□□□ -0.04
PCP4L1A6NKN8 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCP4L1A6NKN8 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCP4L1A6NKN8 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC14.82□□□□□ -0.04
PCP4L1A6NKN8 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCP4L1A6NKN8 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCP4L1A6NKN8 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCP4L1A6NKN8 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCP4L1A6NKN8 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCP4L1A6NKN8 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCP4L1A6NKN8 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCP4L1A6NKN8 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PCP4L1A6NKN8 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC14.82□□□□□ -0.04
PCP4L1A6NKN8 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC14.82□□□□□ -0.04
PCP4L1A6NKN8 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCP4L1A6NKN8 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC14.82□□□□□ -0.04
PCP4L1A6NKN8 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCP4L1A6NKN8 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC14.82□□□□□ -0.04
PCP4L1A6NKN8 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCP4L1A6NKN8 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCP4L1A6NKN8 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
PCP4L1A6NKN8 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCP4L1A6NKN8 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCP4L1A6NKN8 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC14.81□□□□□ -0.04
PCP4L1A6NKN8 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC14.81□□□□□ -0.04
PCP4L1A6NKN8 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.81□□□□□ -0.04
PCP4L1A6NKN8 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCP4L1A6NKN8 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC14.81□□□□□ -0.04
PCP4L1A6NKN8 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCP4L1A6NKN8 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCP4L1A6NKN8 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCP4L1A6NKN8 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCP4L1A6NKN8 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCP4L1A6NKN8 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCP4L1A6NKN8 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
PCP4L1A6NKN8 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
PCP4L1A6NKN8 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC14.81□□□□□ -0.04
PCP4L1A6NKN8 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PCP4L1A6NKN8 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCP4L1A6NKN8 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC14.81□□□□□ -0.04
PCP4L1A6NKN8 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCP4L1A6NKN8 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PCP4L1A6NKN8 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PCP4L1A6NKN8 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCP4L1A6NKN8 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCP4L1A6NKN8 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PCP4L1A6NKN8 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCP4L1A6NKN8 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC14.8□□□□□ -0.04
PCP4L1A6NKN8 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCP4L1A6NKN8 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCP4L1A6NKN8 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCP4L1A6NKN8 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCP4L1A6NKN8 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC14.8□□□□□ -0.04
PCP4L1A6NKN8 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCP4L1A6NKN8 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC14.8□□□□□ -0.04
PCP4L1A6NKN8 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCP4L1A6NKN8 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
PCP4L1A6NKN8 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PCP4L1A6NKN8 POLL-206ENST00000370172 2308 ntTSL 2 BASIC14.8□□□□□ -0.04
PCP4L1A6NKN8 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCP4L1A6NKN8 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
PCP4L1A6NKN8 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC14.8□□□□□ -0.04
PCP4L1A6NKN8 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
PCP4L1A6NKN8 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC14.8□□□□□ -0.04
PCP4L1A6NKN8 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCP4L1A6NKN8 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC14.8□□□□□ -0.04
PCP4L1A6NKN8 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
PCP4L1A6NKN8 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCP4L1A6NKN8 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC14.8□□□□□ -0.04
PCP4L1A6NKN8 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCP4L1A6NKN8 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCP4L1A6NKN8 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
PCP4L1A6NKN8 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCP4L1A6NKN8 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCP4L1A6NKN8 MADD-208ENST00000405573 1823 ntTSL 5 BASIC14.8□□□□□ -0.04
PCP4L1A6NKN8 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
PCP4L1A6NKN8 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCP4L1A6NKN8 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCP4L1A6NKN8 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
PCP4L1A6NKN8 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PCP4L1A6NKN8 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCP4L1A6NKN8 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCP4L1A6NKN8 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCP4L1A6NKN8 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCP4L1A6NKN8 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCP4L1A6NKN8 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCP4L1A6NKN8 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCP4L1A6NKN8 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PCP4L1A6NKN8 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCP4L1A6NKN8 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCP4L1A6NKN8 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PCP4L1A6NKN8 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCP4L1A6NKN8 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCP4L1A6NKN8 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PCP4L1A6NKN8 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC14.79□□□□□ -0.04
PCP4L1A6NKN8 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
PCP4L1A6NKN8 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms