Protein–RNA interactions for Protein: A0A0B4J248

TRAV1-1, T-cell receptor alpha variable 1-1 (Fragment), humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1A0A0B4J248 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC14.77□□□□□ -0.04
TRAV1-1A0A0B4J248 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRAV1-1A0A0B4J248 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRAV1-1A0A0B4J248 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRAV1-1A0A0B4J248 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
TRAV1-1A0A0B4J248 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.04
TRAV1-1A0A0B4J248 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRAV1-1A0A0B4J248 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
TRAV1-1A0A0B4J248 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
TRAV1-1A0A0B4J248 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC14.77□□□□□ -0.04
TRAV1-1A0A0B4J248 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC14.77□□□□□ -0.04
TRAV1-1A0A0B4J248 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRAV1-1A0A0B4J248 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRAV1-1A0A0B4J248 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC14.77□□□□□ -0.05
TRAV1-1A0A0B4J248 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC14.77□□□□□ -0.05
TRAV1-1A0A0B4J248 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
TRAV1-1A0A0B4J248 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
TRAV1-1A0A0B4J248 AP001330.3-201ENST00000520123 633 ntBASIC14.77□□□□□ -0.05
TRAV1-1A0A0B4J248 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC14.77□□□□□ -0.05
TRAV1-1A0A0B4J248 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRAV1-1A0A0B4J248 TFG-210ENST00000620299 1289 ntTSL 5 BASIC14.77□□□□□ -0.05
TRAV1-1A0A0B4J248 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRAV1-1A0A0B4J248 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC14.77□□□□□ -0.05
TRAV1-1A0A0B4J248 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
TRAV1-1A0A0B4J248 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRAV1-1A0A0B4J248 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRAV1-1A0A0B4J248 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRAV1-1A0A0B4J248 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRAV1-1A0A0B4J248 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRAV1-1A0A0B4J248 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRAV1-1A0A0B4J248 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRAV1-1A0A0B4J248 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC14.77□□□□□ -0.05
TRAV1-1A0A0B4J248 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
TRAV1-1A0A0B4J248 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.05
TRAV1-1A0A0B4J248 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC14.77□□□□□ -0.05
TRAV1-1A0A0B4J248 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
TRAV1-1A0A0B4J248 FLJ13224-201ENST00000313737 1514 ntBASIC14.76□□□□□ -0.05
TRAV1-1A0A0B4J248 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV1-1A0A0B4J248 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC14.76□□□□□ -0.05
TRAV1-1A0A0B4J248 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV1-1A0A0B4J248 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC14.76□□□□□ -0.05
TRAV1-1A0A0B4J248 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV1-1A0A0B4J248 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV1-1A0A0B4J248 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC14.76□□□□□ -0.05
TRAV1-1A0A0B4J248 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC14.76□□□□□ -0.05
TRAV1-1A0A0B4J248 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV1-1A0A0B4J248 GCK-205ENST00000437084 1385 ntTSL 5 BASIC14.76□□□□□ -0.05
TRAV1-1A0A0B4J248 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV1-1A0A0B4J248 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV1-1A0A0B4J248 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV1-1A0A0B4J248 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
TRAV1-1A0A0B4J248 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV1-1A0A0B4J248 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV1-1A0A0B4J248 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC14.76□□□□□ -0.05
TRAV1-1A0A0B4J248 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV1-1A0A0B4J248 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV1-1A0A0B4J248 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV1-1A0A0B4J248 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV1-1A0A0B4J248 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV1-1A0A0B4J248 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC14.76□□□□□ -0.05
TRAV1-1A0A0B4J248 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC14.76□□□□□ -0.05
TRAV1-1A0A0B4J248 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC14.76□□□□□ -0.05
TRAV1-1A0A0B4J248 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV1-1A0A0B4J248 GRAMD4P4-201ENST00000613563 1115 ntBASIC14.76□□□□□ -0.05
TRAV1-1A0A0B4J248 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC14.76□□□□□ -0.05
TRAV1-1A0A0B4J248 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV1-1A0A0B4J248 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV1-1A0A0B4J248 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV1-1A0A0B4J248 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV1-1A0A0B4J248 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC14.76□□□□□ -0.05
TRAV1-1A0A0B4J248 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
TRAV1-1A0A0B4J248 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV1-1A0A0B4J248 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV1-1A0A0B4J248 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
TRAV1-1A0A0B4J248 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV1-1A0A0B4J248 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV1-1A0A0B4J248 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV1-1A0A0B4J248 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV1-1A0A0B4J248 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
TRAV1-1A0A0B4J248 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV1-1A0A0B4J248 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV1-1A0A0B4J248 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV1-1A0A0B4J248 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV1-1A0A0B4J248 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV1-1A0A0B4J248 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
TRAV1-1A0A0B4J248 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC14.75□□□□□ -0.05
TRAV1-1A0A0B4J248 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV1-1A0A0B4J248 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV1-1A0A0B4J248 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
TRAV1-1A0A0B4J248 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC14.75□□□□□ -0.05
TRAV1-1A0A0B4J248 KRT18P68-201ENST00000392293 1000 ntBASIC14.75□□□□□ -0.05
TRAV1-1A0A0B4J248 TESC-206ENST00000541210 936 ntTSL 3 BASIC14.75□□□□□ -0.05
TRAV1-1A0A0B4J248 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC14.75□□□□□ -0.05
TRAV1-1A0A0B4J248 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC14.75□□□□□ -0.05
TRAV1-1A0A0B4J248 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
TRAV1-1A0A0B4J248 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV1-1A0A0B4J248 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC14.75□□□□□ -0.05
TRAV1-1A0A0B4J248 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC14.75□□□□□ -0.05
TRAV1-1A0A0B4J248 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV1-1A0A0B4J248 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms