Protein–RNA interactions for Protein: A0A0B4J240

TRAV10, T-cell receptor alpha variable 10 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV10A0A0B4J240 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC13.34□□□□□ -0.27
TRAV10A0A0B4J240 AC008622.2-201ENST00000617006 1229 ntBASIC13.34□□□□□ -0.27
TRAV10A0A0B4J240 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC13.34□□□□□ -0.27
TRAV10A0A0B4J240 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV10A0A0B4J240 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV10A0A0B4J240 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV10A0A0B4J240 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
TRAV10A0A0B4J240 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV10A0A0B4J240 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV10A0A0B4J240 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV10A0A0B4J240 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV10A0A0B4J240 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
TRAV10A0A0B4J240 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
TRAV10A0A0B4J240 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
TRAV10A0A0B4J240 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
TRAV10A0A0B4J240 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV10A0A0B4J240 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV10A0A0B4J240 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV10A0A0B4J240 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
TRAV10A0A0B4J240 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC13.33□□□□□ -0.28
TRAV10A0A0B4J240 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV10A0A0B4J240 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV10A0A0B4J240 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV10A0A0B4J240 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV10A0A0B4J240 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC13.33□□□□□ -0.28
TRAV10A0A0B4J240 GAD2-202ENST00000376248 680 ntTSL 5 BASIC13.33□□□□□ -0.28
TRAV10A0A0B4J240 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV10A0A0B4J240 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC13.33□□□□□ -0.28
TRAV10A0A0B4J240 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC13.33□□□□□ -0.28
TRAV10A0A0B4J240 CLN6-204ENST00000564752 900 ntTSL 3 BASIC13.33□□□□□ -0.28
TRAV10A0A0B4J240 AL441883.1-201ENST00000566170 1045 ntBASIC13.33□□□□□ -0.28
TRAV10A0A0B4J240 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC13.33□□□□□ -0.28
TRAV10A0A0B4J240 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
TRAV10A0A0B4J240 AL121956.5-201ENST00000625261 221 ntBASIC13.33□□□□□ -0.28
TRAV10A0A0B4J240 MYC-208ENST00000641036 567 ntBASIC13.33□□□□□ -0.28
TRAV10A0A0B4J240 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV10A0A0B4J240 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV10A0A0B4J240 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC13.33□□□□□ -0.28
TRAV10A0A0B4J240 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV10A0A0B4J240 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV10A0A0B4J240 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
TRAV10A0A0B4J240 GAS2L1P1-201ENST00000420145 1480 ntBASIC13.33□□□□□ -0.28
TRAV10A0A0B4J240 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV10A0A0B4J240 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
TRAV10A0A0B4J240 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
TRAV10A0A0B4J240 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC13.33□□□□□ -0.28
TRAV10A0A0B4J240 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV10A0A0B4J240 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC13.33□□□□□ -0.28
TRAV10A0A0B4J240 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAV10A0A0B4J240 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV10A0A0B4J240 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV10A0A0B4J240 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV10A0A0B4J240 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV10A0A0B4J240 AC112907.3-201ENST00000577781 2400 ntBASIC13.32□□□□□ -0.28
TRAV10A0A0B4J240 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC13.32□□□□□ -0.28
TRAV10A0A0B4J240 Z82202.1-201ENST00000623446 1880 ntBASIC13.32□□□□□ -0.28
TRAV10A0A0B4J240 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC13.32□□□□□ -0.28
TRAV10A0A0B4J240 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV10A0A0B4J240 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV10A0A0B4J240 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC13.32□□□□□ -0.28
TRAV10A0A0B4J240 AL671277.2-201ENST00000458060 996 ntBASIC13.32□□□□□ -0.28
TRAV10A0A0B4J240 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC13.32□□□□□ -0.28
TRAV10A0A0B4J240 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV10A0A0B4J240 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC13.32□□□□□ -0.28
TRAV10A0A0B4J240 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV10A0A0B4J240 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
TRAV10A0A0B4J240 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC13.32□□□□□ -0.28
TRAV10A0A0B4J240 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC13.32□□□□□ -0.28
TRAV10A0A0B4J240 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV10A0A0B4J240 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC13.32□□□□□ -0.28
TRAV10A0A0B4J240 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC13.32□□□□□ -0.28
TRAV10A0A0B4J240 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC13.32□□□□□ -0.28
TRAV10A0A0B4J240 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC13.32□□□□□ -0.28
TRAV10A0A0B4J240 EML3-217ENST00000531557 2509 ntTSL 5 BASIC13.32□□□□□ -0.28
TRAV10A0A0B4J240 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC13.32□□□□□ -0.28
TRAV10A0A0B4J240 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV10A0A0B4J240 TBC1D3P2-202ENST00000577902 1649 ntBASIC13.31□□□□□ -0.28
TRAV10A0A0B4J240 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
TRAV10A0A0B4J240 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV10A0A0B4J240 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV10A0A0B4J240 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV10A0A0B4J240 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
TRAV10A0A0B4J240 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC13.31□□□□□ -0.28
TRAV10A0A0B4J240 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV10A0A0B4J240 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV10A0A0B4J240 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
TRAV10A0A0B4J240 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC13.31□□□□□ -0.28
TRAV10A0A0B4J240 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV10A0A0B4J240 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
TRAV10A0A0B4J240 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC13.31□□□□□ -0.28
TRAV10A0A0B4J240 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
TRAV10A0A0B4J240 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV10A0A0B4J240 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
TRAV10A0A0B4J240 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV10A0A0B4J240 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV10A0A0B4J240 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV10A0A0B4J240 AL031133.1-201ENST00000406807 723 ntBASIC13.31□□□□□ -0.28
TRAV10A0A0B4J240 DAP-202ENST00000432074 1048 ntTSL 2 BASIC13.31□□□□□ -0.28
TRAV10A0A0B4J240 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC13.31□□□□□ -0.28
TRAV10A0A0B4J240 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms