Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
HRH3Q9Y5N1 MAPK10-322ENST00000641485 4530 ntBASIC3.26□□□□□ -1.89
HRH3Q9Y5N1 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
HRH3Q9Y5N1 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
HRH3Q9Y5N1 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
HRH3Q9Y5N1 PWAR6-201ENST00000552334 4618 ntBASIC3.25□□□□□ -1.89
HRH3Q9Y5N1 RNU6-424P-201ENST00000384367 105 ntBASIC3.25□□□□□ -1.89
HRH3Q9Y5N1 MIR483-201ENST00000385070 76 ntBASIC3.25□□□□□ -1.89
HRH3Q9Y5N1 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
HRH3Q9Y5N1 RNU6-938P-201ENST00000411285 103 ntBASIC3.25□□□□□ -1.89
HRH3Q9Y5N1 AL022718.1-201ENST00000412004 84 ntBASIC3.25□□□□□ -1.89
HRH3Q9Y5N1 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.25□□□□□ -1.89
HRH3Q9Y5N1 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.25□□□□□ -1.89
HRH3Q9Y5N1 AC025518.1-201ENST00000479856 347 ntBASIC3.25□□□□□ -1.89
HRH3Q9Y5N1 RNU6-638P-201ENST00000516582 104 ntBASIC3.25□□□□□ -1.89
HRH3Q9Y5N1 MIR5195-201ENST00000583555 115 ntBASIC3.25□□□□□ -1.89
HRH3Q9Y5N1 MIR3616-201ENST00000584070 92 ntBASIC3.25□□□□□ -1.89
HRH3Q9Y5N1 AL590808.1-201ENST00000618696 141 ntBASIC3.25□□□□□ -1.89
HRH3Q9Y5N1 MIR1245B-201ENST00000636115 69 ntBASIC3.25□□□□□ -1.89
HRH3Q9Y5N1 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
HRH3Q9Y5N1 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.25□□□□□ -1.89
HRH3Q9Y5N1 MAPK10-362ENST00000641864 4484 ntBASIC3.25□□□□□ -1.89
HRH3Q9Y5N1 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
HRH3Q9Y5N1 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
HRH3Q9Y5N1 RNU4-16P-201ENST00000364737 141 ntBASIC3.24□□□□□ -1.89
HRH3Q9Y5N1 Y_RNA.342-201ENST00000365352 113 ntBASIC3.24□□□□□ -1.89
HRH3Q9Y5N1 RNU6-163P-201ENST00000384396 106 ntBASIC3.24□□□□□ -1.89
HRH3Q9Y5N1 SNORA26.7-201ENST00000391288 122 ntBASIC3.24□□□□□ -1.89
HRH3Q9Y5N1 Y_RNA.601-201ENST00000410500 113 ntBASIC3.24□□□□□ -1.89
HRH3Q9Y5N1 RN7SKP200-201ENST00000410564 320 ntBASIC3.24□□□□□ -1.89
HRH3Q9Y5N1 AC003685.2-201ENST00000422795 395 ntBASIC3.24□□□□□ -1.89
HRH3Q9Y5N1 AC018868.1-201ENST00000491307 315 ntBASIC3.24□□□□□ -1.89
HRH3Q9Y5N1 RNU2-35P-201ENST00000516446 142 ntBASIC3.24□□□□□ -1.89
HRH3Q9Y5N1 SNORA28-201ENST00000606769 126 ntBASIC3.24□□□□□ -1.89
HRH3Q9Y5N1 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.24□□□□□ -1.89
HRH3Q9Y5N1 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
HRH3Q9Y5N1 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
HRH3Q9Y5N1 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
HRH3Q9Y5N1 AP006437.1-201ENST00000641440 3685 ntBASIC3.23□□□□□ -1.89
HRH3Q9Y5N1 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
HRH3Q9Y5N1 RNA5SP50-201ENST00000363731 107 ntBASIC3.23□□□□□ -1.89
HRH3Q9Y5N1 Y_RNA.241-201ENST00000364470 117 ntBASIC3.23□□□□□ -1.89
HRH3Q9Y5N1 SNORD21-201ENST00000383953 95 ntBASIC3.23□□□□□ -1.89
HRH3Q9Y5N1 SNORA27-201ENST00000384323 126 ntBASIC3.23□□□□□ -1.89
HRH3Q9Y5N1 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.23□□□□□ -1.89
HRH3Q9Y5N1 RN7SL442P-201ENST00000473804 320 ntBASIC3.23□□□□□ -1.89
HRH3Q9Y5N1 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC3.23□□□□□ -1.89
HRH3Q9Y5N1 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
HRH3Q9Y5N1 MIR3651-201ENST00000630427 90 ntBASIC3.23□□□□□ -1.89
HRH3Q9Y5N1 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC3.23□□□□□ -1.89
HRH3Q9Y5N1 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
HRH3Q9Y5N1 FAM35CP-201ENST00000554755 2470 ntBASIC3.22□□□□□ -1.89
HRH3Q9Y5N1 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.22□□□□□ -1.89
HRH3Q9Y5N1 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
HRH3Q9Y5N1 RNU4-35P-201ENST00000362588 141 ntBASIC3.22□□□□□ -1.89
HRH3Q9Y5N1 Y_RNA.155-201ENST00000363632 101 ntBASIC3.22□□□□□ -1.89
HRH3Q9Y5N1 RNU6-805P-201ENST00000365643 106 ntBASIC3.22□□□□□ -1.89
HRH3Q9Y5N1 RNU6-573P-201ENST00000383938 106 ntBASIC3.22□□□□□ -1.89
HRH3Q9Y5N1 RNU6-220P-201ENST00000390919 107 ntBASIC3.22□□□□□ -1.89
HRH3Q9Y5N1 SNORA48.8-201ENST00000391324 134 ntBASIC3.22□□□□□ -1.89
HRH3Q9Y5N1 RNA5SP293-201ENST00000410527 113 ntBASIC3.22□□□□□ -1.89
HRH3Q9Y5N1 RNA5SP380-201ENST00000517190 98 ntBASIC3.22□□□□□ -1.89
HRH3Q9Y5N1 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.22□□□□□ -1.89
HRH3Q9Y5N1 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
HRH3Q9Y5N1 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
HRH3Q9Y5N1 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
HRH3Q9Y5N1 AC096644.4-201ENST00000563417 2912 ntBASIC3.21□□□□□ -1.9
HRH3Q9Y5N1 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
HRH3Q9Y5N1 MIR494-201ENST00000349529 81 ntBASIC3.21□□□□□ -1.9
HRH3Q9Y5N1 RNU1-33P-201ENST00000364249 162 ntBASIC3.21□□□□□ -1.9
HRH3Q9Y5N1 Y_RNA.299-201ENST00000364973 94 ntBASIC3.21□□□□□ -1.9
HRH3Q9Y5N1 Y_RNA.531-201ENST00000384589 121 ntBASIC3.21□□□□□ -1.9
HRH3Q9Y5N1 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
HRH3Q9Y5N1 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
HRH3Q9Y5N1 SNORD17-201ENST00000390930 237 ntBASIC3.21□□□□□ -1.9
HRH3Q9Y5N1 RNU6-1275P-201ENST00000391087 107 ntBASIC3.21□□□□□ -1.9
HRH3Q9Y5N1 AC115115.1-201ENST00000449927 248 ntBASIC3.21□□□□□ -1.9
HRH3Q9Y5N1 RNU7-96P-201ENST00000459535 64 ntBASIC3.21□□□□□ -1.9
HRH3Q9Y5N1 RNU6ATAC17P-201ENST00000516074 71 ntBASIC3.21□□□□□ -1.9
HRH3Q9Y5N1 Y_RNA.685-201ENST00000516532 108 ntBASIC3.21□□□□□ -1.9
HRH3Q9Y5N1 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.21□□□□□ -1.9
HRH3Q9Y5N1 YPEL5P2-201ENST00000605553 359 ntBASIC3.21□□□□□ -1.9
HRH3Q9Y5N1 AL449363.1-201ENST00000617815 186 ntBASIC3.21□□□□□ -1.9
HRH3Q9Y5N1 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
HRH3Q9Y5N1 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
HRH3Q9Y5N1 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC3.2□□□□□ -1.9
HRH3Q9Y5N1 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC3.2□□□□□ -1.9
HRH3Q9Y5N1 SNORA4.2-201ENST00000365313 147 ntBASIC3.2□□□□□ -1.9
HRH3Q9Y5N1 RNA5SP120-201ENST00000410900 112 ntBASIC3.2□□□□□ -1.9
HRH3Q9Y5N1 TRIAP1P1-201ENST00000427062 225 ntBASIC3.2□□□□□ -1.9
HRH3Q9Y5N1 AC109327.2-201ENST00000448339 378 ntBASIC3.2□□□□□ -1.9
HRH3Q9Y5N1 RNU6-893P-201ENST00000458841 100 ntBASIC3.2□□□□□ -1.9
HRH3Q9Y5N1 RN7SKP57-201ENST00000517248 293 ntBASIC3.2□□□□□ -1.9
HRH3Q9Y5N1 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.2□□□□□ -1.9
HRH3Q9Y5N1 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
HRH3Q9Y5N1 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
HRH3Q9Y5N1 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
HRH3Q9Y5N1 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
HRH3Q9Y5N1 RNU6-661P-201ENST00000362409 107 ntBASIC3.19□□□□□ -1.9
HRH3Q9Y5N1 RNU6-23P-201ENST00000363283 107 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms