Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 AL356280.1-201ENST00000603614 379 ntBASIC3.39□□□□□ -1.87
RTCBQ9Y3I0 UGP2-230ENST00000626380 276 ntTSL 5 BASIC3.39□□□□□ -1.87
RTCBQ9Y3I0 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.38□□□□□ -1.87
RTCBQ9Y3I0 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
RTCBQ9Y3I0 MIRLET7F2-201ENST00000385277 83 ntBASIC3.38□□□□□ -1.87
RTCBQ9Y3I0 RN7SKP192-201ENST00000411291 327 ntBASIC3.38□□□□□ -1.87
RTCBQ9Y3I0 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.38□□□□□ -1.87
RTCBQ9Y3I0 AF228730.3-201ENST00000436691 102 ntBASIC3.38□□□□□ -1.87
RTCBQ9Y3I0 UQCRHP3-201ENST00000451503 251 ntBASIC3.38□□□□□ -1.87
RTCBQ9Y3I0 AC003982.1-202ENST00000469928 248 ntBASIC3.38□□□□□ -1.87
RTCBQ9Y3I0 RN7SKP43-201ENST00000516173 320 ntBASIC3.38□□□□□ -1.87
RTCBQ9Y3I0 AC007229.1-201ENST00000590455 412 ntBASIC3.38□□□□□ -1.87
RTCBQ9Y3I0 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC3.38□□□□□ -1.87
RTCBQ9Y3I0 FAM35CP-201ENST00000554755 2470 ntBASIC3.38□□□□□ -1.87
RTCBQ9Y3I0 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
RTCBQ9Y3I0 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
RTCBQ9Y3I0 RNA5SP289-201ENST00000362332 137 ntBASIC3.37□□□□□ -1.87
RTCBQ9Y3I0 RNU6-1164P-201ENST00000364428 107 ntBASIC3.37□□□□□ -1.87
RTCBQ9Y3I0 Z98742.3-201ENST00000418637 326 ntBASIC3.37□□□□□ -1.87
RTCBQ9Y3I0 AC233266.1-201ENST00000454518 96 ntBASIC3.37□□□□□ -1.87
RTCBQ9Y3I0 AC023141.11-201ENST00000508864 202 ntBASIC3.37□□□□□ -1.87
RTCBQ9Y3I0 MRPS17P9-201ENST00000511924 393 ntBASIC3.37□□□□□ -1.87
RTCBQ9Y3I0 AC011406.1-201ENST00000512440 370 ntBASIC3.37□□□□□ -1.87
RTCBQ9Y3I0 AC245166.1-201ENST00000521012 253 ntBASIC3.37□□□□□ -1.87
RTCBQ9Y3I0 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
RTCBQ9Y3I0 MIR3129-201ENST00000581095 76 ntBASIC3.37□□□□□ -1.87
RTCBQ9Y3I0 AC242852.1-201ENST00000612151 96 ntBASIC3.37□□□□□ -1.87
RTCBQ9Y3I0 AC025166.1-201ENST00000612411 163 ntBASIC3.37□□□□□ -1.87
RTCBQ9Y3I0 AC244015.1-201ENST00000622301 99 ntBASIC3.37□□□□□ -1.87
RTCBQ9Y3I0 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC3.37□□□□□ -1.87
RTCBQ9Y3I0 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
RTCBQ9Y3I0 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC3.37□□□□□ -1.87
RTCBQ9Y3I0 snoU2-30.2-201ENST00000362805 70 ntBASIC3.36□□□□□ -1.87
RTCBQ9Y3I0 RNU6-1292P-201ENST00000383856 107 ntBASIC3.36□□□□□ -1.87
RTCBQ9Y3I0 RNU6-880P-201ENST00000384526 107 ntBASIC3.36□□□□□ -1.87
RTCBQ9Y3I0 RNU2-48P-201ENST00000410694 191 ntBASIC3.36□□□□□ -1.87
RTCBQ9Y3I0 RNU2-63P-201ENST00000410792 194 ntBASIC3.36□□□□□ -1.87
RTCBQ9Y3I0 AC003685.2-201ENST00000422795 395 ntBASIC3.36□□□□□ -1.87
RTCBQ9Y3I0 AL021397.1-201ENST00000451806 248 ntBASIC3.36□□□□□ -1.87
RTCBQ9Y3I0 Y_RNA.651-201ENST00000459380 103 ntBASIC3.36□□□□□ -1.87
RTCBQ9Y3I0 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.36□□□□□ -1.87
RTCBQ9Y3I0 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.36□□□□□ -1.87
RTCBQ9Y3I0 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
RTCBQ9Y3I0 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
RTCBQ9Y3I0 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
RTCBQ9Y3I0 RNU6-1255P-201ENST00000363434 112 ntBASIC3.35□□□□□ -1.87
RTCBQ9Y3I0 Y_RNA.253-201ENST00000364562 112 ntBASIC3.35□□□□□ -1.87
RTCBQ9Y3I0 Y_RNA.309-201ENST00000365046 111 ntBASIC3.35□□□□□ -1.87
RTCBQ9Y3I0 SNORA1-201ENST00000384107 130 ntBASIC3.35□□□□□ -1.87
RTCBQ9Y3I0 RNU4-53P-201ENST00000410828 140 ntBASIC3.35□□□□□ -1.87
RTCBQ9Y3I0 SNRPGP10-201ENST00000432323 225 ntBASIC3.35□□□□□ -1.87
RTCBQ9Y3I0 Y_RNA.649-201ENST00000459077 103 ntBASIC3.35□□□□□ -1.87
RTCBQ9Y3I0 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC3.35□□□□□ -1.87
RTCBQ9Y3I0 AC018630.2-201ENST00000534866 2403 ntBASIC3.35□□□□□ -1.87
RTCBQ9Y3I0 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
RTCBQ9Y3I0 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
RTCBQ9Y3I0 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.35□□□□□ -1.87
RTCBQ9Y3I0 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
RTCBQ9Y3I0 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
RTCBQ9Y3I0 AC093831.2-201ENST00000624393 3427 ntBASIC3.34□□□□□ -1.87
RTCBQ9Y3I0 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
RTCBQ9Y3I0 SNORA12.1-201ENST00000390873 148 ntBASIC3.34□□□□□ -1.87
RTCBQ9Y3I0 RPL21P3-201ENST00000395517 478 ntBASIC3.34□□□□□ -1.87
RTCBQ9Y3I0 RNA5SP320-201ENST00000516263 124 ntBASIC3.34□□□□□ -1.87
RTCBQ9Y3I0 RNU6-1291P-201ENST00000516591 104 ntBASIC3.34□□□□□ -1.87
RTCBQ9Y3I0 AL359075.3-201ENST00000613288 217 ntBASIC3.34□□□□□ -1.87
RTCBQ9Y3I0 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.88
RTCBQ9Y3I0 AC092435.3-201ENST00000565538 3654 ntBASIC3.33□□□□□ -1.88
RTCBQ9Y3I0 MTND5P18-201ENST00000445624 1801 ntBASIC3.33□□□□□ -1.88
RTCBQ9Y3I0 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
RTCBQ9Y3I0 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC3.33□□□□□ -1.88
RTCBQ9Y3I0 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
RTCBQ9Y3I0 Y_RNA.242-201ENST00000364473 110 ntBASIC3.33□□□□□ -1.88
RTCBQ9Y3I0 SNORD24-201ENST00000383884 75 ntBASIC3.33□□□□□ -1.88
RTCBQ9Y3I0 SNORD61-201ENST00000384252 73 ntBASIC3.33□□□□□ -1.88
RTCBQ9Y3I0 MIR548A1-201ENST00000385041 97 ntBASIC3.33□□□□□ -1.88
RTCBQ9Y3I0 MIR561-201ENST00000385216 97 ntBASIC3.33□□□□□ -1.88
RTCBQ9Y3I0 RNU6ATAC37P-201ENST00000408328 131 ntBASIC3.33□□□□□ -1.88
RTCBQ9Y3I0 RNU7-128P-201ENST00000517247 62 ntBASIC3.33□□□□□ -1.88
RTCBQ9Y3I0 AL355297.2-201ENST00000604792 129 ntBASIC3.33□□□□□ -1.88
RTCBQ9Y3I0 U4.3-201ENST00000621047 82 ntBASIC3.33□□□□□ -1.88
RTCBQ9Y3I0 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
RTCBQ9Y3I0 AC008555.8-201ENST00000623602 2168 ntBASIC3.32□□□□□ -1.88
RTCBQ9Y3I0 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
RTCBQ9Y3I0 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
RTCBQ9Y3I0 RNU6-888P-201ENST00000363010 101 ntBASIC3.32□□□□□ -1.88
RTCBQ9Y3I0 MIR27B-201ENST00000385129 97 ntBASIC3.32□□□□□ -1.88
RTCBQ9Y3I0 RNA5SP425-201ENST00000410336 112 ntBASIC3.32□□□□□ -1.88
RTCBQ9Y3I0 RN7SL75P-201ENST00000461926 281 ntBASIC3.32□□□□□ -1.88
RTCBQ9Y3I0 RNA5SP236-201ENST00000516169 116 ntBASIC3.32□□□□□ -1.88
RTCBQ9Y3I0 RNU6-168P-201ENST00000516189 101 ntBASIC3.32□□□□□ -1.88
RTCBQ9Y3I0 RNU6-341P-201ENST00000516973 96 ntBASIC3.32□□□□□ -1.88
RTCBQ9Y3I0 RNU6-1270P-201ENST00000517128 108 ntBASIC3.32□□□□□ -1.88
RTCBQ9Y3I0 RNA5SP380-201ENST00000517190 98 ntBASIC3.32□□□□□ -1.88
RTCBQ9Y3I0 AL358944.1-201ENST00000528537 144 ntBASIC3.32□□□□□ -1.88
RTCBQ9Y3I0 AC008507.4-201ENST00000585464 127 ntBASIC3.32□□□□□ -1.88
RTCBQ9Y3I0 MIR6079-201ENST00000635807 62 ntBASIC3.32□□□□□ -1.88
RTCBQ9Y3I0 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
RTCBQ9Y3I0 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
RTCBQ9Y3I0 SNORD72-201ENST00000390994 80 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms