Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 AL159152.1-201ENST00000635019 2587 ntBASIC2.51□□□□□ -2.01
LRFN3Q9BTN0 SNORD114-7-201ENST00000362520 77 ntBASIC2.51□□□□□ -2.01
LRFN3Q9BTN0 Y_RNA.71-201ENST00000362892 104 ntBASIC2.51□□□□□ -2.01
LRFN3Q9BTN0 RNU6-199P-201ENST00000362954 107 ntBASIC2.51□□□□□ -2.01
LRFN3Q9BTN0 RNU6-271P-201ENST00000363858 105 ntBASIC2.51□□□□□ -2.01
LRFN3Q9BTN0 Y_RNA.542-201ENST00000384641 111 ntBASIC2.51□□□□□ -2.01
LRFN3Q9BTN0 MIR1253-201ENST00000408273 105 ntBASIC2.51□□□□□ -2.01
LRFN3Q9BTN0 AC010154.1-201ENST00000425857 269 ntBASIC2.51□□□□□ -2.01
LRFN3Q9BTN0 AL121914.1-201ENST00000450188 156 ntBASIC2.51□□□□□ -2.01
LRFN3Q9BTN0 SNORA70.12-201ENST00000516084 153 ntBASIC2.51□□□□□ -2.01
LRFN3Q9BTN0 RNU6-1333P-201ENST00000516162 93 ntBASIC2.51□□□□□ -2.01
LRFN3Q9BTN0 AC025647.1-201ENST00000517879 253 ntBASIC2.51□□□□□ -2.01
LRFN3Q9BTN0 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.51□□□□□ -2.01
LRFN3Q9BTN0 MIR5688-201ENST00000580619 83 ntBASIC2.51□□□□□ -2.01
LRFN3Q9BTN0 AC078899.2-201ENST00000595282 212 ntBASIC2.51□□□□□ -2.01
LRFN3Q9BTN0 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.51□□□□□ -2.01
LRFN3Q9BTN0 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
LRFN3Q9BTN0 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
LRFN3Q9BTN0 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
LRFN3Q9BTN0 AC245060.5-201ENST00000610778 3293 ntBASIC2.5□□□□□ -2.01
LRFN3Q9BTN0 RNU1-58P-201ENST00000362413 163 ntBASIC2.5□□□□□ -2.01
LRFN3Q9BTN0 RNU6-23P-201ENST00000363283 107 ntBASIC2.5□□□□□ -2.01
LRFN3Q9BTN0 Y_RNA.229-201ENST00000364347 113 ntBASIC2.5□□□□□ -2.01
LRFN3Q9BTN0 Y_RNA.273-201ENST00000364703 102 ntBASIC2.5□□□□□ -2.01
LRFN3Q9BTN0 RNU6-215P-201ENST00000365169 102 ntBASIC2.5□□□□□ -2.01
LRFN3Q9BTN0 Y_RNA.353-201ENST00000365440 108 ntBASIC2.5□□□□□ -2.01
LRFN3Q9BTN0 Y_RNA.420-201ENST00000384043 110 ntBASIC2.5□□□□□ -2.01
LRFN3Q9BTN0 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.5□□□□□ -2.01
LRFN3Q9BTN0 RNU7-197P-201ENST00000458836 62 ntBASIC2.5□□□□□ -2.01
LRFN3Q9BTN0 RNU6-1211P-201ENST00000459179 105 ntBASIC2.5□□□□□ -2.01
LRFN3Q9BTN0 AC003982.1-202ENST00000469928 248 ntBASIC2.5□□□□□ -2.01
LRFN3Q9BTN0 AC010598.1-201ENST00000510378 103 ntBASIC2.5□□□□□ -2.01
LRFN3Q9BTN0 RNU6-561P-201ENST00000516222 102 ntBASIC2.5□□□□□ -2.01
LRFN3Q9BTN0 RNU6-826P-201ENST00000516827 104 ntBASIC2.5□□□□□ -2.01
LRFN3Q9BTN0 RNU6-1234P-201ENST00000516877 103 ntBASIC2.5□□□□□ -2.01
LRFN3Q9BTN0 RNU1-104P-201ENST00000517280 175 ntBASIC2.5□□□□□ -2.01
LRFN3Q9BTN0 AC112693.2-201ENST00000556538 232 ntBASIC2.5□□□□□ -2.01
LRFN3Q9BTN0 MIR4635-201ENST00000583759 79 ntBASIC2.5□□□□□ -2.01
LRFN3Q9BTN0 AC092881.1-201ENST00000638218 2733 ntBASIC2.5□□□□□ -2.01
LRFN3Q9BTN0 Z82195.2-201ENST00000612348 18351 ntBASIC2.49□□□□□ -2.01
LRFN3Q9BTN0 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
LRFN3Q9BTN0 SNORD115-3-201ENST00000363100 82 ntBASIC2.49□□□□□ -2.01
LRFN3Q9BTN0 U8.7-201ENST00000364940 136 ntBASIC2.49□□□□□ -2.01
LRFN3Q9BTN0 RNU6-407P-201ENST00000365280 104 ntBASIC2.49□□□□□ -2.01
LRFN3Q9BTN0 SNORD116-14-201ENST00000383894 92 ntBASIC2.49□□□□□ -2.01
LRFN3Q9BTN0 SNORD116-17-201ENST00000383929 92 ntBASIC2.49□□□□□ -2.01
LRFN3Q9BTN0 RNU6-144P-201ENST00000383951 107 ntBASIC2.49□□□□□ -2.01
LRFN3Q9BTN0 RNU6-643P-201ENST00000384018 107 ntBASIC2.49□□□□□ -2.01
LRFN3Q9BTN0 SNORD116-15-201ENST00000384445 92 ntBASIC2.49□□□□□ -2.01
LRFN3Q9BTN0 SNORD116-19-201ENST00000384729 92 ntBASIC2.49□□□□□ -2.01
LRFN3Q9BTN0 MIR15B-201ENST00000385045 98 ntBASIC2.49□□□□□ -2.01
LRFN3Q9BTN0 RNA5SP465-201ENST00000391195 109 ntBASIC2.49□□□□□ -2.01
LRFN3Q9BTN0 AL606845.1-201ENST00000404881 255 ntBASIC2.49□□□□□ -2.01
LRFN3Q9BTN0 HMGN2P35-201ENST00000412164 270 ntBASIC2.49□□□□□ -2.01
LRFN3Q9BTN0 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.49□□□□□ -2.01
LRFN3Q9BTN0 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC2.49□□□□□ -2.01
LRFN3Q9BTN0 MIR4724-201ENST00000579485 89 ntBASIC2.49□□□□□ -2.01
LRFN3Q9BTN0 AL359881.1-201ENST00000602916 267 ntBASIC2.49□□□□□ -2.01
LRFN3Q9BTN0 AC012640.5-201ENST00000623897 319 ntBASIC2.49□□□□□ -2.01
LRFN3Q9BTN0 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
LRFN3Q9BTN0 MIR340-201ENST00000362125 95 ntBASIC2.48□□□□□ -2.01
LRFN3Q9BTN0 Y_RNA.124-201ENST00000363339 93 ntBASIC2.48□□□□□ -2.01
LRFN3Q9BTN0 RNA5SP493-201ENST00000364115 91 ntBASIC2.48□□□□□ -2.01
LRFN3Q9BTN0 RNU6-1164P-201ENST00000364428 107 ntBASIC2.48□□□□□ -2.01
LRFN3Q9BTN0 MIR539-201ENST00000365690 78 ntBASIC2.48□□□□□ -2.01
LRFN3Q9BTN0 RNU6-1228P-201ENST00000391014 107 ntBASIC2.48□□□□□ -2.01
LRFN3Q9BTN0 SNORD37.2-201ENST00000391075 66 ntBASIC2.48□□□□□ -2.01
LRFN3Q9BTN0 RNU11-5P-201ENST00000391216 129 ntBASIC2.48□□□□□ -2.01
LRFN3Q9BTN0 RNU6-383P-201ENST00000410864 94 ntBASIC2.48□□□□□ -2.01
LRFN3Q9BTN0 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.48□□□□□ -2.01
LRFN3Q9BTN0 HSPE1P21-201ENST00000438283 308 ntBASIC2.48□□□□□ -2.01
LRFN3Q9BTN0 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC2.48□□□□□ -2.01
LRFN3Q9BTN0 ATP5J2P3-201ENST00000451550 258 ntBASIC2.48□□□□□ -2.01
LRFN3Q9BTN0 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.48□□□□□ -2.01
LRFN3Q9BTN0 AL359821.1-201ENST00000605519 182 ntBASIC2.48□□□□□ -2.01
LRFN3Q9BTN0 SNORD14A-201ENST00000606526 91 ntBASIC2.48□□□□□ -2.01
LRFN3Q9BTN0 AL353149.1-201ENST00000610667 244 ntBASIC2.48□□□□□ -2.01
LRFN3Q9BTN0 ZNF702P-202ENST00000434269 1966 ntBASIC2.48□□□□□ -2.01
LRFN3Q9BTN0 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
LRFN3Q9BTN0 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
LRFN3Q9BTN0 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
LRFN3Q9BTN0 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
LRFN3Q9BTN0 MIR367-201ENST00000362299 68 ntBASIC2.47□□□□□ -2.01
LRFN3Q9BTN0 MIR515-2-201ENST00000384883 83 ntBASIC2.47□□□□□ -2.01
LRFN3Q9BTN0 MIR515-1-201ENST00000384884 83 ntBASIC2.47□□□□□ -2.01
LRFN3Q9BTN0 SNORA17.3-201ENST00000391159 129 ntBASIC2.47□□□□□ -2.01
LRFN3Q9BTN0 HMGN2P39-201ENST00000398005 273 ntBASIC2.47□□□□□ -2.01
LRFN3Q9BTN0 AL355796.1-201ENST00000406706 323 ntBASIC2.47□□□□□ -2.01
LRFN3Q9BTN0 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC2.47□□□□□ -2.01
LRFN3Q9BTN0 AC117454.1-201ENST00000491120 168 ntBASIC2.47□□□□□ -2.01
LRFN3Q9BTN0 AC011406.1-201ENST00000512440 370 ntBASIC2.47□□□□□ -2.01
LRFN3Q9BTN0 RN7SKP43-201ENST00000516173 320 ntBASIC2.47□□□□□ -2.01
LRFN3Q9BTN0 MIR4529-201ENST00000578110 78 ntBASIC2.47□□□□□ -2.01
LRFN3Q9BTN0 AC005786.1-201ENST00000588553 154 ntBASIC2.47□□□□□ -2.01
LRFN3Q9BTN0 AC022202.1-201ENST00000613515 211 ntBASIC2.47□□□□□ -2.01
LRFN3Q9BTN0 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.47□□□□□ -2.01
LRFN3Q9BTN0 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.46□□□□□ -2.02
LRFN3Q9BTN0 RNU6-460P-201ENST00000391158 108 ntBASIC2.46□□□□□ -2.02
LRFN3Q9BTN0 MIR873-201ENST00000401120 77 ntBASIC2.46□□□□□ -2.02
LRFN3Q9BTN0 SNORA11.4-201ENST00000408823 129 ntBASIC2.46□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 179.2 ms