Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 AC004941.2-201ENST00000427009 228 ntBASIC3.85□□□□□ -1.79
RC3H1Q5TC82 RNU6-857P-201ENST00000515893 110 ntBASIC3.85□□□□□ -1.79
RC3H1Q5TC82 RNU6-162P-201ENST00000516228 103 ntBASIC3.85□□□□□ -1.79
RC3H1Q5TC82 AL359075.3-201ENST00000613288 217 ntBASIC3.85□□□□□ -1.79
RC3H1Q5TC82 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
RC3H1Q5TC82 ZNF271P-202ENST00000465539 1970 ntBASIC3.85□□□□□ -1.79
RC3H1Q5TC82 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
RC3H1Q5TC82 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.85□□□□□ -1.79
RC3H1Q5TC82 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
RC3H1Q5TC82 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.84□□□□□ -1.79
RC3H1Q5TC82 AC073325.2-201ENST00000339545 159 ntBASIC3.84□□□□□ -1.79
RC3H1Q5TC82 RNU4-82P-201ENST00000362443 140 ntBASIC3.84□□□□□ -1.79
RC3H1Q5TC82 RNU1-96P-201ENST00000364163 162 ntBASIC3.84□□□□□ -1.79
RC3H1Q5TC82 RNU1-133P-201ENST00000364867 167 ntBASIC3.84□□□□□ -1.79
RC3H1Q5TC82 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
RC3H1Q5TC82 HMGN2P18-201ENST00000450680 270 ntBASIC3.84□□□□□ -1.79
RC3H1Q5TC82 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC3.84□□□□□ -1.79
RC3H1Q5TC82 RNU6-795P-201ENST00000516323 103 ntBASIC3.84□□□□□ -1.79
RC3H1Q5TC82 Y_RNA.714-201ENST00000517065 90 ntBASIC3.84□□□□□ -1.79
RC3H1Q5TC82 MIR4666B-201ENST00000578142 81 ntBASIC3.84□□□□□ -1.79
RC3H1Q5TC82 MIR3683-201ENST00000580847 82 ntBASIC3.84□□□□□ -1.79
RC3H1Q5TC82 MIR5588-201ENST00000581890 63 ntBASIC3.84□□□□□ -1.79
RC3H1Q5TC82 AC012531.4-201ENST00000616509 177 ntBASIC3.84□□□□□ -1.79
RC3H1Q5TC82 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
RC3H1Q5TC82 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
RC3H1Q5TC82 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
RC3H1Q5TC82 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
RC3H1Q5TC82 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC3.83□□□□□ -1.8
RC3H1Q5TC82 Y_RNA.531-201ENST00000384589 121 ntBASIC3.83□□□□□ -1.8
RC3H1Q5TC82 MIR1253-201ENST00000408273 105 ntBASIC3.83□□□□□ -1.8
RC3H1Q5TC82 MIR548O-201ENST00000408583 114 ntBASIC3.83□□□□□ -1.8
RC3H1Q5TC82 RNU6-1077P-201ENST00000410506 102 ntBASIC3.83□□□□□ -1.8
RC3H1Q5TC82 AC010401.1-201ENST00000463867 348 ntBASIC3.83□□□□□ -1.8
RC3H1Q5TC82 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.83□□□□□ -1.8
RC3H1Q5TC82 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.83□□□□□ -1.8
RC3H1Q5TC82 U2.20-201ENST00000613956 192 ntBASIC3.83□□□□□ -1.8
RC3H1Q5TC82 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
RC3H1Q5TC82 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
RC3H1Q5TC82 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
RC3H1Q5TC82 MIR126-201ENST00000362291 85 ntBASIC3.82□□□□□ -1.8
RC3H1Q5TC82 RNU6-170P-201ENST00000362832 104 ntBASIC3.82□□□□□ -1.8
RC3H1Q5TC82 Y_RNA.313-201ENST00000365095 103 ntBASIC3.82□□□□□ -1.8
RC3H1Q5TC82 Y_RNA.507-201ENST00000384500 99 ntBASIC3.82□□□□□ -1.8
RC3H1Q5TC82 RNU6-938P-201ENST00000411285 103 ntBASIC3.82□□□□□ -1.8
RC3H1Q5TC82 AC099677.2-201ENST00000436385 175 ntBASIC3.82□□□□□ -1.8
RC3H1Q5TC82 AC006483.1-201ENST00000487308 313 ntBASIC3.82□□□□□ -1.8
RC3H1Q5TC82 AC113410.1-201ENST00000505029 247 ntBASIC3.82□□□□□ -1.8
RC3H1Q5TC82 RNU2-35P-201ENST00000516446 142 ntBASIC3.82□□□□□ -1.8
RC3H1Q5TC82 RNU6-1291P-201ENST00000516591 104 ntBASIC3.82□□□□□ -1.8
RC3H1Q5TC82 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
RC3H1Q5TC82 MIR4694-201ENST00000578534 80 ntBASIC3.82□□□□□ -1.8
RC3H1Q5TC82 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC3.82□□□□□ -1.8
RC3H1Q5TC82 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
RC3H1Q5TC82 FAS-AS1.2-201ENST00000620386 170 ntBASIC3.82□□□□□ -1.8
RC3H1Q5TC82 AC073476.4-201ENST00000628409 72 ntBASIC3.82□□□□□ -1.8
RC3H1Q5TC82 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.81□□□□□ -1.8
RC3H1Q5TC82 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
RC3H1Q5TC82 AC018630.2-201ENST00000534866 2403 ntBASIC3.81□□□□□ -1.8
RC3H1Q5TC82 MIR30E-201ENST00000362104 92 ntBASIC3.81□□□□□ -1.8
RC3H1Q5TC82 RNU6-24P-201ENST00000384440 107 ntBASIC3.81□□□□□ -1.8
RC3H1Q5TC82 RPL21P3-201ENST00000395517 478 ntBASIC3.81□□□□□ -1.8
RC3H1Q5TC82 RNU6-402P-201ENST00000410678 103 ntBASIC3.81□□□□□ -1.8
RC3H1Q5TC82 AC073261.1-201ENST00000429409 121 ntBASIC3.81□□□□□ -1.8
RC3H1Q5TC82 RNU7-171P-201ENST00000459581 62 ntBASIC3.81□□□□□ -1.8
RC3H1Q5TC82 AC107016.2-201ENST00000547968 190 ntBASIC3.81□□□□□ -1.8
RC3H1Q5TC82 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.81□□□□□ -1.8
RC3H1Q5TC82 AC019288.1-201ENST00000557918 224 ntBASIC3.81□□□□□ -1.8
RC3H1Q5TC82 MIR4765-201ENST00000585007 77 ntBASIC3.81□□□□□ -1.8
RC3H1Q5TC82 MAPK10-362ENST00000641864 4484 ntBASIC3.8□□□□□ -1.8
RC3H1Q5TC82 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
RC3H1Q5TC82 Y_RNA.37-201ENST00000362606 108 ntBASIC3.8□□□□□ -1.8
RC3H1Q5TC82 RNU6-832P-201ENST00000363319 107 ntBASIC3.8□□□□□ -1.8
RC3H1Q5TC82 SNORD115-28-201ENST00000363931 81 ntBASIC3.8□□□□□ -1.8
RC3H1Q5TC82 Y_RNA.437-201ENST00000384113 113 ntBASIC3.8□□□□□ -1.8
RC3H1Q5TC82 SNORD116-22-201ENST00000384430 92 ntBASIC3.8□□□□□ -1.8
RC3H1Q5TC82 MIR577-201ENST00000385196 96 ntBASIC3.8□□□□□ -1.8
RC3H1Q5TC82 RNU11-5P-201ENST00000391216 129 ntBASIC3.8□□□□□ -1.8
RC3H1Q5TC82 RNU6-1186P-201ENST00000410429 97 ntBASIC3.8□□□□□ -1.8
RC3H1Q5TC82 FTH1P12-201ENST00000432137 551 ntBASIC3.8□□□□□ -1.8
RC3H1Q5TC82 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC3.8□□□□□ -1.8
RC3H1Q5TC82 AC139453.2-201ENST00000487255 133 ntBASIC3.8□□□□□ -1.8
RC3H1Q5TC82 AC104984.5-201ENST00000586878 94 ntBASIC3.8□□□□□ -1.8
RC3H1Q5TC82 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.8□□□□□ -1.8
RC3H1Q5TC82 AC087741.2-201ENST00000619415 172 ntBASIC3.8□□□□□ -1.8
RC3H1Q5TC82 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
RC3H1Q5TC82 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
RC3H1Q5TC82 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
RC3H1Q5TC82 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
RC3H1Q5TC82 Y_RNA.440-201ENST00000384120 114 ntBASIC3.79□□□□□ -1.8
RC3H1Q5TC82 MIR802-201ENST00000390235 94 ntBASIC3.79□□□□□ -1.8
RC3H1Q5TC82 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.79□□□□□ -1.8
RC3H1Q5TC82 RPS15AP28-201ENST00000435088 386 ntBASIC3.79□□□□□ -1.8
RC3H1Q5TC82 RPS12P18-201ENST00000442381 270 ntBASIC3.79□□□□□ -1.8
RC3H1Q5TC82 RNA5SP112-201ENST00000515937 99 ntBASIC3.79□□□□□ -1.8
RC3H1Q5TC82 RNU7-99P-201ENST00000516271 62 ntBASIC3.79□□□□□ -1.8
RC3H1Q5TC82 AC006441.5-201ENST00000612680 209 ntBASIC3.79□□□□□ -1.8
RC3H1Q5TC82 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.79□□□□□ -1.8
RC3H1Q5TC82 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.79□□□□□ -1.8
RC3H1Q5TC82 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
RC3H1Q5TC82 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms