Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC3.19□□□□□ -1.9
RARAP10276 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC3.19□□□□□ -1.9
RARAP10276 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
RARAP10276 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
RARAP10276 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
RARAP10276 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
RARAP10276 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
RARAP10276 Y_RNA.198-201ENST00000364013 98 ntBASIC3.18□□□□□ -1.9
RARAP10276 Y_RNA.410-201ENST00000383992 113 ntBASIC3.18□□□□□ -1.9
RARAP10276 MIR802-201ENST00000390235 94 ntBASIC3.18□□□□□ -1.9
RARAP10276 RNA5SP323-201ENST00000391094 133 ntBASIC3.18□□□□□ -1.9
RARAP10276 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC3.18□□□□□ -1.9
RARAP10276 RPL39P34-201ENST00000477141 156 ntBASIC3.18□□□□□ -1.9
RARAP10276 RN7SL504P-201ENST00000494496 287 ntBASIC3.18□□□□□ -1.9
RARAP10276 AC006441.5-201ENST00000612680 209 ntBASIC3.18□□□□□ -1.9
RARAP10276 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
RARAP10276 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
RARAP10276 AC073325.2-201ENST00000339545 159 ntBASIC3.17□□□□□ -1.9
RARAP10276 SNORA63.5-201ENST00000363548 123 ntBASIC3.17□□□□□ -1.9
RARAP10276 SNORD114-6-201ENST00000364393 72 ntBASIC3.17□□□□□ -1.9
RARAP10276 Y_RNA.323-201ENST00000365157 109 ntBASIC3.17□□□□□ -1.9
RARAP10276 SNORA8-201ENST00000384574 139 ntBASIC3.17□□□□□ -1.9
RARAP10276 RNU6-220P-201ENST00000390919 107 ntBASIC3.17□□□□□ -1.9
RARAP10276 RNA5SP274-201ENST00000410484 108 ntBASIC3.17□□□□□ -1.9
RARAP10276 SRIP3-201ENST00000413200 219 ntBASIC3.17□□□□□ -1.9
RARAP10276 ATP5J2P3-201ENST00000451550 258 ntBASIC3.17□□□□□ -1.9
RARAP10276 RPS29P12-201ENST00000460178 152 ntBASIC3.17□□□□□ -1.9
RARAP10276 AP004217.1-201ENST00000480579 346 ntBASIC3.17□□□□□ -1.9
RARAP10276 RN7SL633P-201ENST00000488974 297 ntBASIC3.17□□□□□ -1.9
RARAP10276 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC3.17□□□□□ -1.9
RARAP10276 RNY4P20-201ENST00000516678 93 ntBASIC3.17□□□□□ -1.9
RARAP10276 AC004486.1-201ENST00000546846 233 ntBASIC3.17□□□□□ -1.9
RARAP10276 MIR5004-201ENST00000579078 107 ntBASIC3.17□□□□□ -1.9
RARAP10276 RNU6-94P-201ENST00000607728 107 ntBASIC3.17□□□□□ -1.9
RARAP10276 AC007318.2-201ENST00000620999 243 ntBASIC3.17□□□□□ -1.9
RARAP10276 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.17□□□□□ -1.9
RARAP10276 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
RARAP10276 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
RARAP10276 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.16□□□□□ -1.9
RARAP10276 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.16□□□□□ -1.9
RARAP10276 AL589743.1-201ENST00000551932 2712 ntBASIC3.16□□□□□ -1.9
RARAP10276 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
RARAP10276 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
RARAP10276 Y_RNA.49-201ENST00000362714 112 ntBASIC3.16□□□□□ -1.9
RARAP10276 Y_RNA.99-201ENST00000363138 105 ntBASIC3.16□□□□□ -1.9
RARAP10276 SNORA2.2-201ENST00000365473 135 ntBASIC3.16□□□□□ -1.9
RARAP10276 SNORA51.10-201ENST00000384418 136 ntBASIC3.16□□□□□ -1.9
RARAP10276 SNORA48.8-201ENST00000391324 134 ntBASIC3.16□□□□□ -1.9
RARAP10276 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC3.16□□□□□ -1.9
RARAP10276 RNU1-131P-201ENST00000458943 161 ntBASIC3.16□□□□□ -1.9
RARAP10276 RNU7-94P-201ENST00000459576 63 ntBASIC3.16□□□□□ -1.9
RARAP10276 RNU7-25P-201ENST00000516544 62 ntBASIC3.16□□□□□ -1.9
RARAP10276 MIR4762-201ENST00000585261 75 ntBASIC3.16□□□□□ -1.9
RARAP10276 MIR7111-201ENST00000619751 72 ntBASIC3.16□□□□□ -1.9
RARAP10276 MIR6733-201ENST00000635723 61 ntBASIC3.16□□□□□ -1.9
RARAP10276 MAPK10-266ENST00000641066 6555 ntBASIC3.16□□□□□ -1.9
RARAP10276 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
RARAP10276 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC3.15□□□□□ -1.9
RARAP10276 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.9
RARAP10276 SNORD68-201ENST00000363214 84 ntBASIC3.15□□□□□ -1.91
RARAP10276 RNU6-690P-201ENST00000365242 106 ntBASIC3.15□□□□□ -1.91
RARAP10276 RNU6-1189P-201ENST00000383958 107 ntBASIC3.15□□□□□ -1.91
RARAP10276 RNU6-442P-201ENST00000383968 104 ntBASIC3.15□□□□□ -1.91
RARAP10276 SNORA54-201ENST00000384281 123 ntBASIC3.15□□□□□ -1.91
RARAP10276 MIR515-2-201ENST00000384883 83 ntBASIC3.15□□□□□ -1.91
RARAP10276 MIR515-1-201ENST00000384884 83 ntBASIC3.15□□□□□ -1.91
RARAP10276 AC003685.2-201ENST00000422795 395 ntBASIC3.15□□□□□ -1.91
RARAP10276 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.15□□□□□ -1.91
RARAP10276 RN7SL636P-201ENST00000497504 294 ntBASIC3.15□□□□□ -1.91
RARAP10276 RNU6-237P-201ENST00000515985 71 ntBASIC3.15□□□□□ -1.91
RARAP10276 RNA5SP281-201ENST00000516504 135 ntBASIC3.15□□□□□ -1.91
RARAP10276 AC024995.1-201ENST00000523014 93 ntBASIC3.15□□□□□ -1.91
RARAP10276 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.15□□□□□ -1.91
RARAP10276 YPEL5P2-201ENST00000605553 359 ntBASIC3.15□□□□□ -1.91
RARAP10276 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
RARAP10276 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.15□□□□□ -1.91
RARAP10276 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
RARAP10276 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
RARAP10276 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
RARAP10276 MIR22-201ENST00000362190 85 ntBASIC3.14□□□□□ -1.91
RARAP10276 RNU6-349P-201ENST00000362402 107 ntBASIC3.14□□□□□ -1.91
RARAP10276 SNORD115-28-201ENST00000363931 81 ntBASIC3.14□□□□□ -1.91
RARAP10276 Y_RNA.213-201ENST00000364178 111 ntBASIC3.14□□□□□ -1.91
RARAP10276 U8.5-201ENST00000364528 136 ntBASIC3.14□□□□□ -1.91
RARAP10276 U8.6-201ENST00000364939 135 ntBASIC3.14□□□□□ -1.91
RARAP10276 SNORA25B-201ENST00000365507 128 ntBASIC3.14□□□□□ -1.91
RARAP10276 Y_RNA.362-201ENST00000365518 110 ntBASIC3.14□□□□□ -1.91
RARAP10276 SNORA48.2-201ENST00000390926 124 ntBASIC3.14□□□□□ -1.91
RARAP10276 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.14□□□□□ -1.91
RARAP10276 TRIAP1P1-201ENST00000427062 225 ntBASIC3.14□□□□□ -1.91
RARAP10276 SNRPGP14-201ENST00000435400 219 ntBASIC3.14□□□□□ -1.91
RARAP10276 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC3.14□□□□□ -1.91
RARAP10276 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.14□□□□□ -1.91
RARAP10276 ZNF720P1-201ENST00000562403 1939 ntBASIC3.14□□□□□ -1.91
RARAP10276 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
RARAP10276 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
RARAP10276 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
RARAP10276 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
RARAP10276 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.13□□□□□ -1.91
RARAP10276 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 118.7 ms