Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 OTUD4P1-201ENST00000237841 3067 ntBASIC3.81□□□□□ -1.8
SCUBE3Q8IX30 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.81□□□□□ -1.8
SCUBE3Q8IX30 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
SCUBE3Q8IX30 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.8□□□□□ -1.8
SCUBE3Q8IX30 SNORD9-201ENST00000362566 104 ntBASIC3.8□□□□□ -1.8
SCUBE3Q8IX30 RNU6-219P-201ENST00000364728 107 ntBASIC3.8□□□□□ -1.8
SCUBE3Q8IX30 Y_RNA.299-201ENST00000364973 94 ntBASIC3.8□□□□□ -1.8
SCUBE3Q8IX30 Y_RNA.426-201ENST00000384068 113 ntBASIC3.8□□□□□ -1.8
SCUBE3Q8IX30 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.8□□□□□ -1.8
SCUBE3Q8IX30 SNX2P2-201ENST00000424553 323 ntBASIC3.8□□□□□ -1.8
SCUBE3Q8IX30 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.8□□□□□ -1.8
SCUBE3Q8IX30 HMGN2P7-201ENST00000456186 273 ntBASIC3.8□□□□□ -1.8
SCUBE3Q8IX30 AL513534.2-201ENST00000603836 250 ntBASIC3.8□□□□□ -1.8
SCUBE3Q8IX30 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SCUBE3Q8IX30 AC008264.2-201ENST00000610193 3731 ntBASIC3.8□□□□□ -1.8
SCUBE3Q8IX30 AC091564.4-201ENST00000533934 2194 ntBASIC3.8□□□□□ -1.8
SCUBE3Q8IX30 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SCUBE3Q8IX30 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SCUBE3Q8IX30 SNORD115-13-201ENST00000363358 82 ntBASIC3.79□□□□□ -1.8
SCUBE3Q8IX30 SNORD115-16-201ENST00000363887 82 ntBASIC3.79□□□□□ -1.8
SCUBE3Q8IX30 SNORD115-1-201ENST00000364961 82 ntBASIC3.79□□□□□ -1.8
SCUBE3Q8IX30 RNU6-1077P-201ENST00000410506 102 ntBASIC3.79□□□□□ -1.8
SCUBE3Q8IX30 ATP5A1P2-201ENST00000412323 255 ntBASIC3.79□□□□□ -1.8
SCUBE3Q8IX30 AL035398.1-201ENST00000430869 322 ntBASIC3.79□□□□□ -1.8
SCUBE3Q8IX30 AC139453.2-201ENST00000487255 133 ntBASIC3.79□□□□□ -1.8
SCUBE3Q8IX30 AC104619.4-201ENST00000510773 249 ntBASIC3.79□□□□□ -1.8
SCUBE3Q8IX30 SCARNA11.3-201ENST00000517276 130 ntBASIC3.79□□□□□ -1.8
SCUBE3Q8IX30 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.79□□□□□ -1.8
SCUBE3Q8IX30 AC012531.5-201ENST00000611375 151 ntBASIC3.79□□□□□ -1.8
SCUBE3Q8IX30 MIR5739-201ENST00000619803 80 ntBASIC3.79□□□□□ -1.8
SCUBE3Q8IX30 MIR3651-201ENST00000630427 90 ntBASIC3.79□□□□□ -1.8
SCUBE3Q8IX30 AC091304.10-201ENST00000641554 121 ntBASIC3.79□□□□□ -1.8
SCUBE3Q8IX30 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC3.79□□□□□ -1.8
SCUBE3Q8IX30 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SCUBE3Q8IX30 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SCUBE3Q8IX30 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SCUBE3Q8IX30 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
SCUBE3Q8IX30 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.78□□□□□ -1.8
SCUBE3Q8IX30 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.78□□□□□ -1.8
SCUBE3Q8IX30 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SCUBE3Q8IX30 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SCUBE3Q8IX30 Y_RNA.95-201ENST00000363079 95 ntBASIC3.78□□□□□ -1.8
SCUBE3Q8IX30 SNORA80E-201ENST00000384744 137 ntBASIC3.78□□□□□ -1.8
SCUBE3Q8IX30 RNU6-887P-201ENST00000410660 100 ntBASIC3.78□□□□□ -1.8
SCUBE3Q8IX30 RHEBP3-201ENST00000411920 351 ntBASIC3.78□□□□□ -1.8
SCUBE3Q8IX30 AL357552.1-201ENST00000445254 415 ntBASIC3.78□□□□□ -1.8
SCUBE3Q8IX30 CYCSP35-201ENST00000451978 304 ntBASIC3.78□□□□□ -1.8
SCUBE3Q8IX30 RN7SKP18-201ENST00000516005 275 ntBASIC3.78□□□□□ -1.8
SCUBE3Q8IX30 SNORA70.18-201ENST00000516696 98 ntBASIC3.78□□□□□ -1.8
SCUBE3Q8IX30 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.78□□□□□ -1.8
SCUBE3Q8IX30 YPEL5P2-201ENST00000605553 359 ntBASIC3.78□□□□□ -1.8
SCUBE3Q8IX30 AC095038.3-201ENST00000634439 195 ntBASIC3.78□□□□□ -1.8
SCUBE3Q8IX30 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SCUBE3Q8IX30 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
SCUBE3Q8IX30 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.81
SCUBE3Q8IX30 TNPO1P3-201ENST00000436471 2662 ntBASIC3.77□□□□□ -1.81
SCUBE3Q8IX30 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.77□□□□□ -1.81
SCUBE3Q8IX30 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.77□□□□□ -1.81
SCUBE3Q8IX30 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
SCUBE3Q8IX30 RNA5SP42-201ENST00000364278 115 ntBASIC3.77□□□□□ -1.81
SCUBE3Q8IX30 RNU6-679P-201ENST00000391003 106 ntBASIC3.77□□□□□ -1.81
SCUBE3Q8IX30 RNA5SP323-201ENST00000391094 133 ntBASIC3.77□□□□□ -1.81
SCUBE3Q8IX30 SNORA7.5-201ENST00000410672 110 ntBASIC3.77□□□□□ -1.81
SCUBE3Q8IX30 MICF-203ENST00000432679 129 ntBASIC3.77□□□□□ -1.81
SCUBE3Q8IX30 AL109933.2-201ENST00000452651 260 ntBASIC3.77□□□□□ -1.81
SCUBE3Q8IX30 RPL23AP63-201ENST00000498752 471 ntBASIC3.77□□□□□ -1.81
SCUBE3Q8IX30 AL353149.1-201ENST00000610667 244 ntBASIC3.77□□□□□ -1.81
SCUBE3Q8IX30 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.77□□□□□ -1.81
SCUBE3Q8IX30 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.77□□□□□ -1.81
SCUBE3Q8IX30 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
SCUBE3Q8IX30 GABRG2-229ENST00000641017 3628 ntBASIC3.76□□□□□ -1.81
SCUBE3Q8IX30 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
SCUBE3Q8IX30 RNU6-776P-201ENST00000364403 104 ntBASIC3.76□□□□□ -1.81
SCUBE3Q8IX30 RNU6-1022P-201ENST00000365049 104 ntBASIC3.76□□□□□ -1.81
SCUBE3Q8IX30 Y_RNA.377-201ENST00000365644 108 ntBASIC3.76□□□□□ -1.81
SCUBE3Q8IX30 Y_RNA.500-201ENST00000384466 111 ntBASIC3.76□□□□□ -1.81
SCUBE3Q8IX30 MIR218-1-201ENST00000384999 110 ntBASIC3.76□□□□□ -1.81
SCUBE3Q8IX30 AL353813.1-201ENST00000440700 253 ntBASIC3.76□□□□□ -1.81
SCUBE3Q8IX30 RN7SKP57-201ENST00000517248 293 ntBASIC3.76□□□□□ -1.81
SCUBE3Q8IX30 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.76□□□□□ -1.81
SCUBE3Q8IX30 UCA1.1-201ENST00000620952 75 ntBASIC3.76□□□□□ -1.81
SCUBE3Q8IX30 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
SCUBE3Q8IX30 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
SCUBE3Q8IX30 AL353746.1-201ENST00000566293 6881 ntBASIC3.75□□□□□ -1.81
SCUBE3Q8IX30 RNU6-283P-201ENST00000364788 107 ntBASIC3.75□□□□□ -1.81
SCUBE3Q8IX30 SNORA27-201ENST00000384323 126 ntBASIC3.75□□□□□ -1.81
SCUBE3Q8IX30 SNORA8-201ENST00000384574 139 ntBASIC3.75□□□□□ -1.81
SCUBE3Q8IX30 Y_RNA.620-201ENST00000411009 88 ntBASIC3.75□□□□□ -1.81
SCUBE3Q8IX30 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.75□□□□□ -1.81
SCUBE3Q8IX30 SNORD105B-201ENST00000458770 79 ntBASIC3.75□□□□□ -1.81
SCUBE3Q8IX30 RN7SL601P-201ENST00000471221 293 ntBASIC3.75□□□□□ -1.81
SCUBE3Q8IX30 Y_RNA.659-201ENST00000515994 113 ntBASIC3.75□□□□□ -1.81
SCUBE3Q8IX30 RNU6-1018P-201ENST00000516577 106 ntBASIC3.75□□□□□ -1.81
SCUBE3Q8IX30 RNU6-579P-201ENST00000516879 102 ntBASIC3.75□□□□□ -1.81
SCUBE3Q8IX30 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC3.75□□□□□ -1.81
SCUBE3Q8IX30 MIR4668-201ENST00000582284 70 ntBASIC3.75□□□□□ -1.81
SCUBE3Q8IX30 U4.6-201ENST00000621618 127 ntBASIC3.75□□□□□ -1.81
SCUBE3Q8IX30 AC021613.1-201ENST00000623880 111 ntBASIC3.75□□□□□ -1.81
SCUBE3Q8IX30 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC3.75□□□□□ -1.81
SCUBE3Q8IX30 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms