Protein–RNA interactions for Protein: Q6Q0C0

TRAF7, E3 ubiquitin-protein ligase TRAF7, humanhuman

Predictions only

Length 670 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF7Q6Q0C0 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4□□□□□ -1.77
TRAF7Q6Q0C0 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
TRAF7Q6Q0C0 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
TRAF7Q6Q0C0 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
TRAF7Q6Q0C0 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
TRAF7Q6Q0C0 SNORD31B-201ENST00000364977 69 ntBASIC3.99□□□□□ -1.77
TRAF7Q6Q0C0 MIR34C-201ENST00000384831 77 ntBASIC3.99□□□□□ -1.77
TRAF7Q6Q0C0 MIR1236-201ENST00000408340 102 ntBASIC3.99□□□□□ -1.77
TRAF7Q6Q0C0 MIR1183-201ENST00000408856 89 ntBASIC3.99□□□□□ -1.77
TRAF7Q6Q0C0 RN7SKP200-201ENST00000410564 320 ntBASIC3.99□□□□□ -1.77
TRAF7Q6Q0C0 HMGN1P7-201ENST00000491722 313 ntBASIC3.99□□□□□ -1.77
TRAF7Q6Q0C0 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.99□□□□□ -1.77
TRAF7Q6Q0C0 Y_RNA.253-201ENST00000364562 112 ntBASIC3.98□□□□□ -1.77
TRAF7Q6Q0C0 SNORD115-31-201ENST00000365318 82 ntBASIC3.98□□□□□ -1.77
TRAF7Q6Q0C0 MIR548O-201ENST00000408583 114 ntBASIC3.98□□□□□ -1.77
TRAF7Q6Q0C0 AC244636.1-201ENST00000421152 228 ntBASIC3.98□□□□□ -1.77
TRAF7Q6Q0C0 RNU7-80P-201ENST00000459562 61 ntBASIC3.98□□□□□ -1.77
TRAF7Q6Q0C0 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.98□□□□□ -1.77
TRAF7Q6Q0C0 AL627230.6-201ENST00000611129 280 ntBASIC3.98□□□□□ -1.77
TRAF7Q6Q0C0 MIR8058-201ENST00000615737 89 ntBASIC3.98□□□□□ -1.77
TRAF7Q6Q0C0 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.98□□□□□ -1.77
TRAF7Q6Q0C0 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC3.98□□□□□ -1.77
TRAF7Q6Q0C0 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.98□□□□□ -1.77
TRAF7Q6Q0C0 ZNF271P-202ENST00000465539 1970 ntBASIC3.98□□□□□ -1.77
TRAF7Q6Q0C0 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
TRAF7Q6Q0C0 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
TRAF7Q6Q0C0 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
TRAF7Q6Q0C0 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
TRAF7Q6Q0C0 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
TRAF7Q6Q0C0 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
TRAF7Q6Q0C0 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.97□□□□□ -1.77
TRAF7Q6Q0C0 RNU1-22P-201ENST00000363334 158 ntBASIC3.97□□□□□ -1.77
TRAF7Q6Q0C0 SNORD115-28-201ENST00000363931 81 ntBASIC3.97□□□□□ -1.77
TRAF7Q6Q0C0 AL627390.1-201ENST00000396055 340 ntBASIC3.97□□□□□ -1.77
TRAF7Q6Q0C0 TRBV25OR9-2-201ENST00000438417 374 ntBASIC3.97□□□□□ -1.77
TRAF7Q6Q0C0 RPS27P22-201ENST00000478056 241 ntBASIC3.97□□□□□ -1.77
TRAF7Q6Q0C0 SNORA31.4-201ENST00000516049 129 ntBASIC3.97□□□□□ -1.77
TRAF7Q6Q0C0 RNU6-977P-201ENST00000516411 103 ntBASIC3.97□□□□□ -1.77
TRAF7Q6Q0C0 RNU6-586P-201ENST00000517265 104 ntBASIC3.97□□□□□ -1.77
TRAF7Q6Q0C0 AL513043.2-201ENST00000573941 143 ntBASIC3.97□□□□□ -1.77
TRAF7Q6Q0C0 AC078899.2-201ENST00000595282 212 ntBASIC3.97□□□□□ -1.77
TRAF7Q6Q0C0 AC110741.2-201ENST00000605278 268 ntBASIC3.97□□□□□ -1.77
TRAF7Q6Q0C0 AC020891.4-201ENST00000605745 93 ntBASIC3.97□□□□□ -1.77
TRAF7Q6Q0C0 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
TRAF7Q6Q0C0 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
TRAF7Q6Q0C0 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
TRAF7Q6Q0C0 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.96□□□□□ -1.78
TRAF7Q6Q0C0 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.96□□□□□ -1.78
TRAF7Q6Q0C0 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.96□□□□□ -1.78
TRAF7Q6Q0C0 RNU4-35P-201ENST00000362588 141 ntBASIC3.96□□□□□ -1.78
TRAF7Q6Q0C0 RNU6-161P-201ENST00000363051 106 ntBASIC3.96□□□□□ -1.78
TRAF7Q6Q0C0 Y_RNA.236-201ENST00000364427 111 ntBASIC3.96□□□□□ -1.78
TRAF7Q6Q0C0 SNORA48.2-201ENST00000390926 124 ntBASIC3.96□□□□□ -1.78
TRAF7Q6Q0C0 SNORD17-201ENST00000390930 237 ntBASIC3.96□□□□□ -1.78
TRAF7Q6Q0C0 Y_RNA.596-201ENST00000410462 109 ntBASIC3.96□□□□□ -1.78
TRAF7Q6Q0C0 AC017083.1-201ENST00000428093 483 ntBASIC3.96□□□□□ -1.78
TRAF7Q6Q0C0 RNU1-98P-201ENST00000458992 160 ntBASIC3.96□□□□□ -1.78
TRAF7Q6Q0C0 SCGB1D5P-201ENST00000515134 247 ntBASIC3.96□□□□□ -1.78
TRAF7Q6Q0C0 RNU2-27P-201ENST00000516185 142 ntBASIC3.96□□□□□ -1.78
TRAF7Q6Q0C0 RNU6-711P-201ENST00000517255 106 ntBASIC3.96□□□□□ -1.78
TRAF7Q6Q0C0 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.96□□□□□ -1.78
TRAF7Q6Q0C0 AL360157.1-201ENST00000565962 87 ntBASIC3.96□□□□□ -1.78
TRAF7Q6Q0C0 AC012531.5-201ENST00000611375 151 ntBASIC3.96□□□□□ -1.78
TRAF7Q6Q0C0 AL359075.3-201ENST00000613288 217 ntBASIC3.96□□□□□ -1.78
TRAF7Q6Q0C0 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
TRAF7Q6Q0C0 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
TRAF7Q6Q0C0 FAM35DP-201ENST00000323387 2712 ntBASIC3.96□□□□□ -1.78
TRAF7Q6Q0C0 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.96□□□□□ -1.78
TRAF7Q6Q0C0 IPO8P1-201ENST00000455509 3109 ntBASIC3.96□□□□□ -1.78
TRAF7Q6Q0C0 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.78
TRAF7Q6Q0C0 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
TRAF7Q6Q0C0 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.95□□□□□ -1.78
TRAF7Q6Q0C0 RNU6-1274P-201ENST00000384557 107 ntBASIC3.95□□□□□ -1.78
TRAF7Q6Q0C0 RNU6-1235P-201ENST00000384559 107 ntBASIC3.95□□□□□ -1.78
TRAF7Q6Q0C0 AL138878.1-201ENST00000405131 347 ntBASIC3.95□□□□□ -1.78
TRAF7Q6Q0C0 RNA5SP306-201ENST00000411087 107 ntBASIC3.95□□□□□ -1.78
TRAF7Q6Q0C0 POLR2J4-204ENST00000418424 324 ntBASIC3.95□□□□□ -1.78
TRAF7Q6Q0C0 AL445685.2-201ENST00000422551 342 ntBASIC3.95□□□□□ -1.78
TRAF7Q6Q0C0 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.95□□□□□ -1.78
TRAF7Q6Q0C0 AC016717.1-201ENST00000448918 286 ntBASIC3.95□□□□□ -1.78
TRAF7Q6Q0C0 RNU6-498P-201ENST00000459468 107 ntBASIC3.95□□□□□ -1.78
TRAF7Q6Q0C0 AC025518.1-201ENST00000479856 347 ntBASIC3.95□□□□□ -1.78
TRAF7Q6Q0C0 RNU7-25P-201ENST00000516544 62 ntBASIC3.95□□□□□ -1.78
TRAF7Q6Q0C0 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
TRAF7Q6Q0C0 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.95□□□□□ -1.78
TRAF7Q6Q0C0 AL356274.2-201ENST00000624379 3752 ntBASIC3.94□□□□□ -1.78
TRAF7Q6Q0C0 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.94□□□□□ -1.78
TRAF7Q6Q0C0 MIR3074-201ENST00000384885 81 ntBASIC3.94□□□□□ -1.78
TRAF7Q6Q0C0 AC087499.7-201ENST00000441958 109 ntBASIC3.94□□□□□ -1.78
TRAF7Q6Q0C0 HMGN2P7-201ENST00000456186 273 ntBASIC3.94□□□□□ -1.78
TRAF7Q6Q0C0 U3.44-201ENST00000458938 192 ntBASIC3.94□□□□□ -1.78
TRAF7Q6Q0C0 SNORA59A-201ENST00000459326 152 ntBASIC3.94□□□□□ -1.78
TRAF7Q6Q0C0 TRBV12-2-201ENST00000489763 344 ntBASIC3.94□□□□□ -1.78
TRAF7Q6Q0C0 RNU2-34P-201ENST00000516534 121 ntBASIC3.94□□□□□ -1.78
TRAF7Q6Q0C0 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC3.94□□□□□ -1.78
TRAF7Q6Q0C0 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.94□□□□□ -1.78
TRAF7Q6Q0C0 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.94□□□□□ -1.78
TRAF7Q6Q0C0 MIR4474-201ENST00000579189 78 ntBASIC3.94□□□□□ -1.78
TRAF7Q6Q0C0 AC013412.1-201ENST00000610687 192 ntBASIC3.94□□□□□ -1.78
TRAF7Q6Q0C0 NEAT1_2.1-201ENST00000620525 105 ntBASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 121.9 ms