Protein–RNA interactions for Protein: P23469

PTPRE, Receptor-type tyrosine-protein phosphatase epsilon, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPREP23469 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
PTPREP23469 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC4.14□□□□□ -1.75
PTPREP23469 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
PTPREP23469 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC4.14□□□□□ -1.75
PTPREP23469 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
PTPREP23469 RNU6-633P-201ENST00000362612 103 ntBASIC4.14□□□□□ -1.75
PTPREP23469 SNORA48.2-201ENST00000390926 124 ntBASIC4.14□□□□□ -1.75
PTPREP23469 RNU6ATAC10P-201ENST00000408635 111 ntBASIC4.14□□□□□ -1.75
PTPREP23469 AC006989.1-201ENST00000427212 131 ntBASIC4.14□□□□□ -1.75
PTPREP23469 RPS29P31-201ENST00000446147 164 ntBASIC4.14□□□□□ -1.75
PTPREP23469 MIR4439-201ENST00000583746 80 ntBASIC4.14□□□□□ -1.75
PTPREP23469 MIR4762-201ENST00000585261 75 ntBASIC4.14□□□□□ -1.75
PTPREP23469 AC096720.1-201ENST00000604441 183 ntBASIC4.14□□□□□ -1.75
PTPREP23469 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC4.14□□□□□ -1.75
PTPREP23469 U6.108-201ENST00000637764 58 ntBASIC4.14□□□□□ -1.75
PTPREP23469 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC4.14□□□□□ -1.75
PTPREP23469 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
PTPREP23469 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
PTPREP23469 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC4.14□□□□□ -1.75
PTPREP23469 MIR340-201ENST00000362125 95 ntBASIC4.13□□□□□ -1.75
PTPREP23469 RNA5SP502-201ENST00000362694 119 ntBASIC4.13□□□□□ -1.75
PTPREP23469 RNU6-1229P-201ENST00000364295 107 ntBASIC4.13□□□□□ -1.75
PTPREP23469 POLR2J4-204ENST00000418424 324 ntBASIC4.13□□□□□ -1.75
PTPREP23469 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC4.13□□□□□ -1.75
PTPREP23469 SNORA59A-201ENST00000459326 152 ntBASIC4.13□□□□□ -1.75
PTPREP23469 RNU2-27P-201ENST00000516185 142 ntBASIC4.13□□□□□ -1.75
PTPREP23469 SNORD45.4-201ENST00000516629 73 ntBASIC4.13□□□□□ -1.75
PTPREP23469 RNU6-579P-201ENST00000516879 102 ntBASIC4.13□□□□□ -1.75
PTPREP23469 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PTPREP23469 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
PTPREP23469 Y_RNA.332-201ENST00000365271 113 ntBASIC4.12□□□□□ -1.75
PTPREP23469 RPL23AP48-201ENST00000406913 488 ntBASIC4.12□□□□□ -1.75
PTPREP23469 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC4.12□□□□□ -1.75
PTPREP23469 AC025518.1-201ENST00000479856 347 ntBASIC4.12□□□□□ -1.75
PTPREP23469 MIR4712-201ENST00000583750 82 ntBASIC4.12□□□□□ -1.75
PTPREP23469 AL512310.12-203ENST00000640543 90 ntBASIC4.12□□□□□ -1.75
PTPREP23469 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC4.11□□□□□ -1.75
PTPREP23469 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
PTPREP23469 USP33-201ENST00000357428 4155 ntTSL 5 BASIC4.11□□□□□ -1.75
PTPREP23469 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
PTPREP23469 RNU4-35P-201ENST00000362588 141 ntBASIC4.11□□□□□ -1.75
PTPREP23469 U8.5-201ENST00000364528 136 ntBASIC4.11□□□□□ -1.75
PTPREP23469 RNU6-546P-201ENST00000383991 107 ntBASIC4.11□□□□□ -1.75
PTPREP23469 MIR767-201ENST00000390228 109 ntBASIC4.11□□□□□ -1.75
PTPREP23469 HSPE1P26-201ENST00000405341 275 ntBASIC4.11□□□□□ -1.75
PTPREP23469 RNU2-37P-201ENST00000410695 177 ntBASIC4.11□□□□□ -1.75
PTPREP23469 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.11□□□□□ -1.75
PTPREP23469 AL109933.2-201ENST00000452651 260 ntBASIC4.11□□□□□ -1.75
PTPREP23469 RNU1-142P-201ENST00000516682 145 ntBASIC4.11□□□□□ -1.75
PTPREP23469 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC4.11□□□□□ -1.75
PTPREP23469 MIR8057-201ENST00000620957 69 ntBASIC4.11□□□□□ -1.75
PTPREP23469 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
PTPREP23469 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
PTPREP23469 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
PTPREP23469 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC4.11□□□□□ -1.75
PTPREP23469 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
PTPREP23469 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.1□□□□□ -1.75
PTPREP23469 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
PTPREP23469 MIR423-201ENST00000362201 94 ntBASIC4.1□□□□□ -1.75
PTPREP23469 Y_RNA.336-201ENST00000365307 109 ntBASIC4.1□□□□□ -1.75
PTPREP23469 SNORA27-201ENST00000384323 126 ntBASIC4.1□□□□□ -1.75
PTPREP23469 AC017083.1-201ENST00000428093 483 ntBASIC4.1□□□□□ -1.75
PTPREP23469 RNU6-991P-201ENST00000516168 107 ntBASIC4.1□□□□□ -1.75
PTPREP23469 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
PTPREP23469 BCLAF1P1-201ENST00000505813 2752 ntBASIC4.1□□□□□ -1.75
PTPREP23469 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
PTPREP23469 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.09□□□□□ -1.75
PTPREP23469 RNU6-1313P-201ENST00000362622 102 ntBASIC4.09□□□□□ -1.75
PTPREP23469 Y_RNA.171-201ENST00000363760 102 ntBASIC4.09□□□□□ -1.75
PTPREP23469 SNORA38.1-201ENST00000364172 131 ntBASIC4.09□□□□□ -1.75
PTPREP23469 SNORA1.1-201ENST00000364671 133 ntBASIC4.09□□□□□ -1.75
PTPREP23469 SNORA80E-201ENST00000384744 137 ntBASIC4.09□□□□□ -1.75
PTPREP23469 SNORD17-201ENST00000390930 237 ntBASIC4.09□□□□□ -1.75
PTPREP23469 SNORD77B-201ENST00000391112 67 ntBASIC4.09□□□□□ -1.75
PTPREP23469 RHEBP3-201ENST00000411920 351 ntBASIC4.09□□□□□ -1.75
PTPREP23469 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC4.09□□□□□ -1.75
PTPREP23469 RNU7-113P-201ENST00000459273 62 ntBASIC4.09□□□□□ -1.75
PTPREP23469 RNU6-998P-201ENST00000515894 101 ntBASIC4.09□□□□□ -1.75
PTPREP23469 RNU6-1041P-201ENST00000516254 102 ntBASIC4.09□□□□□ -1.75
PTPREP23469 SCARNA3-201ENST00000517097 143 ntBASIC4.09□□□□□ -1.75
PTPREP23469 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC4.09□□□□□ -1.75
PTPREP23469 AC103810.7-201ENST00000607821 91 ntBASIC4.09□□□□□ -1.75
PTPREP23469 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC4.09□□□□□ -1.76
PTPREP23469 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.76
PTPREP23469 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC4.09□□□□□ -1.76
PTPREP23469 AC092881.1-201ENST00000638218 2733 ntBASIC4.08□□□□□ -1.76
PTPREP23469 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
PTPREP23469 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
PTPREP23469 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.08□□□□□ -1.76
PTPREP23469 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC4.08□□□□□ -1.76
PTPREP23469 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
PTPREP23469 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
PTPREP23469 MIR128-1-201ENST00000384921 82 ntBASIC4.08□□□□□ -1.76
PTPREP23469 Y_RNA.609-201ENST00000410669 89 ntBASIC4.08□□□□□ -1.76
PTPREP23469 AC009969.1-201ENST00000438726 172 ntBASIC4.08□□□□□ -1.76
PTPREP23469 U3.44-201ENST00000458938 192 ntBASIC4.08□□□□□ -1.76
PTPREP23469 RNU6-1258P-201ENST00000516911 111 ntBASIC4.08□□□□□ -1.76
PTPREP23469 PWAR6-201ENST00000552334 4618 ntBASIC4.08□□□□□ -1.76
PTPREP23469 HNRNPDLP4-201ENST00000605144 301 ntBASIC4.08□□□□□ -1.76
PTPREP23469 MIR376B-201ENST00000614515 100 ntBASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms