Protein–RNA interactions for Protein: A0A0B4J274

TRAV20, T-cell receptor alpha variable 20 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV20A0A0B4J274 MIR3670-1-201ENST00000584160 65 ntBASIC2.54□□□□□ -2
TRAV20A0A0B4J274 MIR3670-3-201ENST00000584855 65 ntBASIC2.54□□□□□ -2
TRAV20A0A0B4J274 MIR3670-4-201ENST00000612260 65 ntBASIC2.54□□□□□ -2
TRAV20A0A0B4J274 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.54□□□□□ -2
TRAV20A0A0B4J274 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
TRAV20A0A0B4J274 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
TRAV20A0A0B4J274 SNORA5B-201ENST00000363786 132 ntBASIC2.53□□□□□ -2
TRAV20A0A0B4J274 Y_RNA.265-201ENST00000364677 108 ntBASIC2.53□□□□□ -2
TRAV20A0A0B4J274 RNY1P5-201ENST00000383890 115 ntBASIC2.53□□□□□ -2
TRAV20A0A0B4J274 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.53□□□□□ -2
TRAV20A0A0B4J274 NDUFA4P2-201ENST00000489989 244 ntBASIC2.53□□□□□ -2
TRAV20A0A0B4J274 OR9P1P-201ENST00000496431 281 ntBASIC2.53□□□□□ -2
TRAV20A0A0B4J274 Y_RNA.714-201ENST00000517065 90 ntBASIC2.53□□□□□ -2
TRAV20A0A0B4J274 MIR5194-201ENST00000582634 120 ntBASIC2.53□□□□□ -2
TRAV20A0A0B4J274 AC245884.12-201ENST00000615364 59 ntBASIC2.53□□□□□ -2
TRAV20A0A0B4J274 MIR8054-201ENST00000620877 86 ntBASIC2.53□□□□□ -2
TRAV20A0A0B4J274 MIR6852-201ENST00000621699 66 ntBASIC2.53□□□□□ -2
TRAV20A0A0B4J274 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
TRAV20A0A0B4J274 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.53□□□□□ -2.01
TRAV20A0A0B4J274 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.52□□□□□ -2.01
TRAV20A0A0B4J274 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
TRAV20A0A0B4J274 SNORD68-201ENST00000363214 84 ntBASIC2.52□□□□□ -2.01
TRAV20A0A0B4J274 Y_RNA.337-201ENST00000365312 102 ntBASIC2.52□□□□□ -2.01
TRAV20A0A0B4J274 RNU1-51P-201ENST00000365345 176 ntBASIC2.52□□□□□ -2.01
TRAV20A0A0B4J274 RNU6-484P-201ENST00000384016 107 ntBASIC2.52□□□□□ -2.01
TRAV20A0A0B4J274 RNU6-851P-201ENST00000384565 107 ntBASIC2.52□□□□□ -2.01
TRAV20A0A0B4J274 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
TRAV20A0A0B4J274 RNU6-440P-201ENST00000390882 105 ntBASIC2.52□□□□□ -2.01
TRAV20A0A0B4J274 RNU6-131P-201ENST00000391144 107 ntBASIC2.52□□□□□ -2.01
TRAV20A0A0B4J274 RNA5SP450-201ENST00000411206 102 ntBASIC2.52□□□□□ -2.01
TRAV20A0A0B4J274 EEF1A1P41-201ENST00000414667 207 ntBASIC2.52□□□□□ -2.01
TRAV20A0A0B4J274 RNU7-121P-201ENST00000516604 62 ntBASIC2.52□□□□□ -2.01
TRAV20A0A0B4J274 SUB1P4-201ENST00000566062 339 ntBASIC2.52□□□□□ -2.01
TRAV20A0A0B4J274 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.52□□□□□ -2.01
TRAV20A0A0B4J274 Pinc.1-201ENST00000616452 154 ntBASIC2.52□□□□□ -2.01
TRAV20A0A0B4J274 U1.36-201ENST00000620684 176 ntBASIC2.52□□□□□ -2.01
TRAV20A0A0B4J274 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.52□□□□□ -2.01
TRAV20A0A0B4J274 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.51□□□□□ -2.01
TRAV20A0A0B4J274 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
TRAV20A0A0B4J274 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
TRAV20A0A0B4J274 SNORA63D-201ENST00000364359 132 ntBASIC2.51□□□□□ -2.01
TRAV20A0A0B4J274 SNORA54-201ENST00000384281 123 ntBASIC2.51□□□□□ -2.01
TRAV20A0A0B4J274 RNA5SP482-201ENST00000391269 118 ntBASIC2.51□□□□□ -2.01
TRAV20A0A0B4J274 AL590004.2-201ENST00000404787 371 ntBASIC2.51□□□□□ -2.01
TRAV20A0A0B4J274 RNU4-61P-201ENST00000411243 107 ntBASIC2.51□□□□□ -2.01
TRAV20A0A0B4J274 UBE2DNL-203ENST00000474922 222 ntBASIC2.51□□□□□ -2.01
TRAV20A0A0B4J274 RN7SL20P-201ENST00000488827 297 ntBASIC2.51□□□□□ -2.01
TRAV20A0A0B4J274 RNU6-197P-201ENST00000516680 100 ntBASIC2.51□□□□□ -2.01
TRAV20A0A0B4J274 RNU7-28P-201ENST00000516759 62 ntBASIC2.51□□□□□ -2.01
TRAV20A0A0B4J274 RNU1-104P-201ENST00000517280 175 ntBASIC2.51□□□□□ -2.01
TRAV20A0A0B4J274 MIR4662B-201ENST00000579498 81 ntBASIC2.51□□□□□ -2.01
TRAV20A0A0B4J274 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2.51□□□□□ -2.01
TRAV20A0A0B4J274 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
TRAV20A0A0B4J274 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.5□□□□□ -2.01
TRAV20A0A0B4J274 RNU6-1138P-201ENST00000365359 106 ntBASIC2.5□□□□□ -2.01
TRAV20A0A0B4J274 RNU6-187P-201ENST00000384139 106 ntBASIC2.5□□□□□ -2.01
TRAV20A0A0B4J274 MIR520A-201ENST00000384862 85 ntBASIC2.5□□□□□ -2.01
TRAV20A0A0B4J274 MIR522-201ENST00000385071 87 ntBASIC2.5□□□□□ -2.01
TRAV20A0A0B4J274 MIR524-201ENST00000385242 87 ntBASIC2.5□□□□□ -2.01
TRAV20A0A0B4J274 SNORD67-201ENST00000390833 111 ntBASIC2.5□□□□□ -2.01
TRAV20A0A0B4J274 RNU2-70P-201ENST00000410718 179 ntBASIC2.5□□□□□ -2.01
TRAV20A0A0B4J274 RNU2-7P-201ENST00000410794 178 ntBASIC2.5□□□□□ -2.01
TRAV20A0A0B4J274 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.5□□□□□ -2.01
TRAV20A0A0B4J274 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.5□□□□□ -2.01
TRAV20A0A0B4J274 RN7SKP43-201ENST00000516173 320 ntBASIC2.5□□□□□ -2.01
TRAV20A0A0B4J274 RNU6-346P-201ENST00000516288 111 ntBASIC2.5□□□□□ -2.01
TRAV20A0A0B4J274 RNA5SP367-201ENST00000516557 118 ntBASIC2.5□□□□□ -2.01
TRAV20A0A0B4J274 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC2.5□□□□□ -2.01
TRAV20A0A0B4J274 ELOCP29-201ENST00000588193 334 ntBASIC2.5□□□□□ -2.01
TRAV20A0A0B4J274 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.5□□□□□ -2.01
TRAV20A0A0B4J274 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
TRAV20A0A0B4J274 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.49□□□□□ -2.01
TRAV20A0A0B4J274 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.49□□□□□ -2.01
TRAV20A0A0B4J274 SNORA25.6-201ENST00000364121 118 ntBASIC2.49□□□□□ -2.01
TRAV20A0A0B4J274 RNU6-151P-201ENST00000364158 107 ntBASIC2.49□□□□□ -2.01
TRAV20A0A0B4J274 Y_RNA.521-201ENST00000384560 114 ntBASIC2.49□□□□□ -2.01
TRAV20A0A0B4J274 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.49□□□□□ -2.01
TRAV20A0A0B4J274 FTH1P12-201ENST00000432137 551 ntBASIC2.49□□□□□ -2.01
TRAV20A0A0B4J274 STAG3L5P-204ENST00000443759 179 ntBASIC2.49□□□□□ -2.01
TRAV20A0A0B4J274 SCGB1D5P-201ENST00000515134 247 ntBASIC2.49□□□□□ -2.01
TRAV20A0A0B4J274 SNORA31.10-201ENST00000516482 106 ntBASIC2.49□□□□□ -2.01
TRAV20A0A0B4J274 RNU6-126P-201ENST00000516685 103 ntBASIC2.49□□□□□ -2.01
TRAV20A0A0B4J274 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC2.49□□□□□ -2.01
TRAV20A0A0B4J274 AC087685.1-201ENST00000587507 141 ntBASIC2.49□□□□□ -2.01
TRAV20A0A0B4J274 DNAJC19P2-201ENST00000593340 302 ntBASIC2.49□□□□□ -2.01
TRAV20A0A0B4J274 SNORA28-201ENST00000606769 126 ntBASIC2.49□□□□□ -2.01
TRAV20A0A0B4J274 Y_RNA.778-201ENST00000620203 90 ntBASIC2.49□□□□□ -2.01
TRAV20A0A0B4J274 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.48□□□□□ -2.01
TRAV20A0A0B4J274 AC096644.4-201ENST00000563417 2912 ntBASIC2.48□□□□□ -2.01
TRAV20A0A0B4J274 RNU6-112P-201ENST00000363599 104 ntBASIC2.48□□□□□ -2.01
TRAV20A0A0B4J274 RNU6-950P-201ENST00000384651 107 ntBASIC2.48□□□□□ -2.01
TRAV20A0A0B4J274 SNORA26-201ENST00000391286 122 ntBASIC2.48□□□□□ -2.01
TRAV20A0A0B4J274 RN7SKP200-201ENST00000410564 320 ntBASIC2.48□□□□□ -2.01
TRAV20A0A0B4J274 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.48□□□□□ -2.01
TRAV20A0A0B4J274 HSPE1P9-201ENST00000440046 311 ntBASIC2.48□□□□□ -2.01
TRAV20A0A0B4J274 MRPS17P9-201ENST00000511924 393 ntBASIC2.48□□□□□ -2.01
TRAV20A0A0B4J274 RNA5SP153-201ENST00000516498 76 ntBASIC2.48□□□□□ -2.01
TRAV20A0A0B4J274 AC091544.4-201ENST00000555268 342 ntBASIC2.48□□□□□ -2.01
TRAV20A0A0B4J274 AL160236.1-201ENST00000556317 195 ntBASIC2.48□□□□□ -2.01
TRAV20A0A0B4J274 MIR378D2-201ENST00000580636 98 ntBASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms