Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 AC008555.8-201ENST00000623602 2168 ntBASIC2.97□□□□□ -1.93
SSU72Q9NP77 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC2.96□□□□□ -1.93
SSU72Q9NP77 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.96□□□□□ -1.94
SSU72Q9NP77 RNA5SP50-201ENST00000363731 107 ntBASIC2.96□□□□□ -1.94
SSU72Q9NP77 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
SSU72Q9NP77 SNORD67-201ENST00000390833 111 ntBASIC2.96□□□□□ -1.94
SSU72Q9NP77 AC003685.2-201ENST00000422795 395 ntBASIC2.96□□□□□ -1.94
SSU72Q9NP77 RPS29P12-201ENST00000460178 152 ntBASIC2.96□□□□□ -1.94
SSU72Q9NP77 CKS1BP2-201ENST00000497342 240 ntBASIC2.96□□□□□ -1.94
SSU72Q9NP77 AC026403.1-201ENST00000518938 295 ntBASIC2.96□□□□□ -1.94
SSU72Q9NP77 IGHVIII-67-2-201ENST00000519849 88 ntBASIC2.96□□□□□ -1.94
SSU72Q9NP77 AL355297.2-201ENST00000604792 129 ntBASIC2.96□□□□□ -1.94
SSU72Q9NP77 AL353149.1-201ENST00000610667 244 ntBASIC2.96□□□□□ -1.94
SSU72Q9NP77 AL359075.3-201ENST00000613288 217 ntBASIC2.96□□□□□ -1.94
SSU72Q9NP77 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
SSU72Q9NP77 ZNF271P-202ENST00000465539 1970 ntBASIC2.96□□□□□ -1.94
SSU72Q9NP77 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC2.96□□□□□ -1.94
SSU72Q9NP77 AC093010.3-201ENST00000570269 15214 ntBASIC2.95□□□□□ -1.94
SSU72Q9NP77 Y_RNA.267-201ENST00000364679 109 ntBASIC2.95□□□□□ -1.94
SSU72Q9NP77 RNU6-880P-201ENST00000384526 107 ntBASIC2.95□□□□□ -1.94
SSU72Q9NP77 MIR518F-201ENST00000384973 87 ntBASIC2.95□□□□□ -1.94
SSU72Q9NP77 MIR561-201ENST00000385216 97 ntBASIC2.95□□□□□ -1.94
SSU72Q9NP77 SNORA48.8-201ENST00000391324 134 ntBASIC2.95□□□□□ -1.94
SSU72Q9NP77 RNU4-47P-201ENST00000410876 114 ntBASIC2.95□□□□□ -1.94
SSU72Q9NP77 CYCSP19-201ENST00000411715 316 ntBASIC2.95□□□□□ -1.94
SSU72Q9NP77 CALM2P4-201ENST00000430810 426 ntBASIC2.95□□□□□ -1.94
SSU72Q9NP77 RPS15AP28-201ENST00000435088 386 ntBASIC2.95□□□□□ -1.94
SSU72Q9NP77 MTATP6P21-201ENST00000440681 189 ntBASIC2.95□□□□□ -1.94
SSU72Q9NP77 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.95□□□□□ -1.94
SSU72Q9NP77 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC2.95□□□□□ -1.94
SSU72Q9NP77 RN7SL863P-201ENST00000462370 296 ntBASIC2.95□□□□□ -1.94
SSU72Q9NP77 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
SSU72Q9NP77 RN7SL297P-201ENST00000483161 293 ntBASIC2.95□□□□□ -1.94
SSU72Q9NP77 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.95□□□□□ -1.94
SSU72Q9NP77 RNU6-1149P-201ENST00000516810 97 ntBASIC2.95□□□□□ -1.94
SSU72Q9NP77 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC2.95□□□□□ -1.94
SSU72Q9NP77 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC2.95□□□□□ -1.94
SSU72Q9NP77 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
SSU72Q9NP77 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
SSU72Q9NP77 Y_RNA.309-201ENST00000365046 111 ntBASIC2.94□□□□□ -1.94
SSU72Q9NP77 SNORD21-201ENST00000383953 95 ntBASIC2.94□□□□□ -1.94
SSU72Q9NP77 MIR522-201ENST00000385071 87 ntBASIC2.94□□□□□ -1.94
SSU72Q9NP77 MIR1263-201ENST00000408324 86 ntBASIC2.94□□□□□ -1.94
SSU72Q9NP77 EDDM3CP-201ENST00000415977 425 ntBASIC2.94□□□□□ -1.94
SSU72Q9NP77 RNU6-693P-201ENST00000516134 107 ntBASIC2.94□□□□□ -1.94
SSU72Q9NP77 AL358944.1-201ENST00000528537 144 ntBASIC2.94□□□□□ -1.94
SSU72Q9NP77 MIR3922-201ENST00000585192 84 ntBASIC2.94□□□□□ -1.94
SSU72Q9NP77 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.94□□□□□ -1.94
SSU72Q9NP77 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.94□□□□□ -1.94
SSU72Q9NP77 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.94□□□□□ -1.94
SSU72Q9NP77 MIR450A1-201ENST00000362262 91 ntBASIC2.93□□□□□ -1.94
SSU72Q9NP77 MIR126-201ENST00000362291 85 ntBASIC2.93□□□□□ -1.94
SSU72Q9NP77 SNORA1B-201ENST00000362535 133 ntBASIC2.93□□□□□ -1.94
SSU72Q9NP77 RNA5SP125-201ENST00000364843 120 ntBASIC2.93□□□□□ -1.94
SSU72Q9NP77 RNA5SP479-201ENST00000364858 117 ntBASIC2.93□□□□□ -1.94
SSU72Q9NP77 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
SSU72Q9NP77 MIR1262-201ENST00000408276 93 ntBASIC2.93□□□□□ -1.94
SSU72Q9NP77 RNU6ATAC-201ENST00000408749 126 ntBASIC2.93□□□□□ -1.94
SSU72Q9NP77 RNU2-63P-201ENST00000410792 194 ntBASIC2.93□□□□□ -1.94
SSU72Q9NP77 RPS29P4-201ENST00000414733 161 ntBASIC2.93□□□□□ -1.94
SSU72Q9NP77 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.93□□□□□ -1.94
SSU72Q9NP77 FTH1P12-201ENST00000432137 551 ntBASIC2.93□□□□□ -1.94
SSU72Q9NP77 AC091826.1-201ENST00000514065 313 ntBASIC2.93□□□□□ -1.94
SSU72Q9NP77 UBL5P2-201ENST00000583788 219 ntBASIC2.93□□□□□ -1.94
SSU72Q9NP77 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.93□□□□□ -1.94
SSU72Q9NP77 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
SSU72Q9NP77 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.92□□□□□ -1.94
SSU72Q9NP77 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
SSU72Q9NP77 SNORA25B-201ENST00000365507 128 ntBASIC2.92□□□□□ -1.94
SSU72Q9NP77 Y_RNA.528-201ENST00000384575 108 ntBASIC2.92□□□□□ -1.94
SSU72Q9NP77 MIR1289-1-201ENST00000408836 144 ntBASIC2.92□□□□□ -1.94
SSU72Q9NP77 AL133547.1-201ENST00000448546 220 ntBASIC2.92□□□□□ -1.94
SSU72Q9NP77 SNORA9.3-201ENST00000516383 129 ntBASIC2.92□□□□□ -1.94
SSU72Q9NP77 AC091544.4-201ENST00000555268 342 ntBASIC2.92□□□□□ -1.94
SSU72Q9NP77 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.92□□□□□ -1.94
SSU72Q9NP77 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC2.92□□□□□ -1.94
SSU72Q9NP77 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.92□□□□□ -1.94
SSU72Q9NP77 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
SSU72Q9NP77 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.91□□□□□ -1.94
SSU72Q9NP77 MIR22-201ENST00000362190 85 ntBASIC2.91□□□□□ -1.94
SSU72Q9NP77 RNU6-461P-201ENST00000364195 107 ntBASIC2.91□□□□□ -1.94
SSU72Q9NP77 RNU6-106P-201ENST00000384405 107 ntBASIC2.91□□□□□ -1.94
SSU72Q9NP77 MIR512-1-201ENST00000384913 84 ntBASIC2.91□□□□□ -1.94
SSU72Q9NP77 RNU6ATAC34P-201ENST00000408879 121 ntBASIC2.91□□□□□ -1.94
SSU72Q9NP77 SNRPGP13-201ENST00000442212 177 ntBASIC2.91□□□□□ -1.94
SSU72Q9NP77 RNU1-131P-201ENST00000458943 161 ntBASIC2.91□□□□□ -1.94
SSU72Q9NP77 RNU1-142P-201ENST00000516682 145 ntBASIC2.91□□□□□ -1.94
SSU72Q9NP77 RN7SKP282-201ENST00000516824 299 ntBASIC2.91□□□□□ -1.94
SSU72Q9NP77 AC107016.2-201ENST00000547968 190 ntBASIC2.91□□□□□ -1.94
SSU72Q9NP77 MIR3605-201ENST00000583214 100 ntBASIC2.91□□□□□ -1.94
SSU72Q9NP77 uc_338.28-201ENST00000612082 187 ntBASIC2.91□□□□□ -1.94
SSU72Q9NP77 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.91□□□□□ -1.94
SSU72Q9NP77 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.91□□□□□ -1.94
SSU72Q9NP77 Y_RNA.116-201ENST00000363292 103 ntBASIC2.9□□□□□ -1.95
SSU72Q9NP77 Y_RNA.281-201ENST00000364774 94 ntBASIC2.9□□□□□ -1.95
SSU72Q9NP77 Y_RNA.366-201ENST00000365540 102 ntBASIC2.9□□□□□ -1.95
SSU72Q9NP77 MIR490-201ENST00000384865 128 ntBASIC2.9□□□□□ -1.95
SSU72Q9NP77 SRIP3-201ENST00000413200 219 ntBASIC2.9□□□□□ -1.95
SSU72Q9NP77 TRIAP1P1-201ENST00000427062 225 ntBASIC2.9□□□□□ -1.95
SSU72Q9NP77 AL163195.1-201ENST00000496941 348 ntBASIC2.9□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 117.3 ms