Protein–RNA interactions for Protein: Q9H6U6

BCAS3, Breast carcinoma-amplified sequence 3, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS3Q9H6U6 MRPS36P2-201ENST00000512569 299 ntBASIC2.88□□□□□ -1.95
BCAS3Q9H6U6 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.88□□□□□ -1.95
BCAS3Q9H6U6 RNA5SP385-201ENST00000515947 110 ntBASIC2.88□□□□□ -1.95
BCAS3Q9H6U6 RN7SKP179-201ENST00000516126 217 ntBASIC2.88□□□□□ -1.95
BCAS3Q9H6U6 RNA5SP153-201ENST00000516498 76 ntBASIC2.88□□□□□ -1.95
BCAS3Q9H6U6 Y_RNA.712-201ENST00000517011 92 ntBASIC2.88□□□□□ -1.95
BCAS3Q9H6U6 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
BCAS3Q9H6U6 AC007336.1-201ENST00000576365 3828 ntBASIC2.88□□□□□ -1.95
BCAS3Q9H6U6 AC120024.3-201ENST00000603167 156 ntBASIC2.88□□□□□ -1.95
BCAS3Q9H6U6 UCA1.1-201ENST00000620952 75 ntBASIC2.88□□□□□ -1.95
BCAS3Q9H6U6 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.88□□□□□ -1.95
BCAS3Q9H6U6 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.88□□□□□ -1.95
BCAS3Q9H6U6 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
BCAS3Q9H6U6 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.87□□□□□ -1.95
BCAS3Q9H6U6 RNU6-1180P-201ENST00000364935 107 ntBASIC2.87□□□□□ -1.95
BCAS3Q9H6U6 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
BCAS3Q9H6U6 SNORA79-201ENST00000408376 140 ntBASIC2.87□□□□□ -1.95
BCAS3Q9H6U6 RNU6-588P-201ENST00000410281 105 ntBASIC2.87□□□□□ -1.95
BCAS3Q9H6U6 AL035461.1-201ENST00000421490 332 ntBASIC2.87□□□□□ -1.95
BCAS3Q9H6U6 MTCO1P44-201ENST00000441935 243 ntBASIC2.87□□□□□ -1.95
BCAS3Q9H6U6 AL357134.1-201ENST00000445848 426 ntBASIC2.87□□□□□ -1.95
BCAS3Q9H6U6 AC016717.1-201ENST00000448918 286 ntBASIC2.87□□□□□ -1.95
BCAS3Q9H6U6 AC245102.2-201ENST00000448956 180 ntBASIC2.87□□□□□ -1.95
BCAS3Q9H6U6 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.87□□□□□ -1.95
BCAS3Q9H6U6 AC080013.2-201ENST00000460866 323 ntBASIC2.87□□□□□ -1.95
BCAS3Q9H6U6 Y_RNA.686-201ENST00000516548 134 ntBASIC2.87□□□□□ -1.95
BCAS3Q9H6U6 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.87□□□□□ -1.95
BCAS3Q9H6U6 AC023043.3-201ENST00000593113 385 ntBASIC2.87□□□□□ -1.95
BCAS3Q9H6U6 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.87□□□□□ -1.95
BCAS3Q9H6U6 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.87□□□□□ -1.95
BCAS3Q9H6U6 AC064859.1-201ENST00000624741 174 ntBASIC2.87□□□□□ -1.95
BCAS3Q9H6U6 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
BCAS3Q9H6U6 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.87□□□□□ -1.95
BCAS3Q9H6U6 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.87□□□□□ -1.95
BCAS3Q9H6U6 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.87□□□□□ -1.95
BCAS3Q9H6U6 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
BCAS3Q9H6U6 RNU1-22P-201ENST00000363334 158 ntBASIC2.86□□□□□ -1.95
BCAS3Q9H6U6 RNY1P11-201ENST00000363759 113 ntBASIC2.86□□□□□ -1.95
BCAS3Q9H6U6 Y_RNA.280-201ENST00000364765 112 ntBASIC2.86□□□□□ -1.95
BCAS3Q9H6U6 MIR27B-201ENST00000385129 97 ntBASIC2.86□□□□□ -1.95
BCAS3Q9H6U6 RNA5SP511-201ENST00000410487 115 ntBASIC2.86□□□□□ -1.95
BCAS3Q9H6U6 RNU6-1328P-201ENST00000410938 106 ntBASIC2.86□□□□□ -1.95
BCAS3Q9H6U6 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.86□□□□□ -1.95
BCAS3Q9H6U6 RNA5SP24-201ENST00000516478 95 ntBASIC2.86□□□□□ -1.95
BCAS3Q9H6U6 SCARNA3-201ENST00000517097 143 ntBASIC2.86□□□□□ -1.95
BCAS3Q9H6U6 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.86□□□□□ -1.95
BCAS3Q9H6U6 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.86□□□□□ -1.95
BCAS3Q9H6U6 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.86□□□□□ -1.95
BCAS3Q9H6U6 MIR2681-201ENST00000581814 105 ntBASIC2.86□□□□□ -1.95
BCAS3Q9H6U6 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.86□□□□□ -1.95
BCAS3Q9H6U6 AC011603.4-201ENST00000611325 277 ntBASIC2.86□□□□□ -1.95
BCAS3Q9H6U6 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.86□□□□□ -1.95
BCAS3Q9H6U6 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
BCAS3Q9H6U6 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.86□□□□□ -1.95
BCAS3Q9H6U6 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
BCAS3Q9H6U6 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
BCAS3Q9H6U6 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.85□□□□□ -1.95
BCAS3Q9H6U6 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
BCAS3Q9H6U6 U8.2-201ENST00000363156 134 ntBASIC2.85□□□□□ -1.95
BCAS3Q9H6U6 RNU4-41P-201ENST00000364426 143 ntBASIC2.85□□□□□ -1.95
BCAS3Q9H6U6 SNORA68.1-201ENST00000364537 132 ntBASIC2.85□□□□□ -1.95
BCAS3Q9H6U6 RNU6-1082P-201ENST00000364574 107 ntBASIC2.85□□□□□ -1.95
BCAS3Q9H6U6 Y_RNA.432-201ENST00000384087 111 ntBASIC2.85□□□□□ -1.95
BCAS3Q9H6U6 HMGN2P18-201ENST00000450680 270 ntBASIC2.85□□□□□ -1.95
BCAS3Q9H6U6 SNORD77.4-201ENST00000516158 81 ntBASIC2.85□□□□□ -1.95
BCAS3Q9H6U6 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.85□□□□□ -1.95
BCAS3Q9H6U6 MIR1248-201ENST00000629190 106 ntBASIC2.85□□□□□ -1.95
BCAS3Q9H6U6 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.84□□□□□ -1.95
BCAS3Q9H6U6 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
BCAS3Q9H6U6 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
BCAS3Q9H6U6 RNU6-1325P-201ENST00000364905 105 ntBASIC2.84□□□□□ -1.95
BCAS3Q9H6U6 RNU6-915P-201ENST00000364943 103 ntBASIC2.84□□□□□ -1.95
BCAS3Q9H6U6 RNU6-418P-201ENST00000384035 107 ntBASIC2.84□□□□□ -1.95
BCAS3Q9H6U6 Y_RNA.587-201ENST00000391210 103 ntBASIC2.84□□□□□ -1.95
BCAS3Q9H6U6 Y_RNA.622-201ENST00000411091 108 ntBASIC2.84□□□□□ -1.95
BCAS3Q9H6U6 AC003685.2-201ENST00000422795 395 ntBASIC2.84□□□□□ -1.95
BCAS3Q9H6U6 AC097462.1-201ENST00000514125 324 ntBASIC2.84□□□□□ -1.95
BCAS3Q9H6U6 RNU6-126P-201ENST00000516685 103 ntBASIC2.84□□□□□ -1.95
BCAS3Q9H6U6 RNU6-63P-201ENST00000516690 95 ntBASIC2.84□□□□□ -1.95
BCAS3Q9H6U6 AC090049.2-201ENST00000550377 109 ntBASIC2.84□□□□□ -1.95
BCAS3Q9H6U6 AC105245.1-201ENST00000581934 244 ntBASIC2.84□□□□□ -1.95
BCAS3Q9H6U6 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
BCAS3Q9H6U6 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.83□□□□□ -1.96
BCAS3Q9H6U6 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
BCAS3Q9H6U6 Y_RNA.332-201ENST00000365271 113 ntBASIC2.83□□□□□ -1.96
BCAS3Q9H6U6 RNU6-438P-201ENST00000365561 103 ntBASIC2.83□□□□□ -1.96
BCAS3Q9H6U6 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
BCAS3Q9H6U6 RN7SKP123-201ENST00000410732 291 ntBASIC2.83□□□□□ -1.96
BCAS3Q9H6U6 RN7SKP192-201ENST00000411291 327 ntBASIC2.83□□□□□ -1.96
BCAS3Q9H6U6 snoU13.15-201ENST00000459407 104 ntBASIC2.83□□□□□ -1.96
BCAS3Q9H6U6 SEM1P1-201ENST00000506694 209 ntBASIC2.83□□□□□ -1.96
BCAS3Q9H6U6 AC093259.1-201ENST00000509755 300 ntBASIC2.83□□□□□ -1.96
BCAS3Q9H6U6 RNU6-1299P-201ENST00000516316 100 ntBASIC2.83□□□□□ -1.96
BCAS3Q9H6U6 NDUFA5P6-201ENST00000542110 379 ntBASIC2.83□□□□□ -1.96
BCAS3Q9H6U6 SNORD53-201ENST00000579969 78 ntBASIC2.83□□□□□ -1.96
BCAS3Q9H6U6 MIR4506-201ENST00000584693 77 ntBASIC2.83□□□□□ -1.96
BCAS3Q9H6U6 AL356280.1-201ENST00000603614 379 ntBASIC2.83□□□□□ -1.96
BCAS3Q9H6U6 uc_338.4-201ENST00000616635 176 ntBASIC2.83□□□□□ -1.96
BCAS3Q9H6U6 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
BCAS3Q9H6U6 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.83□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 131.6 ms