Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
KRTAP4-4Q9BYR3 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
KRTAP4-4Q9BYR3 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
KRTAP4-4Q9BYR3 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
KRTAP4-4Q9BYR3 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
KRTAP4-4Q9BYR3 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC1.08□□□□□ -2.24
KRTAP4-4Q9BYR3 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
KRTAP4-4Q9BYR3 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
KRTAP4-4Q9BYR3 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.08□□□□□ -2.24
KRTAP4-4Q9BYR3 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC1.08□□□□□ -2.24
KRTAP4-4Q9BYR3 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC1.08□□□□□ -2.24
KRTAP4-4Q9BYR3 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC1.08□□□□□ -2.24
KRTAP4-4Q9BYR3 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC1.07□□□□□ -2.24
KRTAP4-4Q9BYR3 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC1.07□□□□□ -2.24
KRTAP4-4Q9BYR3 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
KRTAP4-4Q9BYR3 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC1.07□□□□□ -2.24
KRTAP4-4Q9BYR3 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC1.07□□□□□ -2.24
KRTAP4-4Q9BYR3 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC1.07□□□□□ -2.24
KRTAP4-4Q9BYR3 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC1.07□□□□□ -2.24
KRTAP4-4Q9BYR3 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC1.07□□□□□ -2.24
KRTAP4-4Q9BYR3 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC1.07□□□□□ -2.24
KRTAP4-4Q9BYR3 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
KRTAP4-4Q9BYR3 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC1.07□□□□□ -2.24
KRTAP4-4Q9BYR3 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
KRTAP4-4Q9BYR3 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC1.07□□□□□ -2.24
KRTAP4-4Q9BYR3 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC1.07□□□□□ -2.24
KRTAP4-4Q9BYR3 TEK-205ENST00000615002 4666 ntTSL 5 BASIC1.07□□□□□ -2.24
KRTAP4-4Q9BYR3 ZFHX4-204ENST00000518282 12175 ntAPPRIS ALT2 TSL 5 BASIC1.07□□□□□ -2.24
KRTAP4-4Q9BYR3 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC1.07□□□□□ -2.24
KRTAP4-4Q9BYR3 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC1.07□□□□□ -2.24
KRTAP4-4Q9BYR3 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
KRTAP4-4Q9BYR3 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC1.07□□□□□ -2.24
KRTAP4-4Q9BYR3 MIR323A-201ENST00000362199 86 ntBASIC1.07□□□□□ -2.24
KRTAP4-4Q9BYR3 U3.3-201ENST00000362986 216 ntBASIC1.07□□□□□ -2.24
KRTAP4-4Q9BYR3 SNORA25.3-201ENST00000363205 127 ntBASIC1.07□□□□□ -2.24
KRTAP4-4Q9BYR3 RNU6V-201ENST00000384105 107 ntBASIC1.07□□□□□ -2.24
KRTAP4-4Q9BYR3 RNA5SP284-201ENST00000384547 118 ntBASIC1.07□□□□□ -2.24
KRTAP4-4Q9BYR3 RNU1-77P-201ENST00000390868 162 ntBASIC1.07□□□□□ -2.24
KRTAP4-4Q9BYR3 SNORA17A-201ENST00000391185 133 ntBASIC1.07□□□□□ -2.24
KRTAP4-4Q9BYR3 MIR1203-201ENST00000408812 85 ntBASIC1.07□□□□□ -2.24
KRTAP4-4Q9BYR3 AC017083.1-201ENST00000428093 483 ntBASIC1.07□□□□□ -2.24
KRTAP4-4Q9BYR3 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC1.07□□□□□ -2.24
KRTAP4-4Q9BYR3 SNORD57-201ENST00000448188 72 ntBASIC1.07□□□□□ -2.24
KRTAP4-4Q9BYR3 RN7SL72P-201ENST00000460697 269 ntBASIC1.07□□□□□ -2.24
KRTAP4-4Q9BYR3 RPS23P6-201ENST00000466136 431 ntBASIC1.07□□□□□ -2.24
KRTAP4-4Q9BYR3 AC090543.2-201ENST00000483963 348 ntBASIC1.07□□□□□ -2.24
KRTAP4-4Q9BYR3 RN7SL466P-201ENST00000497546 295 ntBASIC1.07□□□□□ -2.24
KRTAP4-4Q9BYR3 RN7SKP288-201ENST00000516227 268 ntBASIC1.07□□□□□ -2.24
KRTAP4-4Q9BYR3 RN7SKP277-201ENST00000516895 283 ntBASIC1.07□□□□□ -2.24
KRTAP4-4Q9BYR3 SNORA43.3-201ENST00000517240 103 ntBASIC1.07□□□□□ -2.24
KRTAP4-4Q9BYR3 AC024995.1-201ENST00000523014 93 ntBASIC1.07□□□□□ -2.24
KRTAP4-4Q9BYR3 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC1.07□□□□□ -2.24
KRTAP4-4Q9BYR3 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC1.07□□□□□ -2.24
KRTAP4-4Q9BYR3 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC1.07□□□□□ -2.24
KRTAP4-4Q9BYR3 MIR3189-201ENST00000578735 73 ntBASIC1.07□□□□□ -2.24
KRTAP4-4Q9BYR3 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC1.07□□□□□ -2.24
KRTAP4-4Q9BYR3 MIR4765-201ENST00000585007 77 ntBASIC1.07□□□□□ -2.24
KRTAP4-4Q9BYR3 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC1.07□□□□□ -2.24
KRTAP4-4Q9BYR3 MIR132-201ENST00000591554 101 ntBASIC1.07□□□□□ -2.24
KRTAP4-4Q9BYR3 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC1.07□□□□□ -2.24
KRTAP4-4Q9BYR3 AC012493.3-201ENST00000604494 112 ntBASIC1.07□□□□□ -2.24
KRTAP4-4Q9BYR3 AC097467.4-201ENST00000605504 141 ntBASIC1.07□□□□□ -2.24
KRTAP4-4Q9BYR3 uc_338.18-201ENST00000615451 175 ntBASIC1.07□□□□□ -2.24
KRTAP4-4Q9BYR3 MIR6826-201ENST00000617808 98 ntBASIC1.07□□□□□ -2.24
KRTAP4-4Q9BYR3 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC1.07□□□□□ -2.24
KRTAP4-4Q9BYR3 MIR7854-201ENST00000620068 65 ntBASIC1.07□□□□□ -2.24
KRTAP4-4Q9BYR3 AC024884.1-201ENST00000620583 399 ntBASIC1.07□□□□□ -2.24
KRTAP4-4Q9BYR3 AC006065.5-201ENST00000623427 349 ntBASIC1.07□□□□□ -2.24
KRTAP4-4Q9BYR3 CCT5-215ENST00000625723 135 ntTSL 5 BASIC1.07□□□□□ -2.24
KRTAP4-4Q9BYR3 SNORA17.5-201ENST00000630429 132 ntBASIC1.07□□□□□ -2.24
KRTAP4-4Q9BYR3 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC1.07□□□□□ -2.24
KRTAP4-4Q9BYR3 FTO-223ENST00000640179 210 ntTSL 5 BASIC1.07□□□□□ -2.24
KRTAP4-4Q9BYR3 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
KRTAP4-4Q9BYR3 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
KRTAP4-4Q9BYR3 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
KRTAP4-4Q9BYR3 MAPK10-373ENST00000641983 6772 ntBASIC1.07□□□□□ -2.24
KRTAP4-4Q9BYR3 AC092435.4-201ENST00000623012 4159 ntBASIC1.07□□□□□ -2.24
KRTAP4-4Q9BYR3 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
KRTAP4-4Q9BYR3 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC1.07□□□□□ -2.24
KRTAP4-4Q9BYR3 AC008079.2-201ENST00000623543 20396 ntBASIC1.07□□□□□ -2.24
KRTAP4-4Q9BYR3 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC1.07□□□□□ -2.24
KRTAP4-4Q9BYR3 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC1.07□□□□□ -2.24
KRTAP4-4Q9BYR3 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
KRTAP4-4Q9BYR3 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC1.07□□□□□ -2.24
KRTAP4-4Q9BYR3 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC1.07□□□□□ -2.24
KRTAP4-4Q9BYR3 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC1.07□□□□□ -2.24
KRTAP4-4Q9BYR3 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC1.07□□□□□ -2.24
KRTAP4-4Q9BYR3 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC1.07□□□□□ -2.24
KRTAP4-4Q9BYR3 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC1.07□□□□□ -2.24
KRTAP4-4Q9BYR3 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC1.07□□□□□ -2.24
KRTAP4-4Q9BYR3 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
KRTAP4-4Q9BYR3 IARS-206ENST00000447699 4186 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
KRTAP4-4Q9BYR3 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC1.07□□□□□ -2.24
KRTAP4-4Q9BYR3 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
KRTAP4-4Q9BYR3 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC1.07□□□□□ -2.24
KRTAP4-4Q9BYR3 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC1.07□□□□□ -2.24
KRTAP4-4Q9BYR3 AL137141.1-201ENST00000624622 4836 ntBASIC1.06□□□□□ -2.24
KRTAP4-4Q9BYR3 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC1.06□□□□□ -2.24
KRTAP4-4Q9BYR3 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC1.06□□□□□ -2.24
KRTAP4-4Q9BYR3 GUCY1B2-203ENST00000493639 2871 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms