Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC3.36□□□□□ -1.87
CALR3Q96L12 AC069257.2-201ENST00000441819 155 ntBASIC3.36□□□□□ -1.87
CALR3Q96L12 AL133547.1-201ENST00000448546 220 ntBASIC3.36□□□□□ -1.87
CALR3Q96L12 RNU6-1333P-201ENST00000516162 93 ntBASIC3.36□□□□□ -1.87
CALR3Q96L12 RNU6-1234P-201ENST00000516877 103 ntBASIC3.36□□□□□ -1.87
CALR3Q96L12 MIR5094-201ENST00000578766 85 ntBASIC3.36□□□□□ -1.87
CALR3Q96L12 MIR2682-201ENST00000580305 110 ntBASIC3.36□□□□□ -1.87
CALR3Q96L12 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CALR3Q96L12 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CALR3Q96L12 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC3.35□□□□□ -1.87
CALR3Q96L12 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.35□□□□□ -1.87
CALR3Q96L12 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CALR3Q96L12 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CALR3Q96L12 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC3.35□□□□□ -1.87
CALR3Q96L12 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CALR3Q96L12 SNORD61-201ENST00000384252 73 ntBASIC3.35□□□□□ -1.87
CALR3Q96L12 MIR624-201ENST00000385217 97 ntBASIC3.35□□□□□ -1.87
CALR3Q96L12 RNA5SP465-201ENST00000391195 109 ntBASIC3.35□□□□□ -1.87
CALR3Q96L12 PTMAP2-201ENST00000397627 327 ntBASIC3.35□□□□□ -1.87
CALR3Q96L12 MIR1283-2-201ENST00000408621 87 ntBASIC3.35□□□□□ -1.87
CALR3Q96L12 RNU4-57P-201ENST00000515980 135 ntBASIC3.35□□□□□ -1.87
CALR3Q96L12 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.35□□□□□ -1.87
CALR3Q96L12 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.35□□□□□ -1.87
CALR3Q96L12 Y_RNA.757-201ENST00000578934 114 ntBASIC3.35□□□□□ -1.87
CALR3Q96L12 MIR6733-201ENST00000635723 61 ntBASIC3.35□□□□□ -1.87
CALR3Q96L12 MIR622-201ENST00000638396 96 ntBASIC3.35□□□□□ -1.87
CALR3Q96L12 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CALR3Q96L12 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.35□□□□□ -1.87
CALR3Q96L12 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
CALR3Q96L12 RNU6-1084P-201ENST00000362498 107 ntBASIC3.34□□□□□ -1.87
CALR3Q96L12 U8.1-201ENST00000362843 134 ntBASIC3.34□□□□□ -1.87
CALR3Q96L12 RNU6-1290P-201ENST00000362957 109 ntBASIC3.34□□□□□ -1.87
CALR3Q96L12 RNU6-888P-201ENST00000363010 101 ntBASIC3.34□□□□□ -1.87
CALR3Q96L12 Y_RNA.261-201ENST00000364631 102 ntBASIC3.34□□□□□ -1.87
CALR3Q96L12 RNA5SP205-201ENST00000364653 136 ntBASIC3.34□□□□□ -1.87
CALR3Q96L12 SNORD18B-201ENST00000365659 72 ntBASIC3.34□□□□□ -1.87
CALR3Q96L12 MIR518A2-201ENST00000384966 87 ntBASIC3.34□□□□□ -1.87
CALR3Q96L12 HMGN2P35-201ENST00000412164 270 ntBASIC3.34□□□□□ -1.87
CALR3Q96L12 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC3.34□□□□□ -1.87
CALR3Q96L12 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC3.34□□□□□ -1.87
CALR3Q96L12 Y_RNA.666-201ENST00000516187 112 ntBASIC3.34□□□□□ -1.87
CALR3Q96L12 RNU1-104P-201ENST00000517280 175 ntBASIC3.34□□□□□ -1.87
CALR3Q96L12 MIR8054-201ENST00000620877 86 ntBASIC3.34□□□□□ -1.87
CALR3Q96L12 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.34□□□□□ -1.87
CALR3Q96L12 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CALR3Q96L12 RNA5SP50-201ENST00000363731 107 ntBASIC3.33□□□□□ -1.88
CALR3Q96L12 SNORD50B-201ENST00000364995 70 ntBASIC3.33□□□□□ -1.88
CALR3Q96L12 snoU2-30.1-201ENST00000365012 70 ntBASIC3.33□□□□□ -1.88
CALR3Q96L12 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CALR3Q96L12 RNU6-440P-201ENST00000390882 105 ntBASIC3.33□□□□□ -1.88
CALR3Q96L12 HMGN2P3-201ENST00000433603 273 ntBASIC3.33□□□□□ -1.88
CALR3Q96L12 HMGN2P5-201ENST00000436882 273 ntBASIC3.33□□□□□ -1.88
CALR3Q96L12 SNRPGP13-201ENST00000442212 177 ntBASIC3.33□□□□□ -1.88
CALR3Q96L12 AC096725.1-201ENST00000514266 313 ntBASIC3.33□□□□□ -1.88
CALR3Q96L12 Y_RNA.692-201ENST00000516627 105 ntBASIC3.33□□□□□ -1.88
CALR3Q96L12 RNU6-1270P-201ENST00000517128 108 ntBASIC3.33□□□□□ -1.88
CALR3Q96L12 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.33□□□□□ -1.88
CALR3Q96L12 MIR3129-201ENST00000581095 76 ntBASIC3.33□□□□□ -1.88
CALR3Q96L12 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
CALR3Q96L12 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CALR3Q96L12 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.33□□□□□ -1.88
CALR3Q96L12 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
CALR3Q96L12 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CALR3Q96L12 SNORD14E-201ENST00000364009 85 ntBASIC3.32□□□□□ -1.88
CALR3Q96L12 RNU1-109P-201ENST00000383960 147 ntBASIC3.32□□□□□ -1.88
CALR3Q96L12 RNU6-442P-201ENST00000383968 104 ntBASIC3.32□□□□□ -1.88
CALR3Q96L12 SNORA1-201ENST00000384107 130 ntBASIC3.32□□□□□ -1.88
CALR3Q96L12 HMGN2P39-201ENST00000398005 273 ntBASIC3.32□□□□□ -1.88
CALR3Q96L12 RNU6-693P-201ENST00000516134 107 ntBASIC3.32□□□□□ -1.88
CALR3Q96L12 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.32□□□□□ -1.88
CALR3Q96L12 SNORA28-201ENST00000606769 126 ntBASIC3.32□□□□□ -1.88
CALR3Q96L12 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC3.32□□□□□ -1.88
CALR3Q96L12 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
CALR3Q96L12 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.32□□□□□ -1.88
CALR3Q96L12 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
CALR3Q96L12 RNU1-33P-201ENST00000364249 162 ntBASIC3.31□□□□□ -1.88
CALR3Q96L12 RNU6-1292P-201ENST00000383856 107 ntBASIC3.31□□□□□ -1.88
CALR3Q96L12 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.31□□□□□ -1.88
CALR3Q96L12 RNU4ATAC16P-201ENST00000408512 126 ntBASIC3.31□□□□□ -1.88
CALR3Q96L12 RNU6-735P-201ENST00000410612 107 ntBASIC3.31□□□□□ -1.88
CALR3Q96L12 RPS29P4-201ENST00000414733 161 ntBASIC3.31□□□□□ -1.88
CALR3Q96L12 Y_RNA.686-201ENST00000516548 134 ntBASIC3.31□□□□□ -1.88
CALR3Q96L12 AL359881.1-201ENST00000602916 267 ntBASIC3.31□□□□□ -1.88
CALR3Q96L12 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CALR3Q96L12 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.3□□□□□ -1.88
CALR3Q96L12 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
CALR3Q96L12 Y_RNA.629-201ENST00000411368 105 ntBASIC3.3□□□□□ -1.88
CALR3Q96L12 STAG3L5P-204ENST00000443759 179 ntBASIC3.3□□□□□ -1.88
CALR3Q96L12 RNA5SP76-201ENST00000516277 87 ntBASIC3.3□□□□□ -1.88
CALR3Q96L12 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CALR3Q96L12 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
CALR3Q96L12 AC093010.3-201ENST00000570269 15214 ntBASIC3.3□□□□□ -1.88
CALR3Q96L12 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.3□□□□□ -1.88
CALR3Q96L12 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.3□□□□□ -1.88
CALR3Q96L12 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CALR3Q96L12 SNORD15B-201ENST00000384714 146 ntBASIC3.29□□□□□ -1.88
CALR3Q96L12 AL603914.1-201ENST00000401964 204 ntBASIC3.29□□□□□ -1.88
CALR3Q96L12 RNU4-47P-201ENST00000410876 114 ntBASIC3.29□□□□□ -1.88
CALR3Q96L12 AC091390.1-201ENST00000433904 331 ntBASIC3.29□□□□□ -1.88
CALR3Q96L12 SNORD45.4-201ENST00000516629 73 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms