Protein–RNA interactions for Protein: Q96HJ5

MS4A3, Membrane-spanning 4-domains subfamily A member 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A3Q96HJ5 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.09□□□□□ -1.75
MS4A3Q96HJ5 MIR561-201ENST00000385216 97 ntBASIC4.09□□□□□ -1.75
MS4A3Q96HJ5 RNU6-1077P-201ENST00000410506 102 ntBASIC4.09□□□□□ -1.75
MS4A3Q96HJ5 RN7SKP177-201ENST00000410567 355 ntBASIC4.09□□□□□ -1.75
MS4A3Q96HJ5 RNU6-1328P-201ENST00000410938 106 ntBASIC4.09□□□□□ -1.75
MS4A3Q96HJ5 RN7SL354P-201ENST00000469282 294 ntBASIC4.09□□□□□ -1.75
MS4A3Q96HJ5 AC069503.3-201ENST00000618674 145 ntBASIC4.09□□□□□ -1.75
MS4A3Q96HJ5 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.09□□□□□ -1.75
MS4A3Q96HJ5 MAPK10-320ENST00000641462 6696 ntBASIC4.09□□□□□ -1.75
MS4A3Q96HJ5 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.09□□□□□ -1.76
MS4A3Q96HJ5 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.09□□□□□ -1.76
MS4A3Q96HJ5 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC4.09□□□□□ -1.76
MS4A3Q96HJ5 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
MS4A3Q96HJ5 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
MS4A3Q96HJ5 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
MS4A3Q96HJ5 SNORD36A-201ENST00000362874 73 ntBASIC4.08□□□□□ -1.76
MS4A3Q96HJ5 RNU6-829P-201ENST00000363700 112 ntBASIC4.08□□□□□ -1.76
MS4A3Q96HJ5 RNU6-340P-201ENST00000364005 107 ntBASIC4.08□□□□□ -1.76
MS4A3Q96HJ5 RNVU1-6-201ENST00000364688 164 ntBASIC4.08□□□□□ -1.76
MS4A3Q96HJ5 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
MS4A3Q96HJ5 SNORD90-201ENST00000391145 111 ntBASIC4.08□□□□□ -1.76
MS4A3Q96HJ5 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
MS4A3Q96HJ5 MIR298-201ENST00000401212 88 ntBASIC4.08□□□□□ -1.76
MS4A3Q96HJ5 AC006539.3-201ENST00000454258 129 ntBASIC4.08□□□□□ -1.76
MS4A3Q96HJ5 AC008897.1-201ENST00000494006 347 ntBASIC4.08□□□□□ -1.76
MS4A3Q96HJ5 RN7SKP132-201ENST00000516001 208 ntBASIC4.08□□□□□ -1.76
MS4A3Q96HJ5 AC105129.1-201ENST00000560250 297 ntBASIC4.08□□□□□ -1.76
MS4A3Q96HJ5 CYP3A52P-201ENST00000563326 91 ntBASIC4.08□□□□□ -1.76
MS4A3Q96HJ5 MIR3675-201ENST00000583661 73 ntBASIC4.08□□□□□ -1.76
MS4A3Q96HJ5 UCA1.1-201ENST00000620952 75 ntBASIC4.08□□□□□ -1.76
MS4A3Q96HJ5 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.08□□□□□ -1.76
MS4A3Q96HJ5 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
MS4A3Q96HJ5 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.08□□□□□ -1.76
MS4A3Q96HJ5 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
MS4A3Q96HJ5 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
MS4A3Q96HJ5 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
MS4A3Q96HJ5 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
MS4A3Q96HJ5 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
MS4A3Q96HJ5 RNA5SP97-201ENST00000365006 84 ntBASIC4.07□□□□□ -1.76
MS4A3Q96HJ5 RNU6-1237P-201ENST00000384777 107 ntBASIC4.07□□□□□ -1.76
MS4A3Q96HJ5 RNU6-466P-201ENST00000391224 103 ntBASIC4.07□□□□□ -1.76
MS4A3Q96HJ5 Z74021.1-201ENST00000423610 407 ntBASIC4.07□□□□□ -1.76
MS4A3Q96HJ5 AL133547.1-201ENST00000448546 220 ntBASIC4.07□□□□□ -1.76
MS4A3Q96HJ5 AC015912.2-201ENST00000571053 181 ntBASIC4.07□□□□□ -1.76
MS4A3Q96HJ5 MIR4500-201ENST00000579472 76 ntBASIC4.07□□□□□ -1.76
MS4A3Q96HJ5 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC4.07□□□□□ -1.76
MS4A3Q96HJ5 MIR7703-201ENST00000620784 77 ntBASIC4.07□□□□□ -1.76
MS4A3Q96HJ5 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
MS4A3Q96HJ5 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
MS4A3Q96HJ5 ZNF962P-201ENST00000443465 3140 ntBASIC4.07□□□□□ -1.76
MS4A3Q96HJ5 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.07□□□□□ -1.76
MS4A3Q96HJ5 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
MS4A3Q96HJ5 WWP1P1-201ENST00000466609 2769 ntBASIC4.07□□□□□ -1.76
MS4A3Q96HJ5 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
MS4A3Q96HJ5 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
MS4A3Q96HJ5 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.06□□□□□ -1.76
MS4A3Q96HJ5 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
MS4A3Q96HJ5 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
MS4A3Q96HJ5 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
MS4A3Q96HJ5 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
MS4A3Q96HJ5 Y_RNA.42-201ENST00000362660 108 ntBASIC4.06□□□□□ -1.76
MS4A3Q96HJ5 RNU6-1072P-201ENST00000384703 107 ntBASIC4.06□□□□□ -1.76
MS4A3Q96HJ5 RNU6-443P-201ENST00000384780 107 ntBASIC4.06□□□□□ -1.76
MS4A3Q96HJ5 RNU6-1254P-201ENST00000391266 104 ntBASIC4.06□□□□□ -1.76
MS4A3Q96HJ5 AC073264.2-201ENST00000448886 166 ntBASIC4.06□□□□□ -1.76
MS4A3Q96HJ5 AL162591.2-201ENST00000449634 317 ntBASIC4.06□□□□□ -1.76
MS4A3Q96HJ5 Y_RNA.722-201ENST00000517279 114 ntBASIC4.06□□□□□ -1.76
MS4A3Q96HJ5 AC141846.1-201ENST00000568348 142 ntBASIC4.06□□□□□ -1.76
MS4A3Q96HJ5 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC4.06□□□□□ -1.76
MS4A3Q96HJ5 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
MS4A3Q96HJ5 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
MS4A3Q96HJ5 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
MS4A3Q96HJ5 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
MS4A3Q96HJ5 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
MS4A3Q96HJ5 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
MS4A3Q96HJ5 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.06□□□□□ -1.76
MS4A3Q96HJ5 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
MS4A3Q96HJ5 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.05□□□□□ -1.76
MS4A3Q96HJ5 MIRLET7F1-201ENST00000362202 87 ntBASIC4.05□□□□□ -1.76
MS4A3Q96HJ5 RNU6-1216P-201ENST00000362590 107 ntBASIC4.05□□□□□ -1.76
MS4A3Q96HJ5 RNA5SP513-201ENST00000364648 118 ntBASIC4.05□□□□□ -1.76
MS4A3Q96HJ5 RNA5SP505-201ENST00000364748 108 ntBASIC4.05□□□□□ -1.76
MS4A3Q96HJ5 MIR518E-201ENST00000385252 88 ntBASIC4.05□□□□□ -1.76
MS4A3Q96HJ5 RNU6-243P-201ENST00000391140 107 ntBASIC4.05□□□□□ -1.76
MS4A3Q96HJ5 snoU13.17-201ENST00000458802 104 ntBASIC4.05□□□□□ -1.76
MS4A3Q96HJ5 MRPL49P2-201ENST00000521066 465 ntBASIC4.05□□□□□ -1.76
MS4A3Q96HJ5 AC100770.1-201ENST00000532310 322 ntBASIC4.05□□□□□ -1.76
MS4A3Q96HJ5 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
MS4A3Q96HJ5 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.05□□□□□ -1.76
MS4A3Q96HJ5 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.05□□□□□ -1.76
MS4A3Q96HJ5 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
MS4A3Q96HJ5 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
MS4A3Q96HJ5 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
MS4A3Q96HJ5 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
MS4A3Q96HJ5 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC4.04□□□□□ -1.76
MS4A3Q96HJ5 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
MS4A3Q96HJ5 SNORD116-24-201ENST00000384549 92 ntBASIC4.04□□□□□ -1.76
MS4A3Q96HJ5 SNORA26.7-201ENST00000391288 122 ntBASIC4.04□□□□□ -1.76
MS4A3Q96HJ5 AC018868.1-201ENST00000491307 315 ntBASIC4.04□□□□□ -1.76
MS4A3Q96HJ5 IGKV1-32-201ENST00000519290 311 ntBASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms