Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.2□□□□□ -1.9
SHKBP1Q8TBC3 MIR4513-201ENST00000581077 86 ntBASIC3.2□□□□□ -1.9
SHKBP1Q8TBC3 JPX_2.1-201ENST00000614161 69 ntBASIC3.2□□□□□ -1.9
SHKBP1Q8TBC3 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.2□□□□□ -1.9
SHKBP1Q8TBC3 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
SHKBP1Q8TBC3 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SHKBP1Q8TBC3 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SHKBP1Q8TBC3 RNU6-888P-201ENST00000363010 101 ntBASIC3.19□□□□□ -1.9
SHKBP1Q8TBC3 RNY4P6-201ENST00000363667 96 ntBASIC3.19□□□□□ -1.9
SHKBP1Q8TBC3 RNU6-1240P-201ENST00000365155 104 ntBASIC3.19□□□□□ -1.9
SHKBP1Q8TBC3 EEF1A1P41-201ENST00000414667 207 ntBASIC3.19□□□□□ -1.9
SHKBP1Q8TBC3 AC097463.2-201ENST00000421074 142 ntBASIC3.19□□□□□ -1.9
SHKBP1Q8TBC3 SNORA50A-202ENST00000629536 136 ntBASIC3.19□□□□□ -1.9
SHKBP1Q8TBC3 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.19□□□□□ -1.9
SHKBP1Q8TBC3 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
SHKBP1Q8TBC3 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.19□□□□□ -1.9
SHKBP1Q8TBC3 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
SHKBP1Q8TBC3 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.18□□□□□ -1.9
SHKBP1Q8TBC3 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
SHKBP1Q8TBC3 Y_RNA.78-201ENST00000362970 110 ntBASIC3.18□□□□□ -1.9
SHKBP1Q8TBC3 SNORD24-201ENST00000383884 75 ntBASIC3.18□□□□□ -1.9
SHKBP1Q8TBC3 RNU6-418P-201ENST00000384035 107 ntBASIC3.18□□□□□ -1.9
SHKBP1Q8TBC3 SNORD77.3-201ENST00000391113 65 ntBASIC3.18□□□□□ -1.9
SHKBP1Q8TBC3 AC022018.1-201ENST00000430685 241 ntBASIC3.18□□□□□ -1.9
SHKBP1Q8TBC3 RNU7-172P-201ENST00000517125 64 ntBASIC3.18□□□□□ -1.9
SHKBP1Q8TBC3 RNU6-1270P-201ENST00000517128 108 ntBASIC3.18□□□□□ -1.9
SHKBP1Q8TBC3 MIR4298-201ENST00000584380 73 ntBASIC3.18□□□□□ -1.9
SHKBP1Q8TBC3 MIR4438-201ENST00000585271 93 ntBASIC3.18□□□□□ -1.9
SHKBP1Q8TBC3 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC3.18□□□□□ -1.9
SHKBP1Q8TBC3 SNORD115-40-201ENST00000606510 82 ntBASIC3.18□□□□□ -1.9
SHKBP1Q8TBC3 AC013412.1-201ENST00000610687 192 ntBASIC3.18□□□□□ -1.9
SHKBP1Q8TBC3 MALAT1.1-201ENST00000618249 95 ntBASIC3.18□□□□□ -1.9
SHKBP1Q8TBC3 AC090517.3-201ENST00000625170 141 ntBASIC3.18□□□□□ -1.9
SHKBP1Q8TBC3 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.18□□□□□ -1.9
SHKBP1Q8TBC3 AL355596.1-201ENST00000565399 3996 ntBASIC3.18□□□□□ -1.9
SHKBP1Q8TBC3 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SHKBP1Q8TBC3 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC3.18□□□□□ -1.9
SHKBP1Q8TBC3 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.17□□□□□ -1.9
SHKBP1Q8TBC3 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
SHKBP1Q8TBC3 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SHKBP1Q8TBC3 MIR548A2-201ENST00000384956 97 ntBASIC3.17□□□□□ -1.9
SHKBP1Q8TBC3 SNORD78.1-201ENST00000390866 65 ntBASIC3.17□□□□□ -1.9
SHKBP1Q8TBC3 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.17□□□□□ -1.9
SHKBP1Q8TBC3 RNU2-37P-201ENST00000410695 177 ntBASIC3.17□□□□□ -1.9
SHKBP1Q8TBC3 AL513477.1-202ENST00000417061 214 ntBASIC3.17□□□□□ -1.9
SHKBP1Q8TBC3 RNU6-240P-201ENST00000516098 97 ntBASIC3.17□□□□□ -1.9
SHKBP1Q8TBC3 RNA5SP380-201ENST00000517190 98 ntBASIC3.17□□□□□ -1.9
SHKBP1Q8TBC3 IGKV3-31-201ENST00000523109 329 ntBASIC3.17□□□□□ -1.9
SHKBP1Q8TBC3 AC068339.1-201ENST00000526965 141 ntBASIC3.17□□□□□ -1.9
SHKBP1Q8TBC3 MIR4672-201ENST00000583126 81 ntBASIC3.17□□□□□ -1.9
SHKBP1Q8TBC3 AC134878.1-201ENST00000619901 243 ntBASIC3.17□□□□□ -1.9
SHKBP1Q8TBC3 AC025521.1-201ENST00000621624 286 ntBASIC3.17□□□□□ -1.9
SHKBP1Q8TBC3 AC073476.4-201ENST00000628409 72 ntBASIC3.17□□□□□ -1.9
SHKBP1Q8TBC3 MIR2052-201ENST00000636055 55 ntBASIC3.17□□□□□ -1.9
SHKBP1Q8TBC3 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.17□□□□□ -1.9
SHKBP1Q8TBC3 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SHKBP1Q8TBC3 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
SHKBP1Q8TBC3 AC073325.2-201ENST00000339545 159 ntBASIC3.16□□□□□ -1.9
SHKBP1Q8TBC3 RNU6-944P-201ENST00000364023 107 ntBASIC3.16□□□□□ -1.9
SHKBP1Q8TBC3 Y_RNA.219-201ENST00000364232 113 ntBASIC3.16□□□□□ -1.9
SHKBP1Q8TBC3 AL135938.1-201ENST00000443141 297 ntBASIC3.16□□□□□ -1.9
SHKBP1Q8TBC3 AC109327.2-201ENST00000448339 378 ntBASIC3.16□□□□□ -1.9
SHKBP1Q8TBC3 AC092185.1-201ENST00000491371 97 ntBASIC3.16□□□□□ -1.9
SHKBP1Q8TBC3 RPS26P48-201ENST00000491713 339 ntBASIC3.16□□□□□ -1.9
SHKBP1Q8TBC3 AC091826.1-201ENST00000514065 313 ntBASIC3.16□□□□□ -1.9
SHKBP1Q8TBC3 RNU6-904P-201ENST00000516206 101 ntBASIC3.16□□□□□ -1.9
SHKBP1Q8TBC3 AC006023.1-201ENST00000603944 259 ntBASIC3.16□□□□□ -1.9
SHKBP1Q8TBC3 AC002076.2-201ENST00000617362 122 ntBASIC3.16□□□□□ -1.9
SHKBP1Q8TBC3 XIST_intron.1-201ENST00000619444 68 ntBASIC3.16□□□□□ -1.9
SHKBP1Q8TBC3 MIR376A2-201ENST00000636782 80 ntBASIC3.16□□□□□ -1.9
SHKBP1Q8TBC3 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SHKBP1Q8TBC3 RNU6-1274P-201ENST00000384557 107 ntBASIC3.15□□□□□ -1.91
SHKBP1Q8TBC3 HSPE1P26-201ENST00000405341 275 ntBASIC3.15□□□□□ -1.91
SHKBP1Q8TBC3 Z98742.2-201ENST00000431564 187 ntBASIC3.15□□□□□ -1.91
SHKBP1Q8TBC3 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.15□□□□□ -1.91
SHKBP1Q8TBC3 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.15□□□□□ -1.91
SHKBP1Q8TBC3 RNU6-830P-201ENST00000516353 107 ntBASIC3.15□□□□□ -1.91
SHKBP1Q8TBC3 RNU2-58P-201ENST00000516403 183 ntBASIC3.15□□□□□ -1.91
SHKBP1Q8TBC3 RNY4P20-201ENST00000516678 93 ntBASIC3.15□□□□□ -1.91
SHKBP1Q8TBC3 AC015726.2-201ENST00000620112 122 ntBASIC3.15□□□□□ -1.91
SHKBP1Q8TBC3 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.14□□□□□ -1.91
SHKBP1Q8TBC3 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.14□□□□□ -1.91
SHKBP1Q8TBC3 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
SHKBP1Q8TBC3 MIR494-201ENST00000349529 81 ntBASIC3.14□□□□□ -1.91
SHKBP1Q8TBC3 RNU6-414P-201ENST00000363705 104 ntBASIC3.14□□□□□ -1.91
SHKBP1Q8TBC3 Y_RNA.213-201ENST00000364178 111 ntBASIC3.14□□□□□ -1.91
SHKBP1Q8TBC3 MT-TI-201ENST00000387365 69 ntBASIC3.14□□□□□ -1.91
SHKBP1Q8TBC3 RPS29P21-201ENST00000496272 170 ntBASIC3.14□□□□□ -1.91
SHKBP1Q8TBC3 RNA5SP217-201ENST00000515959 91 ntBASIC3.14□□□□□ -1.91
SHKBP1Q8TBC3 Y_RNA.666-201ENST00000516187 112 ntBASIC3.14□□□□□ -1.91
SHKBP1Q8TBC3 RNU6-1146P-201ENST00000516282 102 ntBASIC3.14□□□□□ -1.91
SHKBP1Q8TBC3 RNU6-1096P-201ENST00000517089 102 ntBASIC3.14□□□□□ -1.91
SHKBP1Q8TBC3 GTF3AP2-201ENST00000557014 266 ntBASIC3.14□□□□□ -1.91
SHKBP1Q8TBC3 AC090115.4-201ENST00000609970 188 ntBASIC3.14□□□□□ -1.91
SHKBP1Q8TBC3 AL035425.3-201ENST00000564206 4996 ntBASIC3.14□□□□□ -1.91
SHKBP1Q8TBC3 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
SHKBP1Q8TBC3 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
SHKBP1Q8TBC3 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
SHKBP1Q8TBC3 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
SHKBP1Q8TBC3 MIR302B-201ENST00000362188 73 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 128.2 ms