Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
HCFC2Q9Y5Z7 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC2.91□□□□□ -1.94
HCFC2Q9Y5Z7 SNORA25.7-201ENST00000364375 127 ntBASIC2.9□□□□□ -1.95
HCFC2Q9Y5Z7 RNU4-41P-201ENST00000364426 143 ntBASIC2.9□□□□□ -1.95
HCFC2Q9Y5Z7 RNU6-1240P-201ENST00000365155 104 ntBASIC2.9□□□□□ -1.95
HCFC2Q9Y5Z7 SNORA67.4-201ENST00000384688 142 ntBASIC2.9□□□□□ -1.95
HCFC2Q9Y5Z7 Y_RNA.584-201ENST00000391090 114 ntBASIC2.9□□□□□ -1.95
HCFC2Q9Y5Z7 Y_RNA.587-201ENST00000391210 103 ntBASIC2.9□□□□□ -1.95
HCFC2Q9Y5Z7 RNA5SP247-201ENST00000411181 105 ntBASIC2.9□□□□□ -1.95
HCFC2Q9Y5Z7 RPL30P4-201ENST00000429309 333 ntBASIC2.9□□□□□ -1.95
HCFC2Q9Y5Z7 AC092185.1-201ENST00000491371 97 ntBASIC2.9□□□□□ -1.95
HCFC2Q9Y5Z7 SCARNA17.1-201ENST00000516211 143 ntBASIC2.9□□□□□ -1.95
HCFC2Q9Y5Z7 SCARNA17.2-201ENST00000516334 143 ntBASIC2.9□□□□□ -1.95
HCFC2Q9Y5Z7 RNA5SP148-201ENST00000516527 94 ntBASIC2.9□□□□□ -1.95
HCFC2Q9Y5Z7 RNU6-126P-201ENST00000516685 103 ntBASIC2.9□□□□□ -1.95
HCFC2Q9Y5Z7 CYCSP26-201ENST00000534107 320 ntBASIC2.9□□□□□ -1.95
HCFC2Q9Y5Z7 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC2.9□□□□□ -1.95
HCFC2Q9Y5Z7 Y_RNA.757-201ENST00000578934 114 ntBASIC2.9□□□□□ -1.95
HCFC2Q9Y5Z7 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.9□□□□□ -1.95
HCFC2Q9Y5Z7 AC090115.4-201ENST00000609970 188 ntBASIC2.9□□□□□ -1.95
HCFC2Q9Y5Z7 SCARNA17.4-201ENST00000614296 143 ntBASIC2.9□□□□□ -1.95
HCFC2Q9Y5Z7 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC2.9□□□□□ -1.95
HCFC2Q9Y5Z7 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
HCFC2Q9Y5Z7 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
HCFC2Q9Y5Z7 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
HCFC2Q9Y5Z7 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC2.89□□□□□ -1.95
HCFC2Q9Y5Z7 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC2.89□□□□□ -1.95
HCFC2Q9Y5Z7 RNY1P11-201ENST00000363759 113 ntBASIC2.89□□□□□ -1.95
HCFC2Q9Y5Z7 RNA5SP139-201ENST00000364340 117 ntBASIC2.89□□□□□ -1.95
HCFC2Q9Y5Z7 RNU6-1082P-201ENST00000364574 107 ntBASIC2.89□□□□□ -1.95
HCFC2Q9Y5Z7 Y_RNA.280-201ENST00000364765 112 ntBASIC2.89□□□□□ -1.95
HCFC2Q9Y5Z7 RNA5SP511-201ENST00000410487 115 ntBASIC2.89□□□□□ -1.95
HCFC2Q9Y5Z7 RNU6-1064P-201ENST00000410626 104 ntBASIC2.89□□□□□ -1.95
HCFC2Q9Y5Z7 AC016909.1-201ENST00000415916 166 ntBASIC2.89□□□□□ -1.95
HCFC2Q9Y5Z7 AC009969.1-201ENST00000438726 172 ntBASIC2.89□□□□□ -1.95
HCFC2Q9Y5Z7 AL357134.1-201ENST00000445848 426 ntBASIC2.89□□□□□ -1.95
HCFC2Q9Y5Z7 AC016717.1-201ENST00000448918 286 ntBASIC2.89□□□□□ -1.95
HCFC2Q9Y5Z7 AC096725.1-201ENST00000514266 313 ntBASIC2.89□□□□□ -1.95
HCFC2Q9Y5Z7 RNU6-1299P-201ENST00000516316 100 ntBASIC2.89□□□□□ -1.95
HCFC2Q9Y5Z7 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.89□□□□□ -1.95
HCFC2Q9Y5Z7 FAM35CP-201ENST00000554755 2470 ntBASIC2.89□□□□□ -1.95
HCFC2Q9Y5Z7 AL355596.1-201ENST00000565399 3996 ntBASIC2.89□□□□□ -1.95
HCFC2Q9Y5Z7 AC110079.1-202ENST00000635213 138 ntBASIC2.89□□□□□ -1.95
HCFC2Q9Y5Z7 MIR7153-201ENST00000637758 57 ntBASIC2.89□□□□□ -1.95
HCFC2Q9Y5Z7 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.89□□□□□ -1.95
HCFC2Q9Y5Z7 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
HCFC2Q9Y5Z7 Y_RNA.120-201ENST00000363304 110 ntBASIC2.88□□□□□ -1.95
HCFC2Q9Y5Z7 RNU4-13P-201ENST00000364019 141 ntBASIC2.88□□□□□ -1.95
HCFC2Q9Y5Z7 DYNLT3P1-201ENST00000378574 347 ntBASIC2.88□□□□□ -1.95
HCFC2Q9Y5Z7 SNORA46-201ENST00000384762 135 ntBASIC2.88□□□□□ -1.95
HCFC2Q9Y5Z7 AC245102.2-201ENST00000448956 180 ntBASIC2.88□□□□□ -1.95
HCFC2Q9Y5Z7 RAC1P5-201ENST00000512182 576 ntBASIC2.88□□□□□ -1.95
HCFC2Q9Y5Z7 SNORD77.4-201ENST00000516158 81 ntBASIC2.88□□□□□ -1.95
HCFC2Q9Y5Z7 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.88□□□□□ -1.95
HCFC2Q9Y5Z7 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.88□□□□□ -1.95
HCFC2Q9Y5Z7 AC023043.3-201ENST00000593113 385 ntBASIC2.88□□□□□ -1.95
HCFC2Q9Y5Z7 UCA1.1-201ENST00000620952 75 ntBASIC2.88□□□□□ -1.95
HCFC2Q9Y5Z7 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
HCFC2Q9Y5Z7 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
HCFC2Q9Y5Z7 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.87□□□□□ -1.95
HCFC2Q9Y5Z7 MAPK10-266ENST00000641066 6555 ntBASIC2.87□□□□□ -1.95
HCFC2Q9Y5Z7 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
HCFC2Q9Y5Z7 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.87□□□□□ -1.95
HCFC2Q9Y5Z7 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.87□□□□□ -1.95
HCFC2Q9Y5Z7 RNA5SP383-201ENST00000362934 120 ntBASIC2.87□□□□□ -1.95
HCFC2Q9Y5Z7 RNU1-22P-201ENST00000363334 158 ntBASIC2.87□□□□□ -1.95
HCFC2Q9Y5Z7 MIR512-1-201ENST00000384913 84 ntBASIC2.87□□□□□ -1.95
HCFC2Q9Y5Z7 MIR95-201ENST00000385072 81 ntBASIC2.87□□□□□ -1.95
HCFC2Q9Y5Z7 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC2.87□□□□□ -1.95
HCFC2Q9Y5Z7 RPL39P40-201ENST00000445481 146 ntBASIC2.87□□□□□ -1.95
HCFC2Q9Y5Z7 MRPS36P2-201ENST00000512569 299 ntBASIC2.87□□□□□ -1.95
HCFC2Q9Y5Z7 RNA5SP24-201ENST00000516478 95 ntBASIC2.87□□□□□ -1.95
HCFC2Q9Y5Z7 RNU6-63P-201ENST00000516690 95 ntBASIC2.87□□□□□ -1.95
HCFC2Q9Y5Z7 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.87□□□□□ -1.95
HCFC2Q9Y5Z7 SNORD53-201ENST00000579969 78 ntBASIC2.87□□□□□ -1.95
HCFC2Q9Y5Z7 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.87□□□□□ -1.95
HCFC2Q9Y5Z7 AC064859.1-201ENST00000624741 174 ntBASIC2.87□□□□□ -1.95
HCFC2Q9Y5Z7 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.87□□□□□ -1.95
HCFC2Q9Y5Z7 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.87□□□□□ -1.95
HCFC2Q9Y5Z7 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.86□□□□□ -1.95
HCFC2Q9Y5Z7 Y_RNA.203-201ENST00000364106 102 ntBASIC2.86□□□□□ -1.95
HCFC2Q9Y5Z7 RNU6-438P-201ENST00000365561 103 ntBASIC2.86□□□□□ -1.95
HCFC2Q9Y5Z7 RNU6-1080P-201ENST00000383982 107 ntBASIC2.86□□□□□ -1.95
HCFC2Q9Y5Z7 RNU6-1144P-201ENST00000384247 104 ntBASIC2.86□□□□□ -1.95
HCFC2Q9Y5Z7 RNU6-476P-201ENST00000384726 107 ntBASIC2.86□□□□□ -1.95
HCFC2Q9Y5Z7 SNORA26-201ENST00000391286 122 ntBASIC2.86□□□□□ -1.95
HCFC2Q9Y5Z7 AL158823.1-201ENST00000418441 478 ntBASIC2.86□□□□□ -1.95
HCFC2Q9Y5Z7 MTCO1P44-201ENST00000441935 243 ntBASIC2.86□□□□□ -1.95
HCFC2Q9Y5Z7 AC023449.1-201ENST00000454464 154 ntBASIC2.86□□□□□ -1.95
HCFC2Q9Y5Z7 RNU7-107P-201ENST00000459121 61 ntBASIC2.86□□□□□ -1.95
HCFC2Q9Y5Z7 AC080013.2-201ENST00000460866 323 ntBASIC2.86□□□□□ -1.95
HCFC2Q9Y5Z7 AC097462.1-201ENST00000514125 324 ntBASIC2.86□□□□□ -1.95
HCFC2Q9Y5Z7 Y_RNA.692-201ENST00000516627 105 ntBASIC2.86□□□□□ -1.95
HCFC2Q9Y5Z7 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.86□□□□□ -1.95
HCFC2Q9Y5Z7 AL031274.2-201ENST00000599419 203 ntBASIC2.86□□□□□ -1.95
HCFC2Q9Y5Z7 uc_338.4-201ENST00000616635 176 ntBASIC2.86□□□□□ -1.95
HCFC2Q9Y5Z7 MIR3914-2-201ENST00000637339 95 ntBASIC2.86□□□□□ -1.95
HCFC2Q9Y5Z7 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.86□□□□□ -1.95
HCFC2Q9Y5Z7 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.86□□□□□ -1.95
HCFC2Q9Y5Z7 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 182.8 ms