Protein–RNA interactions for Protein: Q9Y3Q4

HCN4, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN4Q9Y3Q4 UGP2-230ENST00000626380 276 ntTSL 5 BASIC3.56□□□□□ -1.84
HCN4Q9Y3Q4 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC3.56□□□□□ -1.84
HCN4Q9Y3Q4 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
HCN4Q9Y3Q4 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
HCN4Q9Y3Q4 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
HCN4Q9Y3Q4 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.56□□□□□ -1.84
HCN4Q9Y3Q4 Y_RNA.35-201ENST00000362601 101 ntBASIC3.55□□□□□ -1.84
HCN4Q9Y3Q4 RNU6-508P-201ENST00000363231 103 ntBASIC3.55□□□□□ -1.84
HCN4Q9Y3Q4 Y_RNA.651-201ENST00000459380 103 ntBASIC3.55□□□□□ -1.84
HCN4Q9Y3Q4 RNA5SP208-201ENST00000516156 78 ntBASIC3.55□□□□□ -1.84
HCN4Q9Y3Q4 RNU6-781P-201ENST00000516377 101 ntBASIC3.55□□□□□ -1.84
HCN4Q9Y3Q4 AC007751.1-201ENST00000529260 376 ntBASIC3.55□□□□□ -1.84
HCN4Q9Y3Q4 AL022345.2-201ENST00000606307 135 ntBASIC3.55□□□□□ -1.84
HCN4Q9Y3Q4 AL121890.5-201ENST00000620848 304 ntBASIC3.55□□□□□ -1.84
HCN4Q9Y3Q4 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
HCN4Q9Y3Q4 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
HCN4Q9Y3Q4 MIR1253-201ENST00000408273 105 ntBASIC3.54□□□□□ -1.84
HCN4Q9Y3Q4 AL161788.1-201ENST00000441805 169 ntBASIC3.54□□□□□ -1.84
HCN4Q9Y3Q4 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC3.54□□□□□ -1.84
HCN4Q9Y3Q4 RNU6-1096P-201ENST00000517089 102 ntBASIC3.54□□□□□ -1.84
HCN4Q9Y3Q4 MIR7515-201ENST00000637837 67 ntBASIC3.54□□□□□ -1.84
HCN4Q9Y3Q4 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.54□□□□□ -1.84
HCN4Q9Y3Q4 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
HCN4Q9Y3Q4 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC3.53□□□□□ -1.84
HCN4Q9Y3Q4 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.53□□□□□ -1.84
HCN4Q9Y3Q4 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
HCN4Q9Y3Q4 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.53□□□□□ -1.84
HCN4Q9Y3Q4 RNU6-1292P-201ENST00000383856 107 ntBASIC3.53□□□□□ -1.84
HCN4Q9Y3Q4 RNU11-5P-201ENST00000391216 129 ntBASIC3.53□□□□□ -1.84
HCN4Q9Y3Q4 AF228730.3-201ENST00000436691 102 ntBASIC3.53□□□□□ -1.84
HCN4Q9Y3Q4 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC3.53□□□□□ -1.84
HCN4Q9Y3Q4 CYP2C59P-201ENST00000457790 269 ntBASIC3.53□□□□□ -1.84
HCN4Q9Y3Q4 RNU6-1146P-201ENST00000516282 102 ntBASIC3.53□□□□□ -1.84
HCN4Q9Y3Q4 AC025166.1-201ENST00000612411 163 ntBASIC3.53□□□□□ -1.84
HCN4Q9Y3Q4 AP003355.3-201ENST00000623465 114 ntBASIC3.53□□□□□ -1.84
HCN4Q9Y3Q4 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.53□□□□□ -1.84
HCN4Q9Y3Q4 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
HCN4Q9Y3Q4 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.52□□□□□ -1.85
HCN4Q9Y3Q4 MIR184-201ENST00000384962 84 ntBASIC3.52□□□□□ -1.85
HCN4Q9Y3Q4 MIR218-1-201ENST00000384999 110 ntBASIC3.52□□□□□ -1.85
HCN4Q9Y3Q4 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
HCN4Q9Y3Q4 AC060773.1-201ENST00000421698 310 ntBASIC3.52□□□□□ -1.85
HCN4Q9Y3Q4 Y_RNA.649-201ENST00000459077 103 ntBASIC3.52□□□□□ -1.85
HCN4Q9Y3Q4 NDUFA4P2-201ENST00000489989 244 ntBASIC3.52□□□□□ -1.85
HCN4Q9Y3Q4 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.52□□□□□ -1.85
HCN4Q9Y3Q4 RNVU1-4-201ENST00000612985 164 ntBASIC3.52□□□□□ -1.85
HCN4Q9Y3Q4 SNORA50A-202ENST00000629536 136 ntBASIC3.52□□□□□ -1.85
HCN4Q9Y3Q4 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
HCN4Q9Y3Q4 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
HCN4Q9Y3Q4 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
HCN4Q9Y3Q4 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.51□□□□□ -1.85
HCN4Q9Y3Q4 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
HCN4Q9Y3Q4 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
HCN4Q9Y3Q4 MIR340-201ENST00000362125 95 ntBASIC3.51□□□□□ -1.85
HCN4Q9Y3Q4 SNORA68.1-201ENST00000364537 132 ntBASIC3.51□□□□□ -1.85
HCN4Q9Y3Q4 RNU6-880P-201ENST00000384526 107 ntBASIC3.51□□□□□ -1.85
HCN4Q9Y3Q4 RNA5SP89-201ENST00000410300 108 ntBASIC3.51□□□□□ -1.85
HCN4Q9Y3Q4 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.51□□□□□ -1.85
HCN4Q9Y3Q4 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.51□□□□□ -1.85
HCN4Q9Y3Q4 AL021397.1-201ENST00000451806 248 ntBASIC3.51□□□□□ -1.85
HCN4Q9Y3Q4 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.51□□□□□ -1.85
HCN4Q9Y3Q4 RNU6-168P-201ENST00000516189 101 ntBASIC3.51□□□□□ -1.85
HCN4Q9Y3Q4 RNU7-99P-201ENST00000516271 62 ntBASIC3.51□□□□□ -1.85
HCN4Q9Y3Q4 U4.6-201ENST00000621618 127 ntBASIC3.51□□□□□ -1.85
HCN4Q9Y3Q4 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
HCN4Q9Y3Q4 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.51□□□□□ -1.85
HCN4Q9Y3Q4 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
HCN4Q9Y3Q4 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
HCN4Q9Y3Q4 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
HCN4Q9Y3Q4 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
HCN4Q9Y3Q4 RNU2-48P-201ENST00000410694 191 ntBASIC3.5□□□□□ -1.85
HCN4Q9Y3Q4 RNA5SP184-201ENST00000411071 108 ntBASIC3.5□□□□□ -1.85
HCN4Q9Y3Q4 AC002075.2-201ENST00000425207 252 ntBASIC3.5□□□□□ -1.85
HCN4Q9Y3Q4 HMGN1P7-201ENST00000491722 313 ntBASIC3.5□□□□□ -1.85
HCN4Q9Y3Q4 AC091826.1-201ENST00000514065 313 ntBASIC3.5□□□□□ -1.85
HCN4Q9Y3Q4 IGKV2-26-201ENST00000518305 343 ntBASIC3.5□□□□□ -1.85
HCN4Q9Y3Q4 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.5□□□□□ -1.85
HCN4Q9Y3Q4 MIR3199-1-201ENST00000582434 88 ntBASIC3.5□□□□□ -1.85
HCN4Q9Y3Q4 ELOCP29-201ENST00000588193 334 ntBASIC3.5□□□□□ -1.85
HCN4Q9Y3Q4 AL356280.1-201ENST00000603614 379 ntBASIC3.5□□□□□ -1.85
HCN4Q9Y3Q4 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.5□□□□□ -1.85
HCN4Q9Y3Q4 MTND5P18-201ENST00000445624 1801 ntBASIC3.49□□□□□ -1.85
HCN4Q9Y3Q4 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.49□□□□□ -1.85
HCN4Q9Y3Q4 SNORD24-201ENST00000383884 75 ntBASIC3.49□□□□□ -1.85
HCN4Q9Y3Q4 SNORA1-201ENST00000384107 130 ntBASIC3.49□□□□□ -1.85
HCN4Q9Y3Q4 FO393413.1-201ENST00000402892 195 ntBASIC3.49□□□□□ -1.85
HCN4Q9Y3Q4 snoU13.23-201ENST00000458863 104 ntBASIC3.49□□□□□ -1.85
HCN4Q9Y3Q4 SEM1P1-201ENST00000506694 209 ntBASIC3.49□□□□□ -1.85
HCN4Q9Y3Q4 MRPS17P9-201ENST00000511924 393 ntBASIC3.49□□□□□ -1.85
HCN4Q9Y3Q4 RNA5SP236-201ENST00000516169 116 ntBASIC3.49□□□□□ -1.85
HCN4Q9Y3Q4 SNORA48.11-201ENST00000517015 89 ntBASIC3.49□□□□□ -1.85
HCN4Q9Y3Q4 AC073413.2-201ENST00000604332 360 ntBASIC3.49□□□□□ -1.85
HCN4Q9Y3Q4 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.49□□□□□ -1.85
HCN4Q9Y3Q4 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
HCN4Q9Y3Q4 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.48□□□□□ -1.85
HCN4Q9Y3Q4 AC008555.8-201ENST00000623602 2168 ntBASIC3.48□□□□□ -1.85
HCN4Q9Y3Q4 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
HCN4Q9Y3Q4 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
HCN4Q9Y3Q4 RNU6-743P-201ENST00000364151 106 ntBASIC3.48□□□□□ -1.85
HCN4Q9Y3Q4 MIR548A1-201ENST00000385041 97 ntBASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms