Protein–RNA interactions for Protein: Q9NY93

DDX56, Probable ATP-dependent RNA helicase DDX56, humanhuman

Known RBP Predictions only

Length 547 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56Q9NY93 RNA5SP109-201ENST00000391010 116 ntBASIC2.33□□□□□ -2.04
DDX56Q9NY93 MIR1302-6-201ENST00000408466 90 ntBASIC2.33□□□□□ -2.04
DDX56Q9NY93 RNU6-1203P-201ENST00000410703 110 ntBASIC2.33□□□□□ -2.04
DDX56Q9NY93 AC079804.2-201ENST00000490376 200 ntBASIC2.33□□□□□ -2.04
DDX56Q9NY93 AL162424.1-201ENST00000602325 221 ntBASIC2.33□□□□□ -2.04
DDX56Q9NY93 MIR8074-201ENST00000615081 81 ntBASIC2.33□□□□□ -2.04
DDX56Q9NY93 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
DDX56Q9NY93 ZNF720P1-201ENST00000562403 1939 ntBASIC2.32□□□□□ -2.04
DDX56Q9NY93 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
DDX56Q9NY93 AL356292.1-201ENST00000283110 373 ntBASIC2.32□□□□□ -2.04
DDX56Q9NY93 RNU4-13P-201ENST00000364019 141 ntBASIC2.32□□□□□ -2.04
DDX56Q9NY93 RNU6-290P-201ENST00000365212 101 ntBASIC2.32□□□□□ -2.04
DDX56Q9NY93 RNU6-117P-201ENST00000365415 107 ntBASIC2.32□□□□□ -2.04
DDX56Q9NY93 RNU6-472P-201ENST00000384299 107 ntBASIC2.32□□□□□ -2.04
DDX56Q9NY93 Y_RNA.483-201ENST00000384380 101 ntBASIC2.32□□□□□ -2.04
DDX56Q9NY93 SNORA67.4-201ENST00000384688 142 ntBASIC2.32□□□□□ -2.04
DDX56Q9NY93 Y_RNA.569-201ENST00000384749 103 ntBASIC2.32□□□□□ -2.04
DDX56Q9NY93 RNA5SP489-201ENST00000410986 109 ntBASIC2.32□□□□□ -2.04
DDX56Q9NY93 TRBVB-201ENST00000477100 408 ntBASIC2.32□□□□□ -2.04
DDX56Q9NY93 RNU6-1337P-201ENST00000516525 95 ntBASIC2.32□□□□□ -2.04
DDX56Q9NY93 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC2.32□□□□□ -2.04
DDX56Q9NY93 MIR4503-201ENST00000582187 83 ntBASIC2.32□□□□□ -2.04
DDX56Q9NY93 AC022217.4-201ENST00000604389 163 ntBASIC2.32□□□□□ -2.04
DDX56Q9NY93 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
DDX56Q9NY93 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
DDX56Q9NY93 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.31□□□□□ -2.04
DDX56Q9NY93 RNU6-196P-201ENST00000384315 107 ntBASIC2.31□□□□□ -2.04
DDX56Q9NY93 MIR30A-201ENST00000385092 71 ntBASIC2.31□□□□□ -2.04
DDX56Q9NY93 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
DDX56Q9NY93 SNORA48.3-201ENST00000391081 134 ntBASIC2.31□□□□□ -2.04
DDX56Q9NY93 MIR1302-3-201ENST00000408128 138 ntBASIC2.31□□□□□ -2.04
DDX56Q9NY93 MTND4LP30-201ENST00000454092 297 ntBASIC2.31□□□□□ -2.04
DDX56Q9NY93 RNU7-34P-201ENST00000459394 64 ntBASIC2.31□□□□□ -2.04
DDX56Q9NY93 RNA5SP200-201ENST00000516360 103 ntBASIC2.31□□□□□ -2.04
DDX56Q9NY93 SCARNA24.2-201ENST00000516968 130 ntBASIC2.31□□□□□ -2.04
DDX56Q9NY93 RNU6-341P-201ENST00000516973 96 ntBASIC2.31□□□□□ -2.04
DDX56Q9NY93 AC091544.4-201ENST00000555268 342 ntBASIC2.31□□□□□ -2.04
DDX56Q9NY93 MIR3198-2-201ENST00000577868 80 ntBASIC2.31□□□□□ -2.04
DDX56Q9NY93 SNORA28-201ENST00000606769 126 ntBASIC2.31□□□□□ -2.04
DDX56Q9NY93 MIR6132-201ENST00000622083 109 ntBASIC2.31□□□□□ -2.04
DDX56Q9NY93 TTK-211ENST00000627129 240 ntTSL 5 BASIC2.31□□□□□ -2.04
DDX56Q9NY93 AL136360.1-201ENST00000503377 1900 ntBASIC2.3□□□□□ -2.04
DDX56Q9NY93 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
DDX56Q9NY93 Y_RNA.144-201ENST00000363521 113 ntBASIC2.3□□□□□ -2.04
DDX56Q9NY93 Y_RNA.418-201ENST00000384029 102 ntBASIC2.3□□□□□ -2.04
DDX56Q9NY93 RNU6-463P-201ENST00000384340 107 ntBASIC2.3□□□□□ -2.04
DDX56Q9NY93 MIR221-201ENST00000385135 110 ntBASIC2.3□□□□□ -2.04
DDX56Q9NY93 MIR1267-201ENST00000408723 78 ntBASIC2.3□□□□□ -2.04
DDX56Q9NY93 RPS27P1-201ENST00000450552 247 ntBASIC2.3□□□□□ -2.04
DDX56Q9NY93 RNA5SP281-201ENST00000516504 135 ntBASIC2.3□□□□□ -2.04
DDX56Q9NY93 RNU2-56P-201ENST00000516826 190 ntBASIC2.3□□□□□ -2.04
DDX56Q9NY93 DEFB108E-201ENST00000524692 240 ntBASIC2.3□□□□□ -2.04
DDX56Q9NY93 AC103810.8-201ENST00000607347 118 ntBASIC2.3□□□□□ -2.04
DDX56Q9NY93 MIR8054-201ENST00000620877 86 ntBASIC2.3□□□□□ -2.04
DDX56Q9NY93 NAA50-211ENST00000630058 177 ntTSL 5 BASIC2.3□□□□□ -2.04
DDX56Q9NY93 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.3□□□□□ -2.04
DDX56Q9NY93 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
DDX56Q9NY93 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
DDX56Q9NY93 RNU4-80P-201ENST00000363200 141 ntBASIC2.29□□□□□ -2.04
DDX56Q9NY93 AL034345.1-201ENST00000407768 123 ntBASIC2.29□□□□□ -2.04
DDX56Q9NY93 RNU6-855P-201ENST00000410395 104 ntBASIC2.29□□□□□ -2.04
DDX56Q9NY93 AC091021.1-201ENST00000468051 388 ntBASIC2.29□□□□□ -2.04
DDX56Q9NY93 RNU6-1338P-201ENST00000516328 91 ntBASIC2.29□□□□□ -2.04
DDX56Q9NY93 AL358944.1-201ENST00000528537 144 ntBASIC2.29□□□□□ -2.04
DDX56Q9NY93 AP002004.2-201ENST00000531656 154 ntBASIC2.29□□□□□ -2.04
DDX56Q9NY93 AC037487.3-201ENST00000606668 112 ntBASIC2.29□□□□□ -2.04
DDX56Q9NY93 AP001282.2-201ENST00000616149 309 ntBASIC2.29□□□□□ -2.04
DDX56Q9NY93 7SK.10-201ENST00000621414 298 ntBASIC2.29□□□□□ -2.04
DDX56Q9NY93 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
DDX56Q9NY93 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.29□□□□□ -2.04
DDX56Q9NY93 Y_RNA.172-201ENST00000363765 102 ntBASIC2.28□□□□□ -2.04
DDX56Q9NY93 Y_RNA.237-201ENST00000364439 102 ntBASIC2.28□□□□□ -2.04
DDX56Q9NY93 RNU6-440P-201ENST00000390882 105 ntBASIC2.28□□□□□ -2.04
DDX56Q9NY93 HMGN2P38-201ENST00000423806 265 ntBASIC2.28□□□□□ -2.04
DDX56Q9NY93 AL162725.1-201ENST00000435405 301 ntBASIC2.28□□□□□ -2.04
DDX56Q9NY93 JTBP1-201ENST00000441314 247 ntBASIC2.28□□□□□ -2.04
DDX56Q9NY93 RNU6-63P-201ENST00000516690 95 ntBASIC2.28□□□□□ -2.04
DDX56Q9NY93 RNU7-28P-201ENST00000516759 62 ntBASIC2.28□□□□□ -2.04
DDX56Q9NY93 RNU2-31P-201ENST00000516954 155 ntBASIC2.28□□□□□ -2.04
DDX56Q9NY93 U6.104-201ENST00000637979 90 ntBASIC2.28□□□□□ -2.04
DDX56Q9NY93 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.28□□□□□ -2.04
DDX56Q9NY93 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
DDX56Q9NY93 AL391987.6-201ENST00000305671 199 ntBASIC2.27□□□□□ -2.05
DDX56Q9NY93 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
DDX56Q9NY93 Y_RNA.267-201ENST00000364679 109 ntBASIC2.27□□□□□ -2.05
DDX56Q9NY93 RNU6-326P-201ENST00000365480 107 ntBASIC2.27□□□□□ -2.05
DDX56Q9NY93 Y_RNA.456-201ENST00000384232 111 ntBASIC2.27□□□□□ -2.05
DDX56Q9NY93 RNU6-136P-201ENST00000384663 107 ntBASIC2.27□□□□□ -2.05
DDX56Q9NY93 SNORA53-201ENST00000391141 249 ntBASIC2.27□□□□□ -2.05
DDX56Q9NY93 MTCO1P5-201ENST00000433573 344 ntBASIC2.27□□□□□ -2.05
DDX56Q9NY93 AL606517.2-201ENST00000442855 241 ntBASIC2.27□□□□□ -2.05
DDX56Q9NY93 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.27□□□□□ -2.05
DDX56Q9NY93 AC090255.1-201ENST00000495779 349 ntBASIC2.27□□□□□ -2.05
DDX56Q9NY93 RNU6-1096P-201ENST00000517089 102 ntBASIC2.27□□□□□ -2.05
DDX56Q9NY93 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC2.27□□□□□ -2.05
DDX56Q9NY93 U4.1-201ENST00000620349 87 ntBASIC2.27□□□□□ -2.05
DDX56Q9NY93 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
DDX56Q9NY93 RNA5SP289-201ENST00000362332 137 ntBASIC2.26□□□□□ -2.05
DDX56Q9NY93 Y_RNA.136-201ENST00000363444 102 ntBASIC2.26□□□□□ -2.05
DDX56Q9NY93 SNORA4.2-201ENST00000365313 147 ntBASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 169.7 ms