Protein–RNA interactions for Protein: Q9H4L4

SENP3, Sentrin-specific protease 3, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3Q9H4L4 RNA5SP299-201ENST00000391203 116 ntBASIC6.71□□□□□ -1.34
SENP3Q9H4L4 SNORA11.4-201ENST00000408823 129 ntBASIC6.71□□□□□ -1.34
SENP3Q9H4L4 RN7SKP17-201ENST00000411242 351 ntBASIC6.71□□□□□ -1.34
SENP3Q9H4L4 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
SENP3Q9H4L4 MRPS21P3-201ENST00000436696 262 ntBASIC6.71□□□□□ -1.34
SENP3Q9H4L4 SNORA74C-1-201ENST00000580726 201 ntBASIC6.71□□□□□ -1.34
SENP3Q9H4L4 MIR4696-201ENST00000581431 70 ntBASIC6.71□□□□□ -1.34
SENP3Q9H4L4 U4.6-201ENST00000621618 127 ntBASIC6.71□□□□□ -1.34
SENP3Q9H4L4 TRDV1-202ENST00000621643 102 ntBASIC6.71□□□□□ -1.34
SENP3Q9H4L4 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC6.71□□□□□ -1.34
SENP3Q9H4L4 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.34
SENP3Q9H4L4 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
SENP3Q9H4L4 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
SENP3Q9H4L4 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC6.7□□□□□ -1.34
SENP3Q9H4L4 SNORA63.1-201ENST00000362493 131 ntBASIC6.7□□□□□ -1.34
SENP3Q9H4L4 SNORD101-201ENST00000384027 73 ntBASIC6.7□□□□□ -1.34
SENP3Q9H4L4 SCARNA14-201ENST00000516903 136 ntBASIC6.7□□□□□ -1.34
SENP3Q9H4L4 MIR7853-201ENST00000584820 132 ntBASIC6.7□□□□□ -1.34
SENP3Q9H4L4 AC006111.3-201ENST00000622137 383 ntBASIC6.7□□□□□ -1.34
SENP3Q9H4L4 AC023934.1-201ENST00000574529 2389 ntBASIC6.7□□□□□ -1.34
SENP3Q9H4L4 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
SENP3Q9H4L4 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
SENP3Q9H4L4 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
SENP3Q9H4L4 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
SENP3Q9H4L4 MAPK10-328ENST00000641553 4009 ntBASIC6.69□□□□□ -1.34
SENP3Q9H4L4 AC093578.1-201ENST00000415219 368 ntBASIC6.69□□□□□ -1.34
SENP3Q9H4L4 AL157831.1-201ENST00000426134 473 ntBASIC6.69□□□□□ -1.34
SENP3Q9H4L4 IST1-227ENST00000626438 126 ntTSL 5 BASIC6.69□□□□□ -1.34
SENP3Q9H4L4 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
SENP3Q9H4L4 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
SENP3Q9H4L4 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC6.69□□□□□ -1.34
SENP3Q9H4L4 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC6.69□□□□□ -1.34
SENP3Q9H4L4 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC6.69□□□□□ -1.34
SENP3Q9H4L4 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
SENP3Q9H4L4 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
SENP3Q9H4L4 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
SENP3Q9H4L4 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC6.68□□□□□ -1.34
SENP3Q9H4L4 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC6.68□□□□□ -1.34
SENP3Q9H4L4 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
SENP3Q9H4L4 AL606490.4-201ENST00000423117 127 ntBASIC6.68□□□□□ -1.34
SENP3Q9H4L4 RPS29P17-201ENST00000430795 166 ntBASIC6.68□□□□□ -1.34
SENP3Q9H4L4 PRSS3P4-201ENST00000453323 162 ntBASIC6.68□□□□□ -1.34
SENP3Q9H4L4 MIR548AO-201ENST00000579992 96 ntBASIC6.68□□□□□ -1.34
SENP3Q9H4L4 MIR3200-201ENST00000580767 85 ntBASIC6.68□□□□□ -1.34
SENP3Q9H4L4 AC008133.2-201ENST00000624540 351 ntBASIC6.68□□□□□ -1.34
SENP3Q9H4L4 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC6.68□□□□□ -1.34
SENP3Q9H4L4 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
SENP3Q9H4L4 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
SENP3Q9H4L4 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC6.67□□□□□ -1.34
SENP3Q9H4L4 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
SENP3Q9H4L4 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
SENP3Q9H4L4 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
SENP3Q9H4L4 RNU6ATAC5P-201ENST00000388104 126 ntBASIC6.67□□□□□ -1.34
SENP3Q9H4L4 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC6.67□□□□□ -1.34
SENP3Q9H4L4 RNU1-6P-201ENST00000516290 144 ntBASIC6.67□□□□□ -1.34
SENP3Q9H4L4 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
SENP3Q9H4L4 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
SENP3Q9H4L4 AC026523.2-201ENST00000625039 7739 ntBASIC6.67□□□□□ -1.34
SENP3Q9H4L4 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC6.67□□□□□ -1.34
SENP3Q9H4L4 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
SENP3Q9H4L4 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
SENP3Q9H4L4 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
SENP3Q9H4L4 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC6.66□□□□□ -1.34
SENP3Q9H4L4 RNU6-1072P-201ENST00000384703 107 ntBASIC6.66□□□□□ -1.34
SENP3Q9H4L4 RNU6-443P-201ENST00000384780 107 ntBASIC6.66□□□□□ -1.34
SENP3Q9H4L4 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC6.66□□□□□ -1.34
SENP3Q9H4L4 HMGN2P16-201ENST00000456802 261 ntBASIC6.66□□□□□ -1.34
SENP3Q9H4L4 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC6.66□□□□□ -1.34
SENP3Q9H4L4 MUC2-202ENST00000613187 4845 ntBASIC6.66□□□□□ -1.34
SENP3Q9H4L4 MED23-203ENST00000368058 4576 ntTSL 5 BASIC6.66□□□□□ -1.34
SENP3Q9H4L4 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
SENP3Q9H4L4 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC6.66□□□□□ -1.34
SENP3Q9H4L4 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC6.65□□□□□ -1.34
SENP3Q9H4L4 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
SENP3Q9H4L4 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.34
SENP3Q9H4L4 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC6.65□□□□□ -1.34
SENP3Q9H4L4 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC6.65□□□□□ -1.34
SENP3Q9H4L4 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
SENP3Q9H4L4 SNORA71.2-201ENST00000364941 134 ntBASIC6.65□□□□□ -1.34
SENP3Q9H4L4 RPS29P7-201ENST00000439662 171 ntBASIC6.65□□□□□ -1.34
SENP3Q9H4L4 MIR3199-1-201ENST00000582434 88 ntBASIC6.65□□□□□ -1.34
SENP3Q9H4L4 RNU6-92P-201ENST00000605893 104 ntBASIC6.65□□□□□ -1.34
SENP3Q9H4L4 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
SENP3Q9H4L4 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
SENP3Q9H4L4 AP002512.4-202ENST00000641599 4530 ntBASIC6.65□□□□□ -1.35
SENP3Q9H4L4 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
SENP3Q9H4L4 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
SENP3Q9H4L4 AC104623.2-202ENST00000623477 4002 ntBASIC6.64□□□□□ -1.35
SENP3Q9H4L4 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
SENP3Q9H4L4 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
SENP3Q9H4L4 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC6.64□□□□□ -1.35
SENP3Q9H4L4 RNA5SP187-201ENST00000384400 119 ntBASIC6.64□□□□□ -1.35
SENP3Q9H4L4 AC017083.1-201ENST00000428093 483 ntBASIC6.64□□□□□ -1.35
SENP3Q9H4L4 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC6.64□□□□□ -1.35
SENP3Q9H4L4 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
SENP3Q9H4L4 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
SENP3Q9H4L4 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
SENP3Q9H4L4 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC6.64□□□□□ -1.35
SENP3Q9H4L4 AC007159.1-201ENST00000566529 4706 ntBASIC6.64□□□□□ -1.35
SENP3Q9H4L4 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 134.7 ms