Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
COL25A1Q9BXS0 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
COL25A1Q9BXS0 MIR147B-201ENST00000390185 80 ntBASIC3.6□□□□□ -1.83
COL25A1Q9BXS0 RNU6-887P-201ENST00000410660 100 ntBASIC3.6□□□□□ -1.83
COL25A1Q9BXS0 RPS29P21-201ENST00000496272 170 ntBASIC3.6□□□□□ -1.83
COL25A1Q9BXS0 MIR449C-201ENST00000516047 92 ntBASIC3.6□□□□□ -1.83
COL25A1Q9BXS0 Y_RNA.705-201ENST00000516862 110 ntBASIC3.6□□□□□ -1.83
COL25A1Q9BXS0 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
COL25A1Q9BXS0 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
COL25A1Q9BXS0 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
COL25A1Q9BXS0 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
COL25A1Q9BXS0 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.6□□□□□ -1.83
COL25A1Q9BXS0 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC3.6□□□□□ -1.83
COL25A1Q9BXS0 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
COL25A1Q9BXS0 AC011266.1-201ENST00000624119 3569 ntBASIC3.59□□□□□ -1.83
COL25A1Q9BXS0 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
COL25A1Q9BXS0 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
COL25A1Q9BXS0 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
COL25A1Q9BXS0 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.83
COL25A1Q9BXS0 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC3.59□□□□□ -1.83
COL25A1Q9BXS0 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.83
COL25A1Q9BXS0 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
COL25A1Q9BXS0 RNU6-661P-201ENST00000362409 107 ntBASIC3.59□□□□□ -1.83
COL25A1Q9BXS0 SNORD115-19-201ENST00000363098 82 ntBASIC3.59□□□□□ -1.83
COL25A1Q9BXS0 SNORD115-18-201ENST00000363293 82 ntBASIC3.59□□□□□ -1.83
COL25A1Q9BXS0 SNORD115-17-201ENST00000364612 82 ntBASIC3.59□□□□□ -1.83
COL25A1Q9BXS0 RNU6-409P-201ENST00000384114 104 ntBASIC3.59□□□□□ -1.83
COL25A1Q9BXS0 RNU6-1235P-201ENST00000384559 107 ntBASIC3.59□□□□□ -1.83
COL25A1Q9BXS0 MIR605-201ENST00000385078 83 ntBASIC3.59□□□□□ -1.83
COL25A1Q9BXS0 RNA5SP424-201ENST00000390988 115 ntBASIC3.59□□□□□ -1.83
COL25A1Q9BXS0 MIR1287-201ENST00000408492 90 ntBASIC3.59□□□□□ -1.83
COL25A1Q9BXS0 Y_RNA.607-201ENST00000410597 98 ntBASIC3.59□□□□□ -1.83
COL25A1Q9BXS0 Y_RNA.621-201ENST00000411065 96 ntBASIC3.59□□□□□ -1.83
COL25A1Q9BXS0 RPL32P35-201ENST00000415214 394 ntBASIC3.59□□□□□ -1.83
COL25A1Q9BXS0 RPS12P18-201ENST00000442381 270 ntBASIC3.59□□□□□ -1.83
COL25A1Q9BXS0 AC010099.1-201ENST00000455434 375 ntBASIC3.59□□□□□ -1.83
COL25A1Q9BXS0 RNU6-498P-201ENST00000459468 107 ntBASIC3.59□□□□□ -1.83
COL25A1Q9BXS0 AC112771.1-201ENST00000463581 102 ntBASIC3.59□□□□□ -1.83
COL25A1Q9BXS0 AP000873.1-201ENST00000463987 400 ntBASIC3.59□□□□□ -1.83
COL25A1Q9BXS0 SNRPGP3-201ENST00000469405 227 ntBASIC3.59□□□□□ -1.83
COL25A1Q9BXS0 AC108210.2-201ENST00000503681 201 ntBASIC3.59□□□□□ -1.83
COL25A1Q9BXS0 RNU7-70P-201ENST00000516941 66 ntBASIC3.59□□□□□ -1.83
COL25A1Q9BXS0 DEFB122-202ENST00000569013 197 ntBASIC3.59□□□□□ -1.83
COL25A1Q9BXS0 ELOCP29-201ENST00000588193 334 ntBASIC3.59□□□□□ -1.83
COL25A1Q9BXS0 MIR7154-201ENST00000620673 73 ntBASIC3.59□□□□□ -1.83
COL25A1Q9BXS0 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.59□□□□□ -1.83
COL25A1Q9BXS0 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.59□□□□□ -1.84
COL25A1Q9BXS0 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
COL25A1Q9BXS0 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
COL25A1Q9BXS0 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.58□□□□□ -1.84
COL25A1Q9BXS0 Y_RNA.95-201ENST00000363079 95 ntBASIC3.58□□□□□ -1.84
COL25A1Q9BXS0 RNU1-96P-201ENST00000364163 162 ntBASIC3.58□□□□□ -1.84
COL25A1Q9BXS0 Y_RNA.242-201ENST00000364473 110 ntBASIC3.58□□□□□ -1.84
COL25A1Q9BXS0 Y_RNA.253-201ENST00000364562 112 ntBASIC3.58□□□□□ -1.84
COL25A1Q9BXS0 SNORD45B-201ENST00000364617 72 ntBASIC3.58□□□□□ -1.84
COL25A1Q9BXS0 Y_RNA.508-201ENST00000384502 114 ntBASIC3.58□□□□□ -1.84
COL25A1Q9BXS0 RNY1P4-201ENST00000384595 115 ntBASIC3.58□□□□□ -1.84
COL25A1Q9BXS0 Y_RNA.565-201ENST00000384719 101 ntBASIC3.58□□□□□ -1.84
COL25A1Q9BXS0 MIR764-201ENST00000390811 85 ntBASIC3.58□□□□□ -1.84
COL25A1Q9BXS0 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
COL25A1Q9BXS0 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC3.58□□□□□ -1.84
COL25A1Q9BXS0 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC3.58□□□□□ -1.84
COL25A1Q9BXS0 AC008011.1-201ENST00000545989 227 ntBASIC3.58□□□□□ -1.84
COL25A1Q9BXS0 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.58□□□□□ -1.84
COL25A1Q9BXS0 AC073413.2-201ENST00000604332 360 ntBASIC3.58□□□□□ -1.84
COL25A1Q9BXS0 Y_RNA.773-201ENST00000607168 90 ntBASIC3.58□□□□□ -1.84
COL25A1Q9BXS0 MIR548BB-201ENST00000626714 66 ntBASIC3.58□□□□□ -1.84
COL25A1Q9BXS0 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
COL25A1Q9BXS0 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.58□□□□□ -1.84
COL25A1Q9BXS0 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.58□□□□□ -1.84
COL25A1Q9BXS0 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
COL25A1Q9BXS0 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
COL25A1Q9BXS0 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.58□□□□□ -1.84
COL25A1Q9BXS0 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
COL25A1Q9BXS0 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
COL25A1Q9BXS0 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
COL25A1Q9BXS0 SNORD31B-201ENST00000364977 69 ntBASIC3.57□□□□□ -1.84
COL25A1Q9BXS0 Y_RNA.316-201ENST00000365118 111 ntBASIC3.57□□□□□ -1.84
COL25A1Q9BXS0 MIR520G-201ENST00000385064 90 ntBASIC3.57□□□□□ -1.84
COL25A1Q9BXS0 AL353813.1-201ENST00000440700 253 ntBASIC3.57□□□□□ -1.84
COL25A1Q9BXS0 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.57□□□□□ -1.84
COL25A1Q9BXS0 HMGN2P7-201ENST00000456186 273 ntBASIC3.57□□□□□ -1.84
COL25A1Q9BXS0 AC010401.1-201ENST00000463867 348 ntBASIC3.57□□□□□ -1.84
COL25A1Q9BXS0 SCGB1D5P-201ENST00000515134 247 ntBASIC3.57□□□□□ -1.84
COL25A1Q9BXS0 Y_RNA.659-201ENST00000515994 113 ntBASIC3.57□□□□□ -1.84
COL25A1Q9BXS0 RNU6-1006P-201ENST00000516998 103 ntBASIC3.57□□□□□ -1.84
COL25A1Q9BXS0 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.57□□□□□ -1.84
COL25A1Q9BXS0 MIR203B-201ENST00000636080 86 ntBASIC3.57□□□□□ -1.84
COL25A1Q9BXS0 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
COL25A1Q9BXS0 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC3.57□□□□□ -1.84
COL25A1Q9BXS0 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
COL25A1Q9BXS0 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
COL25A1Q9BXS0 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
COL25A1Q9BXS0 AC010889.1-201ENST00000566193 2666 ntBASIC3.57□□□□□ -1.84
COL25A1Q9BXS0 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
COL25A1Q9BXS0 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
COL25A1Q9BXS0 AC062016.1-201ENST00000355719 319 ntBASIC3.56□□□□□ -1.84
COL25A1Q9BXS0 RNU6-1229P-201ENST00000364295 107 ntBASIC3.56□□□□□ -1.84
COL25A1Q9BXS0 RNU4-67P-201ENST00000364569 141 ntBASIC3.56□□□□□ -1.84
COL25A1Q9BXS0 MIR93-201ENST00000385024 80 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms