Protein–RNA interactions for Protein: Q6ZMV5

PPP4R3CP, Putative SMEK homolog 3, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3CPQ6ZMV5 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC5.36□□□□□ -1.55
PPP4R3CPQ6ZMV5 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
PPP4R3CPQ6ZMV5 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
PPP4R3CPQ6ZMV5 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
PPP4R3CPQ6ZMV5 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
PPP4R3CPQ6ZMV5 WWP1P1-201ENST00000466609 2769 ntBASIC5.35□□□□□ -1.55
PPP4R3CPQ6ZMV5 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
PPP4R3CPQ6ZMV5 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.35□□□□□ -1.55
PPP4R3CPQ6ZMV5 Y_RNA.283-201ENST00000364798 112 ntBASIC5.35□□□□□ -1.55
PPP4R3CPQ6ZMV5 RNU6-1254P-201ENST00000391266 104 ntBASIC5.35□□□□□ -1.55
PPP4R3CPQ6ZMV5 AC017083.1-201ENST00000428093 483 ntBASIC5.35□□□□□ -1.55
PPP4R3CPQ6ZMV5 AL162151.2-201ENST00000448875 158 ntBASIC5.35□□□□□ -1.55
PPP4R3CPQ6ZMV5 APOA2-207ENST00000470459 416 ntTSL 5 BASIC5.35□□□□□ -1.55
PPP4R3CPQ6ZMV5 AC023424.1-201ENST00000496058 459 ntBASIC5.35□□□□□ -1.55
PPP4R3CPQ6ZMV5 SCARNA16.3-201ENST00000516595 184 ntBASIC5.35□□□□□ -1.55
PPP4R3CPQ6ZMV5 RNU4ATAC9P-201ENST00000517146 126 ntBASIC5.35□□□□□ -1.55
PPP4R3CPQ6ZMV5 RNU6-709P-201ENST00000517257 104 ntBASIC5.35□□□□□ -1.55
PPP4R3CPQ6ZMV5 AC104027.1-201ENST00000521887 300 ntBASIC5.35□□□□□ -1.55
PPP4R3CPQ6ZMV5 AC138749.4-201ENST00000563970 127 ntBASIC5.35□□□□□ -1.55
PPP4R3CPQ6ZMV5 MIR3936-201ENST00000584304 110 ntBASIC5.35□□□□□ -1.55
PPP4R3CPQ6ZMV5 MIR8069-1-201ENST00000616627 86 ntBASIC5.35□□□□□ -1.55
PPP4R3CPQ6ZMV5 AC022149.2-201ENST00000621061 203 ntBASIC5.35□□□□□ -1.55
PPP4R3CPQ6ZMV5 MIR8069-2-201ENST00000621412 86 ntBASIC5.35□□□□□ -1.55
PPP4R3CPQ6ZMV5 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
PPP4R3CPQ6ZMV5 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.35□□□□□ -1.55
PPP4R3CPQ6ZMV5 AL161722.3-201ENST00000605789 2983 ntBASIC5.35□□□□□ -1.55
PPP4R3CPQ6ZMV5 AC107068.1-201ENST00000563286 4218 ntBASIC5.35□□□□□ -1.55
PPP4R3CPQ6ZMV5 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC5.35□□□□□ -1.55
PPP4R3CPQ6ZMV5 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
PPP4R3CPQ6ZMV5 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
PPP4R3CPQ6ZMV5 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
PPP4R3CPQ6ZMV5 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.34□□□□□ -1.55
PPP4R3CPQ6ZMV5 AL136164.3-201ENST00000624429 3978 ntBASIC5.34□□□□□ -1.55
PPP4R3CPQ6ZMV5 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC5.34□□□□□ -1.55
PPP4R3CPQ6ZMV5 RNA5SP191-201ENST00000362585 102 ntBASIC5.34□□□□□ -1.55
PPP4R3CPQ6ZMV5 RNU1-70P-201ENST00000362618 164 ntBASIC5.34□□□□□ -1.55
PPP4R3CPQ6ZMV5 SNORD36A-201ENST00000362874 73 ntBASIC5.34□□□□□ -1.55
PPP4R3CPQ6ZMV5 RNU1-83P-201ENST00000363426 164 ntBASIC5.34□□□□□ -1.55
PPP4R3CPQ6ZMV5 RNU6-75P-201ENST00000515944 104 ntBASIC5.34□□□□□ -1.55
PPP4R3CPQ6ZMV5 SCARNA14-201ENST00000516903 136 ntBASIC5.34□□□□□ -1.55
PPP4R3CPQ6ZMV5 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
PPP4R3CPQ6ZMV5 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
PPP4R3CPQ6ZMV5 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
PPP4R3CPQ6ZMV5 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
PPP4R3CPQ6ZMV5 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
PPP4R3CPQ6ZMV5 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
PPP4R3CPQ6ZMV5 MIR29C-201ENST00000385231 88 ntBASIC5.33□□□□□ -1.56
PPP4R3CPQ6ZMV5 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
PPP4R3CPQ6ZMV5 RNU6-630P-201ENST00000391258 106 ntBASIC5.33□□□□□ -1.56
PPP4R3CPQ6ZMV5 BX276092.1-201ENST00000427368 251 ntBASIC5.33□□□□□ -1.56
PPP4R3CPQ6ZMV5 RPS29P22-201ENST00000472363 168 ntBASIC5.33□□□□□ -1.56
PPP4R3CPQ6ZMV5 SCARNA22-201ENST00000503991 125 ntBASIC5.33□□□□□ -1.56
PPP4R3CPQ6ZMV5 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC5.33□□□□□ -1.56
PPP4R3CPQ6ZMV5 AC209154.1-201ENST00000582156 337 ntBASIC5.33□□□□□ -1.56
PPP4R3CPQ6ZMV5 AL121932.1-201ENST00000605542 214 ntBASIC5.33□□□□□ -1.56
PPP4R3CPQ6ZMV5 AL022401.1-201ENST00000619498 108 ntBASIC5.33□□□□□ -1.56
PPP4R3CPQ6ZMV5 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PPP4R3CPQ6ZMV5 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
PPP4R3CPQ6ZMV5 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
PPP4R3CPQ6ZMV5 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PPP4R3CPQ6ZMV5 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PPP4R3CPQ6ZMV5 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PPP4R3CPQ6ZMV5 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PPP4R3CPQ6ZMV5 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.32□□□□□ -1.56
PPP4R3CPQ6ZMV5 RNU1-101P-201ENST00000391171 127 ntBASIC5.32□□□□□ -1.56
PPP4R3CPQ6ZMV5 MIR942-201ENST00000401111 86 ntBASIC5.32□□□□□ -1.56
PPP4R3CPQ6ZMV5 HMGN2P7-201ENST00000456186 273 ntBASIC5.32□□□□□ -1.56
PPP4R3CPQ6ZMV5 RN7SKP46-201ENST00000515942 234 ntBASIC5.32□□□□□ -1.56
PPP4R3CPQ6ZMV5 RNA5SP497-201ENST00000516081 97 ntBASIC5.32□□□□□ -1.56
PPP4R3CPQ6ZMV5 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PPP4R3CPQ6ZMV5 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.32□□□□□ -1.56
PPP4R3CPQ6ZMV5 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.31□□□□□ -1.56
PPP4R3CPQ6ZMV5 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
PPP4R3CPQ6ZMV5 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC5.31□□□□□ -1.56
PPP4R3CPQ6ZMV5 RNU6-466P-201ENST00000391224 103 ntBASIC5.31□□□□□ -1.56
PPP4R3CPQ6ZMV5 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC5.31□□□□□ -1.56
PPP4R3CPQ6ZMV5 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC5.31□□□□□ -1.56
PPP4R3CPQ6ZMV5 MIR548AO-201ENST00000579992 96 ntBASIC5.31□□□□□ -1.56
PPP4R3CPQ6ZMV5 MIR4764-201ENST00000580680 88 ntBASIC5.31□□□□□ -1.56
PPP4R3CPQ6ZMV5 MIR4270-201ENST00000581799 70 ntBASIC5.31□□□□□ -1.56
PPP4R3CPQ6ZMV5 MIR3616-201ENST00000584070 92 ntBASIC5.31□□□□□ -1.56
PPP4R3CPQ6ZMV5 AC022726.1-201ENST00000587475 207 ntBASIC5.31□□□□□ -1.56
PPP4R3CPQ6ZMV5 MIR6780A-201ENST00000615089 68 ntBASIC5.31□□□□□ -1.56
PPP4R3CPQ6ZMV5 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.31□□□□□ -1.56
PPP4R3CPQ6ZMV5 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
PPP4R3CPQ6ZMV5 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
PPP4R3CPQ6ZMV5 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC5.3□□□□□ -1.56
PPP4R3CPQ6ZMV5 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC5.3□□□□□ -1.56
PPP4R3CPQ6ZMV5 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC5.3□□□□□ -1.56
PPP4R3CPQ6ZMV5 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PPP4R3CPQ6ZMV5 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
PPP4R3CPQ6ZMV5 HMGN2P39-201ENST00000398005 273 ntBASIC5.3□□□□□ -1.56
PPP4R3CPQ6ZMV5 RN7SL459P-201ENST00000481078 302 ntBASIC5.3□□□□□ -1.56
PPP4R3CPQ6ZMV5 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC5.3□□□□□ -1.56
PPP4R3CPQ6ZMV5 AC021506.2-201ENST00000612354 169 ntBASIC5.3□□□□□ -1.56
PPP4R3CPQ6ZMV5 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PPP4R3CPQ6ZMV5 SNORA25.4-201ENST00000363666 124 ntBASIC5.29□□□□□ -1.56
PPP4R3CPQ6ZMV5 MIR1271-201ENST00000408537 86 ntBASIC5.29□□□□□ -1.56
PPP4R3CPQ6ZMV5 Y_RNA.625-201ENST00000411256 107 ntBASIC5.29□□□□□ -1.56
PPP4R3CPQ6ZMV5 AL117339.2-201ENST00000430475 180 ntBASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 178.4 ms