Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 MIR4635-201ENST00000583759 79 ntBASIC2.4□□□□□ -2.03
CLRN1P58418 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.4□□□□□ -2.03
CLRN1P58418 AC007229.1-201ENST00000590455 412 ntBASIC2.4□□□□□ -2.03
CLRN1P58418 AL929325.1-201ENST00000603096 117 ntBASIC2.4□□□□□ -2.03
CLRN1P58418 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.4□□□□□ -2.03
CLRN1P58418 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
CLRN1P58418 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.39□□□□□ -2.03
CLRN1P58418 SNORD115-3-201ENST00000363100 82 ntBASIC2.39□□□□□ -2.03
CLRN1P58418 VTRNA1-1-201ENST00000363120 99 ntBASIC2.39□□□□□ -2.03
CLRN1P58418 RNU6-674P-201ENST00000363831 107 ntBASIC2.39□□□□□ -2.03
CLRN1P58418 RNU4-84P-201ENST00000364200 139 ntBASIC2.39□□□□□ -2.03
CLRN1P58418 RNU6-1130P-201ENST00000365434 107 ntBASIC2.39□□□□□ -2.03
CLRN1P58418 RNA5SP21-201ENST00000410917 96 ntBASIC2.39□□□□□ -2.03
CLRN1P58418 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.39□□□□□ -2.03
CLRN1P58418 ATP5J2P3-201ENST00000451550 258 ntBASIC2.39□□□□□ -2.03
CLRN1P58418 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.39□□□□□ -2.03
CLRN1P58418 RN7SL297P-201ENST00000483161 293 ntBASIC2.39□□□□□ -2.03
CLRN1P58418 RNU7-128P-201ENST00000517247 62 ntBASIC2.39□□□□□ -2.03
CLRN1P58418 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC2.39□□□□□ -2.03
CLRN1P58418 AC026271.5-201ENST00000577873 130 ntBASIC2.39□□□□□ -2.03
CLRN1P58418 AL353149.1-201ENST00000610667 244 ntBASIC2.39□□□□□ -2.03
CLRN1P58418 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.39□□□□□ -2.03
CLRN1P58418 SCARNA15.3-201ENST00000626315 122 ntBASIC2.39□□□□□ -2.03
CLRN1P58418 SCARNA4.1-201ENST00000628597 123 ntBASIC2.39□□□□□ -2.03
CLRN1P58418 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
CLRN1P58418 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
CLRN1P58418 RNA5SP493-201ENST00000364115 91 ntBASIC2.38□□□□□ -2.03
CLRN1P58418 RNU1-112P-201ENST00000364401 164 ntBASIC2.38□□□□□ -2.03
CLRN1P58418 RNU4-41P-201ENST00000364426 143 ntBASIC2.38□□□□□ -2.03
CLRN1P58418 RNU6-1164P-201ENST00000364428 107 ntBASIC2.38□□□□□ -2.03
CLRN1P58418 RNY1P5-201ENST00000383890 115 ntBASIC2.38□□□□□ -2.03
CLRN1P58418 SNORD116-18-201ENST00000383961 92 ntBASIC2.38□□□□□ -2.03
CLRN1P58418 RNU6-1228P-201ENST00000391014 107 ntBASIC2.38□□□□□ -2.03
CLRN1P58418 AL117342.1-201ENST00000404861 406 ntBASIC2.38□□□□□ -2.03
CLRN1P58418 MIR1278-201ENST00000408753 81 ntBASIC2.38□□□□□ -2.03
CLRN1P58418 RN7SKP284-201ENST00000411002 343 ntBASIC2.38□□□□□ -2.03
CLRN1P58418 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.38□□□□□ -2.03
CLRN1P58418 AL121914.1-201ENST00000450188 156 ntBASIC2.38□□□□□ -2.03
CLRN1P58418 AC005840.1-201ENST00000498412 377 ntBASIC2.38□□□□□ -2.03
CLRN1P58418 YWHAEP4-201ENST00000505390 198 ntBASIC2.38□□□□□ -2.03
CLRN1P58418 RNU6-561P-201ENST00000516222 102 ntBASIC2.38□□□□□ -2.03
CLRN1P58418 RNU7-99P-201ENST00000516271 62 ntBASIC2.38□□□□□ -2.03
CLRN1P58418 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.38□□□□□ -2.03
CLRN1P58418 AC011604.1-201ENST00000545978 196 ntBASIC2.38□□□□□ -2.03
CLRN1P58418 MIR4431-201ENST00000579990 94 ntBASIC2.38□□□□□ -2.03
CLRN1P58418 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.38□□□□□ -2.03
CLRN1P58418 AC245060.5-201ENST00000610778 3293 ntBASIC2.37□□□□□ -2.03
CLRN1P58418 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
CLRN1P58418 SNORA33-201ENST00000363664 130 ntBASIC2.37□□□□□ -2.03
CLRN1P58418 RNU1-91P-201ENST00000364746 163 ntBASIC2.37□□□□□ -2.03
CLRN1P58418 Y_RNA.580-201ENST00000391004 95 ntBASIC2.37□□□□□ -2.03
CLRN1P58418 RPS15AP28-201ENST00000435088 386 ntBASIC2.37□□□□□ -2.03
CLRN1P58418 AC105272.1-201ENST00000438604 198 ntBASIC2.37□□□□□ -2.03
CLRN1P58418 AC245102.2-201ENST00000448956 180 ntBASIC2.37□□□□□ -2.03
CLRN1P58418 RN7SL636P-201ENST00000497504 294 ntBASIC2.37□□□□□ -2.03
CLRN1P58418 RNU6-1096P-201ENST00000517089 102 ntBASIC2.37□□□□□ -2.03
CLRN1P58418 AL359075.3-201ENST00000613288 217 ntBASIC2.37□□□□□ -2.03
CLRN1P58418 U6.108-201ENST00000637764 58 ntBASIC2.37□□□□□ -2.03
CLRN1P58418 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.37□□□□□ -2.03
CLRN1P58418 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
CLRN1P58418 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.36□□□□□ -2.03
CLRN1P58418 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
CLRN1P58418 Y_RNA.203-201ENST00000364106 102 ntBASIC2.36□□□□□ -2.03
CLRN1P58418 RNU6-449P-201ENST00000383914 107 ntBASIC2.36□□□□□ -2.03
CLRN1P58418 RNU1-148P-201ENST00000384472 162 ntBASIC2.36□□□□□ -2.03
CLRN1P58418 RNA5SP496-201ENST00000391240 109 ntBASIC2.36□□□□□ -2.03
CLRN1P58418 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.36□□□□□ -2.03
CLRN1P58418 MIR3126-201ENST00000577443 74 ntBASIC2.36□□□□□ -2.03
CLRN1P58418 MIR3169-201ENST00000578032 83 ntBASIC2.36□□□□□ -2.03
CLRN1P58418 AC012640.5-201ENST00000623897 319 ntBASIC2.36□□□□□ -2.03
CLRN1P58418 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.36□□□□□ -2.03
CLRN1P58418 RNU6-862P-201ENST00000362804 105 ntBASIC2.35□□□□□ -2.03
CLRN1P58418 RNU6-23P-201ENST00000363283 107 ntBASIC2.35□□□□□ -2.03
CLRN1P58418 SNORA38-201ENST00000363946 132 ntBASIC2.35□□□□□ -2.03
CLRN1P58418 RNU6-728P-201ENST00000365375 104 ntBASIC2.35□□□□□ -2.03
CLRN1P58418 MIR15B-201ENST00000385045 98 ntBASIC2.35□□□□□ -2.03
CLRN1P58418 MIR520G-201ENST00000385064 90 ntBASIC2.35□□□□□ -2.03
CLRN1P58418 MIR9-1-201ENST00000385198 89 ntBASIC2.35□□□□□ -2.03
CLRN1P58418 RNU6-239P-201ENST00000390990 99 ntBASIC2.35□□□□□ -2.03
CLRN1P58418 RNA5SP210-201ENST00000391034 120 ntBASIC2.35□□□□□ -2.03
CLRN1P58418 AL512604.1-201ENST00000404812 257 ntBASIC2.35□□□□□ -2.03
CLRN1P58418 RN7SKP101-201ENST00000411376 320 ntBASIC2.35□□□□□ -2.03
CLRN1P58418 COTL1P1-201ENST00000422309 375 ntBASIC2.35□□□□□ -2.03
CLRN1P58418 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.35□□□□□ -2.03
CLRN1P58418 RPL39P40-201ENST00000445481 146 ntBASIC2.35□□□□□ -2.03
CLRN1P58418 RNU1-142P-201ENST00000516682 145 ntBASIC2.35□□□□□ -2.03
CLRN1P58418 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.35□□□□□ -2.03
CLRN1P58418 MIR4658-201ENST00000584344 65 ntBASIC2.35□□□□□ -2.03
CLRN1P58418 AC091178.2-201ENST00000584401 117 ntBASIC2.35□□□□□ -2.03
CLRN1P58418 ELOCP29-201ENST00000588193 334 ntBASIC2.35□□□□□ -2.03
CLRN1P58418 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.35□□□□□ -2.03
CLRN1P58418 MIR6733-201ENST00000635723 61 ntBASIC2.35□□□□□ -2.03
CLRN1P58418 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.35□□□□□ -2.03
CLRN1P58418 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.35□□□□□ -2.03
CLRN1P58418 AC100821.1-201ENST00000523153 2479 ntBASIC2.34□□□□□ -2.03
CLRN1P58418 SNORA8-201ENST00000384574 139 ntBASIC2.34□□□□□ -2.03
CLRN1P58418 RNA5SP323-201ENST00000391094 133 ntBASIC2.34□□□□□ -2.03
CLRN1P58418 Y_RNA.587-201ENST00000391210 103 ntBASIC2.34□□□□□ -2.03
CLRN1P58418 Y_RNA.622-201ENST00000411091 108 ntBASIC2.34□□□□□ -2.03
CLRN1P58418 AC006461.1-201ENST00000412637 326 ntBASIC2.34□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 276.3 ms