Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 AC245047.8-201ENST00000456455 284 ntBASIC2.76□□□□□ -1.97
COL6A2P12110 RNU1-131P-201ENST00000458943 161 ntBASIC2.76□□□□□ -1.97
COL6A2P12110 RPL23AP54-201ENST00000495129 419 ntBASIC2.76□□□□□ -1.97
COL6A2P12110 RNU7-172P-201ENST00000517125 64 ntBASIC2.76□□□□□ -1.97
COL6A2P12110 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.76□□□□□ -1.97
COL6A2P12110 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.76□□□□□ -1.97
COL6A2P12110 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
COL6A2P12110 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.75□□□□□ -1.97
COL6A2P12110 MIR422A-201ENST00000362286 90 ntBASIC2.75□□□□□ -1.97
COL6A2P12110 Y_RNA.99-201ENST00000363138 105 ntBASIC2.75□□□□□ -1.97
COL6A2P12110 RNU4-13P-201ENST00000364019 141 ntBASIC2.75□□□□□ -1.97
COL6A2P12110 SNORA19-201ENST00000384737 128 ntBASIC2.75□□□□□ -1.97
COL6A2P12110 MT-TT-201ENST00000387460 66 ntBASIC2.75□□□□□ -1.97
COL6A2P12110 AL606845.1-201ENST00000404881 255 ntBASIC2.75□□□□□ -1.97
COL6A2P12110 RN7SKP101-201ENST00000411376 320 ntBASIC2.75□□□□□ -1.97
COL6A2P12110 COTL1P1-201ENST00000422309 375 ntBASIC2.75□□□□□ -1.97
COL6A2P12110 AC063976.3-201ENST00000426849 329 ntBASIC2.75□□□□□ -1.97
COL6A2P12110 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.75□□□□□ -1.97
COL6A2P12110 RNU6-1007P-201ENST00000516586 107 ntBASIC2.75□□□□□ -1.97
COL6A2P12110 LARP7P3-201ENST00000579888 337 ntBASIC2.75□□□□□ -1.97
COL6A2P12110 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC2.75□□□□□ -1.97
COL6A2P12110 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
COL6A2P12110 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
COL6A2P12110 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.75□□□□□ -1.97
COL6A2P12110 SNORA38-201ENST00000363946 132 ntBASIC2.74□□□□□ -1.97
COL6A2P12110 MIR1253-201ENST00000408273 105 ntBASIC2.74□□□□□ -1.97
COL6A2P12110 RNU4-43P-201ENST00000410628 137 ntBASIC2.74□□□□□ -1.97
COL6A2P12110 EDDM3CP-201ENST00000415977 425 ntBASIC2.74□□□□□ -1.97
COL6A2P12110 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.74□□□□□ -1.97
COL6A2P12110 AC022018.1-201ENST00000430685 241 ntBASIC2.74□□□□□ -1.97
COL6A2P12110 AC107027.2-201ENST00000512197 115 ntBASIC2.74□□□□□ -1.97
COL6A2P12110 AC011406.1-201ENST00000512440 370 ntBASIC2.74□□□□□ -1.97
COL6A2P12110 EIF4BP1-201ENST00000554881 351 ntBASIC2.74□□□□□ -1.97
COL6A2P12110 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC2.74□□□□□ -1.97
COL6A2P12110 MIR5194-201ENST00000582634 120 ntBASIC2.74□□□□□ -1.97
COL6A2P12110 MIR3670-2-201ENST00000582974 65 ntBASIC2.74□□□□□ -1.97
COL6A2P12110 MIR3670-1-201ENST00000584160 65 ntBASIC2.74□□□□□ -1.97
COL6A2P12110 MIR3670-3-201ENST00000584855 65 ntBASIC2.74□□□□□ -1.97
COL6A2P12110 AP001485.1-201ENST00000604799 199 ntBASIC2.74□□□□□ -1.97
COL6A2P12110 AL353149.1-201ENST00000610667 244 ntBASIC2.74□□□□□ -1.97
COL6A2P12110 MIR3670-4-201ENST00000612260 65 ntBASIC2.74□□□□□ -1.97
COL6A2P12110 Y_RNA.778-201ENST00000620203 90 ntBASIC2.74□□□□□ -1.97
COL6A2P12110 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.73□□□□□ -1.97
COL6A2P12110 RNU6-728P-201ENST00000365375 104 ntBASIC2.73□□□□□ -1.97
COL6A2P12110 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.73□□□□□ -1.97
COL6A2P12110 AL512604.1-201ENST00000404812 257 ntBASIC2.73□□□□□ -1.97
COL6A2P12110 HMGN2P34-201ENST00000437647 269 ntBASIC2.73□□□□□ -1.97
COL6A2P12110 AC009238.1-201ENST00000442165 424 ntBASIC2.73□□□□□ -1.97
COL6A2P12110 AC009237.6-201ENST00000446969 424 ntBASIC2.73□□□□□ -1.97
COL6A2P12110 AC245102.2-201ENST00000448956 180 ntBASIC2.73□□□□□ -1.97
COL6A2P12110 AL121914.1-201ENST00000450188 156 ntBASIC2.73□□□□□ -1.97
COL6A2P12110 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.73□□□□□ -1.97
COL6A2P12110 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC2.73□□□□□ -1.97
COL6A2P12110 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.73□□□□□ -1.97
COL6A2P12110 AL021707.8-201ENST00000609428 183 ntBASIC2.73□□□□□ -1.97
COL6A2P12110 FO624990.1-201ENST00000636373 85 ntBASIC2.73□□□□□ -1.97
COL6A2P12110 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.73□□□□□ -1.97
COL6A2P12110 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.73□□□□□ -1.97
COL6A2P12110 snoU2-30.2-201ENST00000362805 70 ntBASIC2.72□□□□□ -1.97
COL6A2P12110 RNU6-81P-201ENST00000365608 104 ntBASIC2.72□□□□□ -1.97
COL6A2P12110 RN7SKP284-201ENST00000411002 343 ntBASIC2.72□□□□□ -1.97
COL6A2P12110 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC2.72□□□□□ -1.97
COL6A2P12110 RPS4XP11-201ENST00000446897 772 ntBASIC2.72□□□□□ -1.97
COL6A2P12110 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.72□□□□□ -1.97
COL6A2P12110 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.72□□□□□ -1.97
COL6A2P12110 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
COL6A2P12110 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
COL6A2P12110 Y_RNA.215-201ENST00000364204 112 ntBASIC2.71□□□□□ -1.98
COL6A2P12110 Y_RNA.337-201ENST00000365312 102 ntBASIC2.71□□□□□ -1.98
COL6A2P12110 RNU2-55P-201ENST00000411146 174 ntBASIC2.71□□□□□ -1.98
COL6A2P12110 S100A11P2-201ENST00000467589 312 ntBASIC2.71□□□□□ -1.98
COL6A2P12110 RNU7-99P-201ENST00000516271 62 ntBASIC2.71□□□□□ -1.98
COL6A2P12110 MIR2681-201ENST00000581814 105 ntBASIC2.71□□□□□ -1.98
COL6A2P12110 AC006386.2-201ENST00000624491 75 ntBASIC2.71□□□□□ -1.98
COL6A2P12110 AC012005.1-201ENST00000624575 75 ntBASIC2.71□□□□□ -1.98
COL6A2P12110 MIR338-201ENST00000636369 67 ntBASIC2.71□□□□□ -1.98
COL6A2P12110 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.98
COL6A2P12110 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
COL6A2P12110 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.7□□□□□ -1.98
COL6A2P12110 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
COL6A2P12110 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
COL6A2P12110 SNORD114-6-201ENST00000364393 72 ntBASIC2.7□□□□□ -1.98
COL6A2P12110 Y_RNA.343-201ENST00000365354 112 ntBASIC2.7□□□□□ -1.98
COL6A2P12110 Y_RNA.488-201ENST00000384403 102 ntBASIC2.7□□□□□ -1.98
COL6A2P12110 RNU6-136P-201ENST00000384663 107 ntBASIC2.7□□□□□ -1.98
COL6A2P12110 MIR15B-201ENST00000385045 98 ntBASIC2.7□□□□□ -1.98
COL6A2P12110 RNU11-5P-201ENST00000391216 129 ntBASIC2.7□□□□□ -1.98
COL6A2P12110 AC104389.3-201ENST00000445629 235 ntBASIC2.7□□□□□ -1.98
COL6A2P12110 RPS29P21-201ENST00000496272 170 ntBASIC2.7□□□□□ -1.98
COL6A2P12110 RN7SL636P-201ENST00000497504 294 ntBASIC2.7□□□□□ -1.98
COL6A2P12110 RNU6-561P-201ENST00000516222 102 ntBASIC2.7□□□□□ -1.98
COL6A2P12110 AC007229.1-201ENST00000590455 412 ntBASIC2.7□□□□□ -1.98
COL6A2P12110 DNAJC19P2-201ENST00000593340 302 ntBASIC2.7□□□□□ -1.98
COL6A2P12110 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.7□□□□□ -1.98
COL6A2P12110 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
COL6A2P12110 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
COL6A2P12110 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
COL6A2P12110 Y_RNA.203-201ENST00000364106 102 ntBASIC2.69□□□□□ -1.98
COL6A2P12110 RNU6-151P-201ENST00000364158 107 ntBASIC2.69□□□□□ -1.98
COL6A2P12110 RNU4-41P-201ENST00000364426 143 ntBASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms