Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 RNU6-117P-201ENST00000365415 107 ntBASIC2.88□□□□□ -1.95
TRIM13O60858 CD24P4-201ENST00000382840 243 ntBASIC2.88□□□□□ -1.95
TRIM13O60858 RNU6-1113P-201ENST00000384348 107 ntBASIC2.88□□□□□ -1.95
TRIM13O60858 MIR200C-201ENST00000384980 68 ntBASIC2.88□□□□□ -1.95
TRIM13O60858 RNU6-440P-201ENST00000390882 105 ntBASIC2.88□□□□□ -1.95
TRIM13O60858 PTMAP2-201ENST00000397627 327 ntBASIC2.88□□□□□ -1.95
TRIM13O60858 AL590004.2-201ENST00000404787 371 ntBASIC2.88□□□□□ -1.95
TRIM13O60858 RNA5SP511-201ENST00000410487 115 ntBASIC2.88□□□□□ -1.95
TRIM13O60858 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.88□□□□□ -1.95
TRIM13O60858 RNU7-57P-201ENST00000459540 60 ntBASIC2.88□□□□□ -1.95
TRIM13O60858 COX6CP6-201ENST00000490840 228 ntBASIC2.88□□□□□ -1.95
TRIM13O60858 MRPS36P2-201ENST00000512569 299 ntBASIC2.88□□□□□ -1.95
TRIM13O60858 RN7SKP12-201ENST00000516275 143 ntBASIC2.88□□□□□ -1.95
TRIM13O60858 Y_RNA.685-201ENST00000516532 108 ntBASIC2.88□□□□□ -1.95
TRIM13O60858 RNU6-1098P-201ENST00000516772 96 ntBASIC2.88□□□□□ -1.95
TRIM13O60858 SCARNA11.3-201ENST00000517276 130 ntBASIC2.88□□□□□ -1.95
TRIM13O60858 MIR2681-201ENST00000581814 105 ntBASIC2.88□□□□□ -1.95
TRIM13O60858 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC2.88□□□□□ -1.95
TRIM13O60858 AP003122.5-201ENST00000527668 3766 ntBASIC2.87□□□□□ -1.95
TRIM13O60858 Y_RNA.111-201ENST00000363248 100 ntBASIC2.87□□□□□ -1.95
TRIM13O60858 Y_RNA.203-201ENST00000364106 102 ntBASIC2.87□□□□□ -1.95
TRIM13O60858 SNORD32B-201ENST00000364460 84 ntBASIC2.87□□□□□ -1.95
TRIM13O60858 RNU6-1138P-201ENST00000365359 106 ntBASIC2.87□□□□□ -1.95
TRIM13O60858 MIR181A2-201ENST00000384863 110 ntBASIC2.87□□□□□ -1.95
TRIM13O60858 MIR562-201ENST00000384894 95 ntBASIC2.87□□□□□ -1.95
TRIM13O60858 MIR1283-1-201ENST00000408494 87 ntBASIC2.87□□□□□ -1.95
TRIM13O60858 RPS3AP1-201ENST00000413190 320 ntBASIC2.87□□□□□ -1.95
TRIM13O60858 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC2.87□□□□□ -1.95
TRIM13O60858 AC245102.2-201ENST00000448956 180 ntBASIC2.87□□□□□ -1.95
TRIM13O60858 AC023449.1-201ENST00000454464 154 ntBASIC2.87□□□□□ -1.95
TRIM13O60858 RNU6-221P-201ENST00000459541 99 ntBASIC2.87□□□□□ -1.95
TRIM13O60858 RPL27AP5-201ENST00000469428 449 ntBASIC2.87□□□□□ -1.95
TRIM13O60858 RNU6-126P-201ENST00000516685 103 ntBASIC2.87□□□□□ -1.95
TRIM13O60858 RNU6-365P-201ENST00000517113 106 ntBASIC2.87□□□□□ -1.95
TRIM13O60858 MIR5680-201ENST00000577577 84 ntBASIC2.87□□□□□ -1.95
TRIM13O60858 MIR4662B-201ENST00000579498 81 ntBASIC2.87□□□□□ -1.95
TRIM13O60858 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
TRIM13O60858 Y_RNA.49-201ENST00000362714 112 ntBASIC2.86□□□□□ -1.95
TRIM13O60858 RNU6-486P-201ENST00000363116 107 ntBASIC2.86□□□□□ -1.95
TRIM13O60858 RNU4-13P-201ENST00000364019 141 ntBASIC2.86□□□□□ -1.95
TRIM13O60858 RNU6-573P-201ENST00000383938 106 ntBASIC2.86□□□□□ -1.95
TRIM13O60858 MIR512-1-201ENST00000384913 84 ntBASIC2.86□□□□□ -1.95
TRIM13O60858 RN7SKP220-201ENST00000410611 288 ntBASIC2.86□□□□□ -1.95
TRIM13O60858 RNU2-32P-201ENST00000411193 191 ntBASIC2.86□□□□□ -1.95
TRIM13O60858 RNU6-113P-201ENST00000516653 101 ntBASIC2.86□□□□□ -1.95
TRIM13O60858 RNU7-149P-201ENST00000516739 59 ntBASIC2.86□□□□□ -1.95
TRIM13O60858 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.86□□□□□ -1.95
TRIM13O60858 AC103810.1-201ENST00000579873 453 ntBASIC2.86□□□□□ -1.95
TRIM13O60858 Pinc.1-201ENST00000616452 154 ntBASIC2.86□□□□□ -1.95
TRIM13O60858 AC002064.3-201ENST00000623448 346 ntBASIC2.86□□□□□ -1.95
TRIM13O60858 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.86□□□□□ -1.95
TRIM13O60858 AL355596.1-201ENST00000565399 3996 ntBASIC2.86□□□□□ -1.95
TRIM13O60858 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.86□□□□□ -1.95
TRIM13O60858 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
TRIM13O60858 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.85□□□□□ -1.95
TRIM13O60858 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.85□□□□□ -1.95
TRIM13O60858 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
TRIM13O60858 Y_RNA.796-201ENST00000364268 102 ntBASIC2.85□□□□□ -1.95
TRIM13O60858 Y_RNA.799-201ENST00000364992 102 ntBASIC2.85□□□□□ -1.95
TRIM13O60858 U8.9-201ENST00000365667 134 ntBASIC2.85□□□□□ -1.95
TRIM13O60858 SNORA54-201ENST00000384281 123 ntBASIC2.85□□□□□ -1.95
TRIM13O60858 SNORD14D-201ENST00000384390 87 ntBASIC2.85□□□□□ -1.95
TRIM13O60858 Y_RNA.486-201ENST00000384398 107 ntBASIC2.85□□□□□ -1.95
TRIM13O60858 RNY1P7-201ENST00000384743 110 ntBASIC2.85□□□□□ -1.95
TRIM13O60858 MIR300-201ENST00000401138 83 ntBASIC2.85□□□□□ -1.95
TRIM13O60858 EIF4EP4-201ENST00000424916 578 ntBASIC2.85□□□□□ -1.95
TRIM13O60858 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC2.85□□□□□ -1.95
TRIM13O60858 AC080013.2-201ENST00000460866 323 ntBASIC2.85□□□□□ -1.95
TRIM13O60858 SCARNA17.1-201ENST00000516211 143 ntBASIC2.85□□□□□ -1.95
TRIM13O60858 SCARNA17.2-201ENST00000516334 143 ntBASIC2.85□□□□□ -1.95
TRIM13O60858 RNU5F-4P-201ENST00000516581 114 ntBASIC2.85□□□□□ -1.95
TRIM13O60858 AC027419.1-201ENST00000522976 328 ntBASIC2.85□□□□□ -1.95
TRIM13O60858 SCARNA17.4-201ENST00000614296 143 ntBASIC2.85□□□□□ -1.95
TRIM13O60858 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2.85□□□□□ -1.95
TRIM13O60858 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
TRIM13O60858 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.85□□□□□ -1.95
TRIM13O60858 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.85□□□□□ -1.95
TRIM13O60858 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
TRIM13O60858 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.84□□□□□ -1.95
TRIM13O60858 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
TRIM13O60858 SNORA63.1-201ENST00000362493 131 ntBASIC2.84□□□□□ -1.95
TRIM13O60858 RNU6-1209P-201ENST00000363655 107 ntBASIC2.84□□□□□ -1.95
TRIM13O60858 Y_RNA.220-201ENST00000364244 109 ntBASIC2.84□□□□□ -1.95
TRIM13O60858 SNORA9.2-201ENST00000365361 133 ntBASIC2.84□□□□□ -1.95
TRIM13O60858 MIR29B2-201ENST00000385055 81 ntBASIC2.84□□□□□ -1.95
TRIM13O60858 RNU6-592P-201ENST00000411333 103 ntBASIC2.84□□□□□ -1.95
TRIM13O60858 AC005326.1-201ENST00000429197 123 ntBASIC2.84□□□□□ -1.95
TRIM13O60858 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.84□□□□□ -1.95
TRIM13O60858 OR9P1P-201ENST00000496431 281 ntBASIC2.84□□□□□ -1.95
TRIM13O60858 RNU6-158P-201ENST00000517104 100 ntBASIC2.84□□□□□ -1.95
TRIM13O60858 snoMBII-202.2-201ENST00000517263 86 ntBASIC2.84□□□□□ -1.95
TRIM13O60858 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.84□□□□□ -1.95
TRIM13O60858 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC2.84□□□□□ -1.95
TRIM13O60858 MIR6798-201ENST00000612887 67 ntBASIC2.84□□□□□ -1.95
TRIM13O60858 AC006435.5-201ENST00000624486 112 ntBASIC2.84□□□□□ -1.95
TRIM13O60858 MIR6733-201ENST00000635723 61 ntBASIC2.84□□□□□ -1.95
TRIM13O60858 U6.105-201ENST00000637379 88 ntBASIC2.84□□□□□ -1.95
TRIM13O60858 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.84□□□□□ -1.96
TRIM13O60858 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
TRIM13O60858 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 216.2 ms