Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.88□□□□□ -1.79
RCCD1A6NED2 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.88□□□□□ -1.79
RCCD1A6NED2 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
RCCD1A6NED2 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
RCCD1A6NED2 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
RCCD1A6NED2 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
RCCD1A6NED2 Y_RNA.155-201ENST00000363632 101 ntBASIC3.87□□□□□ -1.79
RCCD1A6NED2 SNORA4.2-201ENST00000365313 147 ntBASIC3.87□□□□□ -1.79
RCCD1A6NED2 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
RCCD1A6NED2 AC006989.1-201ENST00000427212 131 ntBASIC3.87□□□□□ -1.79
RCCD1A6NED2 AL117339.2-201ENST00000430475 180 ntBASIC3.87□□□□□ -1.79
RCCD1A6NED2 AL035398.1-201ENST00000430869 322 ntBASIC3.87□□□□□ -1.79
RCCD1A6NED2 AL109933.2-201ENST00000452651 260 ntBASIC3.87□□□□□ -1.79
RCCD1A6NED2 RN7SL323P-201ENST00000494712 295 ntBASIC3.87□□□□□ -1.79
RCCD1A6NED2 AL163195.1-201ENST00000496941 348 ntBASIC3.87□□□□□ -1.79
RCCD1A6NED2 AC110768.1-201ENST00000509222 400 ntBASIC3.87□□□□□ -1.79
RCCD1A6NED2 MIR3618-201ENST00000580330 88 ntBASIC3.87□□□□□ -1.79
RCCD1A6NED2 AC002984.1-201ENST00000591692 448 ntBASIC3.87□□□□□ -1.79
RCCD1A6NED2 AL355297.2-201ENST00000604792 129 ntBASIC3.87□□□□□ -1.79
RCCD1A6NED2 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
RCCD1A6NED2 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.87□□□□□ -1.79
RCCD1A6NED2 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
RCCD1A6NED2 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
RCCD1A6NED2 RNU6-363P-201ENST00000362895 105 ntBASIC3.86□□□□□ -1.79
RCCD1A6NED2 SNORD115-19-201ENST00000363098 82 ntBASIC3.86□□□□□ -1.79
RCCD1A6NED2 SNORD115-18-201ENST00000363293 82 ntBASIC3.86□□□□□ -1.79
RCCD1A6NED2 SNORD115-17-201ENST00000364612 82 ntBASIC3.86□□□□□ -1.79
RCCD1A6NED2 RNU6-242P-201ENST00000384359 107 ntBASIC3.86□□□□□ -1.79
RCCD1A6NED2 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
RCCD1A6NED2 RNA5SP482-201ENST00000391269 118 ntBASIC3.86□□□□□ -1.79
RCCD1A6NED2 RN7SKP200-201ENST00000410564 320 ntBASIC3.86□□□□□ -1.79
RCCD1A6NED2 RNU6-733P-201ENST00000410759 104 ntBASIC3.86□□□□□ -1.79
RCCD1A6NED2 RNA5SP225-201ENST00000410874 135 ntBASIC3.86□□□□□ -1.79
RCCD1A6NED2 CST2P1-201ENST00000425770 87 ntBASIC3.86□□□□□ -1.79
RCCD1A6NED2 RPL39P39-201ENST00000455840 151 ntBASIC3.86□□□□□ -1.79
RCCD1A6NED2 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC3.86□□□□□ -1.79
RCCD1A6NED2 RNU2-13P-201ENST00000515909 113 ntBASIC3.86□□□□□ -1.79
RCCD1A6NED2 RNA5SP164-201ENST00000516533 110 ntBASIC3.86□□□□□ -1.79
RCCD1A6NED2 AC022254.1-201ENST00000567857 235 ntBASIC3.86□□□□□ -1.79
RCCD1A6NED2 MIR4286-201ENST00000580651 93 ntBASIC3.86□□□□□ -1.79
RCCD1A6NED2 AC012531.5-201ENST00000611375 151 ntBASIC3.86□□□□□ -1.79
RCCD1A6NED2 AC022149.2-201ENST00000621061 203 ntBASIC3.86□□□□□ -1.79
RCCD1A6NED2 AP000553.6-201ENST00000641242 118 ntBASIC3.86□□□□□ -1.79
RCCD1A6NED2 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
RCCD1A6NED2 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.86□□□□□ -1.79
RCCD1A6NED2 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
RCCD1A6NED2 MIR342-201ENST00000362212 99 ntBASIC3.85□□□□□ -1.79
RCCD1A6NED2 RNU6-832P-201ENST00000363319 107 ntBASIC3.85□□□□□ -1.79
RCCD1A6NED2 RNA5SP283-201ENST00000365604 119 ntBASIC3.85□□□□□ -1.79
RCCD1A6NED2 RNU6-409P-201ENST00000384114 104 ntBASIC3.85□□□□□ -1.79
RCCD1A6NED2 PTMAP2-201ENST00000397627 327 ntBASIC3.85□□□□□ -1.79
RCCD1A6NED2 RNA5SP144-201ENST00000410846 116 ntBASIC3.85□□□□□ -1.79
RCCD1A6NED2 AL022718.1-201ENST00000412004 84 ntBASIC3.85□□□□□ -1.79
RCCD1A6NED2 SRIP3-201ENST00000413200 219 ntBASIC3.85□□□□□ -1.79
RCCD1A6NED2 SNX2P2-201ENST00000424553 323 ntBASIC3.85□□□□□ -1.79
RCCD1A6NED2 AC004941.2-201ENST00000427009 228 ntBASIC3.85□□□□□ -1.79
RCCD1A6NED2 RPS23P4-201ENST00000487908 423 ntBASIC3.85□□□□□ -1.79
RCCD1A6NED2 AC023141.11-201ENST00000508864 202 ntBASIC3.85□□□□□ -1.79
RCCD1A6NED2 RNU6-667P-201ENST00000517186 102 ntBASIC3.85□□□□□ -1.79
RCCD1A6NED2 AC087499.8-201ENST00000578406 226 ntBASIC3.85□□□□□ -1.79
RCCD1A6NED2 U7.3-201ENST00000616123 62 ntBASIC3.85□□□□□ -1.79
RCCD1A6NED2 MIR203B-201ENST00000636080 86 ntBASIC3.85□□□□□ -1.79
RCCD1A6NED2 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.84□□□□□ -1.79
RCCD1A6NED2 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
RCCD1A6NED2 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.84□□□□□ -1.79
RCCD1A6NED2 RNU6-170P-201ENST00000362832 104 ntBASIC3.84□□□□□ -1.79
RCCD1A6NED2 MIR592-201ENST00000384959 97 ntBASIC3.84□□□□□ -1.79
RCCD1A6NED2 MIR577-201ENST00000385196 96 ntBASIC3.84□□□□□ -1.79
RCCD1A6NED2 RNU6-644P-201ENST00000391155 98 ntBASIC3.84□□□□□ -1.79
RCCD1A6NED2 MIR1255A-201ENST00000408338 113 ntBASIC3.84□□□□□ -1.79
RCCD1A6NED2 SNORA3.3-201ENST00000408712 125 ntBASIC3.84□□□□□ -1.79
RCCD1A6NED2 RNA5SP395-201ENST00000516567 118 ntBASIC3.84□□□□□ -1.79
RCCD1A6NED2 RNU7-28P-201ENST00000516759 62 ntBASIC3.84□□□□□ -1.79
RCCD1A6NED2 MIR2276-201ENST00000516886 89 ntBASIC3.84□□□□□ -1.79
RCCD1A6NED2 AC026333.2-201ENST00000542164 106 ntBASIC3.84□□□□□ -1.79
RCCD1A6NED2 AC244505.7-201ENST00000599675 272 ntBASIC3.84□□□□□ -1.79
RCCD1A6NED2 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
RCCD1A6NED2 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
RCCD1A6NED2 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.83□□□□□ -1.8
RCCD1A6NED2 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
RCCD1A6NED2 SNORA68.1-201ENST00000364537 132 ntBASIC3.83□□□□□ -1.8
RCCD1A6NED2 Y_RNA.360-201ENST00000365512 102 ntBASIC3.83□□□□□ -1.8
RCCD1A6NED2 RNU6-813P-201ENST00000384691 107 ntBASIC3.83□□□□□ -1.8
RCCD1A6NED2 MIR30B-201ENST00000384850 88 ntBASIC3.83□□□□□ -1.8
RCCD1A6NED2 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.83□□□□□ -1.8
RCCD1A6NED2 RNU6-795P-201ENST00000516323 103 ntBASIC3.83□□□□□ -1.8
RCCD1A6NED2 RNU6-579P-201ENST00000516879 102 ntBASIC3.83□□□□□ -1.8
RCCD1A6NED2 AC004812.1-201ENST00000540773 146 ntBASIC3.83□□□□□ -1.8
RCCD1A6NED2 AL606490.9-201ENST00000603331 271 ntBASIC3.83□□□□□ -1.8
RCCD1A6NED2 AC110741.2-201ENST00000605278 268 ntBASIC3.83□□□□□ -1.8
RCCD1A6NED2 AC012531.4-201ENST00000616509 177 ntBASIC3.83□□□□□ -1.8
RCCD1A6NED2 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC3.83□□□□□ -1.8
RCCD1A6NED2 FAS-AS1.2-201ENST00000620386 170 ntBASIC3.83□□□□□ -1.8
RCCD1A6NED2 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
RCCD1A6NED2 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.83□□□□□ -1.8
RCCD1A6NED2 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
RCCD1A6NED2 MAPK10-322ENST00000641485 4530 ntBASIC3.83□□□□□ -1.8
RCCD1A6NED2 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
RCCD1A6NED2 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
RCCD1A6NED2 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 113.1 ms