Protein–RNA interactions for Protein: Q9Y3Q4

HCN4, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN4Q9Y3Q4 RPS12P18-201ENST00000442381 270 ntBASIC3.61□□□□□ -1.83
HCN4Q9Y3Q4 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.61□□□□□ -1.83
HCN4Q9Y3Q4 snoU13.26-201ENST00000459452 105 ntBASIC3.61□□□□□ -1.83
HCN4Q9Y3Q4 SNORD33.1-201ENST00000516213 88 ntBASIC3.61□□□□□ -1.83
HCN4Q9Y3Q4 NDUFA5P6-201ENST00000542110 379 ntBASIC3.61□□□□□ -1.83
HCN4Q9Y3Q4 AP000553.6-201ENST00000641242 118 ntBASIC3.61□□□□□ -1.83
HCN4Q9Y3Q4 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
HCN4Q9Y3Q4 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC3.61□□□□□ -1.83
HCN4Q9Y3Q4 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.61□□□□□ -1.83
HCN4Q9Y3Q4 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.61□□□□□ -1.83
HCN4Q9Y3Q4 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
HCN4Q9Y3Q4 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
HCN4Q9Y3Q4 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
HCN4Q9Y3Q4 RNU6-546P-201ENST00000383991 107 ntBASIC3.6□□□□□ -1.83
HCN4Q9Y3Q4 SNORA70B-201ENST00000384210 135 ntBASIC3.6□□□□□ -1.83
HCN4Q9Y3Q4 MIRLET7F2-201ENST00000385277 83 ntBASIC3.6□□□□□ -1.83
HCN4Q9Y3Q4 SNORD17-201ENST00000390930 237 ntBASIC3.6□□□□□ -1.83
HCN4Q9Y3Q4 MIR891A-201ENST00000401237 79 ntBASIC3.6□□□□□ -1.83
HCN4Q9Y3Q4 RPS29P21-201ENST00000496272 170 ntBASIC3.6□□□□□ -1.83
HCN4Q9Y3Q4 RNA5SP490-201ENST00000517141 136 ntBASIC3.6□□□□□ -1.83
HCN4Q9Y3Q4 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC3.6□□□□□ -1.83
HCN4Q9Y3Q4 AL365205.2-201ENST00000594586 68 ntBASIC3.6□□□□□ -1.83
HCN4Q9Y3Q4 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.6□□□□□ -1.83
HCN4Q9Y3Q4 U6.73-201ENST00000619194 103 ntBASIC3.6□□□□□ -1.83
HCN4Q9Y3Q4 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC3.6□□□□□ -1.83
HCN4Q9Y3Q4 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
HCN4Q9Y3Q4 MIR7157-201ENST00000635801 60 ntBASIC3.6□□□□□ -1.83
HCN4Q9Y3Q4 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
HCN4Q9Y3Q4 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
HCN4Q9Y3Q4 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
HCN4Q9Y3Q4 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.6□□□□□ -1.83
HCN4Q9Y3Q4 Y_RNA.309-201ENST00000365046 111 ntBASIC3.59□□□□□ -1.83
HCN4Q9Y3Q4 Y_RNA.486-201ENST00000384398 107 ntBASIC3.59□□□□□ -1.83
HCN4Q9Y3Q4 SNORD116-21-201ENST00000384507 92 ntBASIC3.59□□□□□ -1.83
HCN4Q9Y3Q4 MIR548A3-201ENST00000385297 97 ntBASIC3.59□□□□□ -1.83
HCN4Q9Y3Q4 RNU6-1328P-201ENST00000410938 106 ntBASIC3.59□□□□□ -1.83
HCN4Q9Y3Q4 RNA5SP127-201ENST00000411051 133 ntBASIC3.59□□□□□ -1.83
HCN4Q9Y3Q4 TRBV12-2-201ENST00000489763 344 ntBASIC3.59□□□□□ -1.83
HCN4Q9Y3Q4 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC3.59□□□□□ -1.83
HCN4Q9Y3Q4 SNORA18.4-201ENST00000516440 124 ntBASIC3.59□□□□□ -1.83
HCN4Q9Y3Q4 SNORA70.18-201ENST00000516696 98 ntBASIC3.59□□□□□ -1.83
HCN4Q9Y3Q4 RNU6-965P-201ENST00000516721 96 ntBASIC3.59□□□□□ -1.83
HCN4Q9Y3Q4 SCARNA3-201ENST00000517097 143 ntBASIC3.59□□□□□ -1.83
HCN4Q9Y3Q4 RNU1-104P-201ENST00000517280 175 ntBASIC3.59□□□□□ -1.83
HCN4Q9Y3Q4 AC004832.5-201ENST00000608677 401 ntBASIC3.59□□□□□ -1.83
HCN4Q9Y3Q4 AC107294.3-201ENST00000609211 526 ntBASIC3.59□□□□□ -1.83
HCN4Q9Y3Q4 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC3.59□□□□□ -1.83
HCN4Q9Y3Q4 U2.20-201ENST00000613956 192 ntBASIC3.59□□□□□ -1.83
HCN4Q9Y3Q4 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.59□□□□□ -1.84
HCN4Q9Y3Q4 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
HCN4Q9Y3Q4 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
HCN4Q9Y3Q4 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
HCN4Q9Y3Q4 AP006437.1-201ENST00000641440 3685 ntBASIC3.58□□□□□ -1.84
HCN4Q9Y3Q4 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
HCN4Q9Y3Q4 AC093259.1-201ENST00000509755 300 ntBASIC3.58□□□□□ -1.84
HCN4Q9Y3Q4 RN7SKP19-201ENST00000516016 252 ntBASIC3.58□□□□□ -1.84
HCN4Q9Y3Q4 RN7SKP209-201ENST00000516888 304 ntBASIC3.58□□□□□ -1.84
HCN4Q9Y3Q4 RNU6-365P-201ENST00000517113 106 ntBASIC3.58□□□□□ -1.84
HCN4Q9Y3Q4 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
HCN4Q9Y3Q4 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.58□□□□□ -1.84
HCN4Q9Y3Q4 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.58□□□□□ -1.84
HCN4Q9Y3Q4 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
HCN4Q9Y3Q4 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
HCN4Q9Y3Q4 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.58□□□□□ -1.84
HCN4Q9Y3Q4 MAPK10-362ENST00000641864 4484 ntBASIC3.58□□□□□ -1.84
HCN4Q9Y3Q4 AC080128.1-201ENST00000474389 1917 ntBASIC3.58□□□□□ -1.84
HCN4Q9Y3Q4 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
HCN4Q9Y3Q4 Y_RNA.52-201ENST00000362760 96 ntBASIC3.57□□□□□ -1.84
HCN4Q9Y3Q4 Y_RNA.66-201ENST00000362862 102 ntBASIC3.57□□□□□ -1.84
HCN4Q9Y3Q4 RNU6-1255P-201ENST00000363434 112 ntBASIC3.57□□□□□ -1.84
HCN4Q9Y3Q4 RNU1-96P-201ENST00000364163 162 ntBASIC3.57□□□□□ -1.84
HCN4Q9Y3Q4 Y_RNA.332-201ENST00000365271 113 ntBASIC3.57□□□□□ -1.84
HCN4Q9Y3Q4 Y_RNA.346-201ENST00000365385 112 ntBASIC3.57□□□□□ -1.84
HCN4Q9Y3Q4 MIR95-201ENST00000385072 81 ntBASIC3.57□□□□□ -1.84
HCN4Q9Y3Q4 RNU2-32P-201ENST00000411193 191 ntBASIC3.57□□□□□ -1.84
HCN4Q9Y3Q4 AC123900.1-201ENST00000420390 96 ntBASIC3.57□□□□□ -1.84
HCN4Q9Y3Q4 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
HCN4Q9Y3Q4 SNORA4.4-201ENST00000515921 135 ntBASIC3.57□□□□□ -1.84
HCN4Q9Y3Q4 PRELID2P1-201ENST00000552837 301 ntBASIC3.57□□□□□ -1.84
HCN4Q9Y3Q4 MIR5739-201ENST00000619803 80 ntBASIC3.57□□□□□ -1.84
HCN4Q9Y3Q4 AC002064.3-201ENST00000623448 346 ntBASIC3.57□□□□□ -1.84
HCN4Q9Y3Q4 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
HCN4Q9Y3Q4 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
HCN4Q9Y3Q4 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
HCN4Q9Y3Q4 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
HCN4Q9Y3Q4 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.56□□□□□ -1.84
HCN4Q9Y3Q4 RNU6-1164P-201ENST00000364428 107 ntBASIC3.56□□□□□ -1.84
HCN4Q9Y3Q4 CD24P4-201ENST00000382840 243 ntBASIC3.56□□□□□ -1.84
HCN4Q9Y3Q4 MIR520G-201ENST00000385064 90 ntBASIC3.56□□□□□ -1.84
HCN4Q9Y3Q4 RNU6ATAC3P-201ENST00000387974 126 ntBASIC3.56□□□□□ -1.84
HCN4Q9Y3Q4 RNA5SP424-201ENST00000390988 115 ntBASIC3.56□□□□□ -1.84
HCN4Q9Y3Q4 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC3.56□□□□□ -1.84
HCN4Q9Y3Q4 AC018634.1-201ENST00000437554 401 ntBASIC3.56□□□□□ -1.84
HCN4Q9Y3Q4 MTATP6P21-201ENST00000440681 189 ntBASIC3.56□□□□□ -1.84
HCN4Q9Y3Q4 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC3.56□□□□□ -1.84
HCN4Q9Y3Q4 RNU6-504P-201ENST00000516568 104 ntBASIC3.56□□□□□ -1.84
HCN4Q9Y3Q4 RNU6-856P-201ENST00000516959 98 ntBASIC3.56□□□□□ -1.84
HCN4Q9Y3Q4 GTF3AP2-201ENST00000557014 266 ntBASIC3.56□□□□□ -1.84
HCN4Q9Y3Q4 JPX_2.1-201ENST00000614161 69 ntBASIC3.56□□□□□ -1.84
HCN4Q9Y3Q4 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms