Protein–RNA interactions for Protein: Q9HBF4

ZFYVE1, Zinc finger FYVE domain-containing protein 1, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE1Q9HBF4 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.25□□□□□ -1.89
ZFYVE1Q9HBF4 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
ZFYVE1Q9HBF4 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.24□□□□□ -1.89
ZFYVE1Q9HBF4 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.24□□□□□ -1.89
ZFYVE1Q9HBF4 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.24□□□□□ -1.89
ZFYVE1Q9HBF4 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
ZFYVE1Q9HBF4 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.24□□□□□ -1.89
ZFYVE1Q9HBF4 Y_RNA.111-201ENST00000363248 100 ntBASIC3.24□□□□□ -1.89
ZFYVE1Q9HBF4 Y_RNA.120-201ENST00000363304 110 ntBASIC3.24□□□□□ -1.89
ZFYVE1Q9HBF4 RNA5SP125-201ENST00000364843 120 ntBASIC3.24□□□□□ -1.89
ZFYVE1Q9HBF4 MIR95-201ENST00000385072 81 ntBASIC3.24□□□□□ -1.89
ZFYVE1Q9HBF4 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC3.24□□□□□ -1.89
ZFYVE1Q9HBF4 AC006539.3-201ENST00000454258 129 ntBASIC3.24□□□□□ -1.89
ZFYVE1Q9HBF4 AC023449.1-201ENST00000454464 154 ntBASIC3.24□□□□□ -1.89
ZFYVE1Q9HBF4 AP001486.1-201ENST00000463339 476 ntBASIC3.24□□□□□ -1.89
ZFYVE1Q9HBF4 RNU6-589P-201ENST00000516485 107 ntBASIC3.24□□□□□ -1.89
ZFYVE1Q9HBF4 U6.73-201ENST00000619194 103 ntBASIC3.24□□□□□ -1.89
ZFYVE1Q9HBF4 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
ZFYVE1Q9HBF4 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC3.24□□□□□ -1.89
ZFYVE1Q9HBF4 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
ZFYVE1Q9HBF4 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
ZFYVE1Q9HBF4 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.23□□□□□ -1.89
ZFYVE1Q9HBF4 AP003122.5-201ENST00000527668 3766 ntBASIC3.23□□□□□ -1.89
ZFYVE1Q9HBF4 RNU6-1164P-201ENST00000364428 107 ntBASIC3.23□□□□□ -1.89
ZFYVE1Q9HBF4 SNORD18B-201ENST00000365659 72 ntBASIC3.23□□□□□ -1.89
ZFYVE1Q9HBF4 MIR592-201ENST00000384959 97 ntBASIC3.23□□□□□ -1.89
ZFYVE1Q9HBF4 MIR561-201ENST00000385216 97 ntBASIC3.23□□□□□ -1.89
ZFYVE1Q9HBF4 RNA5SP467-201ENST00000391274 118 ntBASIC3.23□□□□□ -1.89
ZFYVE1Q9HBF4 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC3.23□□□□□ -1.89
ZFYVE1Q9HBF4 AC006028.1-201ENST00000438379 402 ntBASIC3.23□□□□□ -1.89
ZFYVE1Q9HBF4 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.23□□□□□ -1.89
ZFYVE1Q9HBF4 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.23□□□□□ -1.89
ZFYVE1Q9HBF4 AC096725.1-201ENST00000514266 313 ntBASIC3.23□□□□□ -1.89
ZFYVE1Q9HBF4 SNORA48.11-201ENST00000517015 89 ntBASIC3.23□□□□□ -1.89
ZFYVE1Q9HBF4 RNU6-1096P-201ENST00000517089 102 ntBASIC3.23□□□□□ -1.89
ZFYVE1Q9HBF4 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.23□□□□□ -1.89
ZFYVE1Q9HBF4 MIR3200-201ENST00000580767 85 ntBASIC3.23□□□□□ -1.89
ZFYVE1Q9HBF4 AL356280.1-201ENST00000603614 379 ntBASIC3.23□□□□□ -1.89
ZFYVE1Q9HBF4 AC073476.4-201ENST00000628409 72 ntBASIC3.23□□□□□ -1.89
ZFYVE1Q9HBF4 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
ZFYVE1Q9HBF4 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
ZFYVE1Q9HBF4 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.22□□□□□ -1.89
ZFYVE1Q9HBF4 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
ZFYVE1Q9HBF4 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
ZFYVE1Q9HBF4 Y_RNA.280-201ENST00000364765 112 ntBASIC3.22□□□□□ -1.89
ZFYVE1Q9HBF4 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.22□□□□□ -1.89
ZFYVE1Q9HBF4 AC011406.1-201ENST00000512440 370 ntBASIC3.22□□□□□ -1.89
ZFYVE1Q9HBF4 SNORA18.4-201ENST00000516440 124 ntBASIC3.22□□□□□ -1.89
ZFYVE1Q9HBF4 RNU6-856P-201ENST00000516959 98 ntBASIC3.22□□□□□ -1.89
ZFYVE1Q9HBF4 RNU1-104P-201ENST00000517280 175 ntBASIC3.22□□□□□ -1.89
ZFYVE1Q9HBF4 MIR5680-201ENST00000577577 84 ntBASIC3.22□□□□□ -1.89
ZFYVE1Q9HBF4 MIR2682-201ENST00000580305 110 ntBASIC3.22□□□□□ -1.89
ZFYVE1Q9HBF4 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.22□□□□□ -1.89
ZFYVE1Q9HBF4 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.22□□□□□ -1.89
ZFYVE1Q9HBF4 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
ZFYVE1Q9HBF4 ICE2P2-201ENST00000483823 2787 ntBASIC3.22□□□□□ -1.89
ZFYVE1Q9HBF4 SNORA9-201ENST00000384215 133 ntBASIC3.21□□□□□ -1.9
ZFYVE1Q9HBF4 MIR548A1-201ENST00000385041 97 ntBASIC3.21□□□□□ -1.9
ZFYVE1Q9HBF4 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
ZFYVE1Q9HBF4 SNORA12.1-201ENST00000390873 148 ntBASIC3.21□□□□□ -1.9
ZFYVE1Q9HBF4 MIR1289-1-201ENST00000408836 144 ntBASIC3.21□□□□□ -1.9
ZFYVE1Q9HBF4 RNU4-47P-201ENST00000410876 114 ntBASIC3.21□□□□□ -1.9
ZFYVE1Q9HBF4 AC115115.1-201ENST00000449927 248 ntBASIC3.21□□□□□ -1.9
ZFYVE1Q9HBF4 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.21□□□□□ -1.9
ZFYVE1Q9HBF4 RNA5SP153-201ENST00000516498 76 ntBASIC3.21□□□□□ -1.9
ZFYVE1Q9HBF4 RNU6-1291P-201ENST00000516591 104 ntBASIC3.21□□□□□ -1.9
ZFYVE1Q9HBF4 MIR3613-201ENST00000579844 87 ntBASIC3.21□□□□□ -1.9
ZFYVE1Q9HBF4 MIR2681-201ENST00000581814 105 ntBASIC3.21□□□□□ -1.9
ZFYVE1Q9HBF4 MIR7112-201ENST00000616126 65 ntBASIC3.21□□□□□ -1.9
ZFYVE1Q9HBF4 MIR7153-201ENST00000637758 57 ntBASIC3.21□□□□□ -1.9
ZFYVE1Q9HBF4 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
ZFYVE1Q9HBF4 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.21□□□□□ -1.9
ZFYVE1Q9HBF4 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.21□□□□□ -1.9
ZFYVE1Q9HBF4 Y_RNA.35-201ENST00000362601 101 ntBASIC3.2□□□□□ -1.9
ZFYVE1Q9HBF4 Y_RNA.52-201ENST00000362760 96 ntBASIC3.2□□□□□ -1.9
ZFYVE1Q9HBF4 RNU6-461P-201ENST00000364195 107 ntBASIC3.2□□□□□ -1.9
ZFYVE1Q9HBF4 Y_RNA.267-201ENST00000364679 109 ntBASIC3.2□□□□□ -1.9
ZFYVE1Q9HBF4 RNU6-147P-201ENST00000383983 107 ntBASIC3.2□□□□□ -1.9
ZFYVE1Q9HBF4 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.2□□□□□ -1.9
ZFYVE1Q9HBF4 AC018868.1-201ENST00000491307 315 ntBASIC3.2□□□□□ -1.9
ZFYVE1Q9HBF4 OR9P1P-201ENST00000496431 281 ntBASIC3.2□□□□□ -1.9
ZFYVE1Q9HBF4 AC091826.1-201ENST00000514065 313 ntBASIC3.2□□□□□ -1.9
ZFYVE1Q9HBF4 AC007751.1-201ENST00000529260 376 ntBASIC3.2□□□□□ -1.9
ZFYVE1Q9HBF4 MIR3129-201ENST00000581095 76 ntBASIC3.2□□□□□ -1.9
ZFYVE1Q9HBF4 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.2□□□□□ -1.9
ZFYVE1Q9HBF4 uc_338.25-201ENST00000613756 156 ntBASIC3.2□□□□□ -1.9
ZFYVE1Q9HBF4 JPX_2.1-201ENST00000614161 69 ntBASIC3.2□□□□□ -1.9
ZFYVE1Q9HBF4 MIR3651-201ENST00000630427 90 ntBASIC3.2□□□□□ -1.9
ZFYVE1Q9HBF4 AC073346.2-201ENST00000624724 2058 ntBASIC3.2□□□□□ -1.9
ZFYVE1Q9HBF4 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
ZFYVE1Q9HBF4 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
ZFYVE1Q9HBF4 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
ZFYVE1Q9HBF4 SNORD58C-201ENST00000365223 64 ntBASIC3.19□□□□□ -1.9
ZFYVE1Q9HBF4 SNORA1-201ENST00000384107 130 ntBASIC3.19□□□□□ -1.9
ZFYVE1Q9HBF4 MIR491-201ENST00000384877 84 ntBASIC3.19□□□□□ -1.9
ZFYVE1Q9HBF4 MIR562-201ENST00000384894 95 ntBASIC3.19□□□□□ -1.9
ZFYVE1Q9HBF4 MIR548A3-201ENST00000385297 97 ntBASIC3.19□□□□□ -1.9
ZFYVE1Q9HBF4 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
ZFYVE1Q9HBF4 NDUFA4P2-201ENST00000489989 244 ntBASIC3.19□□□□□ -1.9
ZFYVE1Q9HBF4 SNORA70.24-201ENST00000517233 118 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 176.6 ms