Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 AL627390.1-201ENST00000396055 340 ntBASIC3.68□□□□□ -1.82
HPS1Q92902 SNORA7.5-201ENST00000410672 110 ntBASIC3.68□□□□□ -1.82
HPS1Q92902 AL022718.1-201ENST00000412004 84 ntBASIC3.68□□□□□ -1.82
HPS1Q92902 SNRPGP14-201ENST00000435400 219 ntBASIC3.68□□□□□ -1.82
HPS1Q92902 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.68□□□□□ -1.82
HPS1Q92902 CYCSP29-201ENST00000533731 318 ntBASIC3.68□□□□□ -1.82
HPS1Q92902 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
HPS1Q92902 AC002984.1-201ENST00000591692 448 ntBASIC3.68□□□□□ -1.82
HPS1Q92902 AL513534.2-201ENST00000603836 250 ntBASIC3.68□□□□□ -1.82
HPS1Q92902 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.68□□□□□ -1.82
HPS1Q92902 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
HPS1Q92902 MIR6891-201ENST00000618788 93 ntBASIC3.68□□□□□ -1.82
HPS1Q92902 MIR8059-201ENST00000620427 81 ntBASIC3.68□□□□□ -1.82
HPS1Q92902 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.68□□□□□ -1.82
HPS1Q92902 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
HPS1Q92902 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
HPS1Q92902 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
HPS1Q92902 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.68□□□□□ -1.82
HPS1Q92902 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
HPS1Q92902 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
HPS1Q92902 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
HPS1Q92902 AL049781.1-201ENST00000623195 3585 ntBASIC3.67□□□□□ -1.82
HPS1Q92902 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.67□□□□□ -1.82
HPS1Q92902 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
HPS1Q92902 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.67□□□□□ -1.82
HPS1Q92902 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
HPS1Q92902 U8.15-201ENST00000390947 134 ntBASIC3.67□□□□□ -1.82
HPS1Q92902 RNU6-1186P-201ENST00000410429 97 ntBASIC3.67□□□□□ -1.82
HPS1Q92902 RN7SKP200-201ENST00000410564 320 ntBASIC3.67□□□□□ -1.82
HPS1Q92902 Z98742.2-201ENST00000431564 187 ntBASIC3.67□□□□□ -1.82
HPS1Q92902 HMGN2P18-201ENST00000450680 270 ntBASIC3.67□□□□□ -1.82
HPS1Q92902 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.67□□□□□ -1.82
HPS1Q92902 RNU1-61P-201ENST00000516107 151 ntBASIC3.67□□□□□ -1.82
HPS1Q92902 RNU7-128P-201ENST00000517247 62 ntBASIC3.67□□□□□ -1.82
HPS1Q92902 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC3.67□□□□□ -1.82
HPS1Q92902 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.67□□□□□ -1.82
HPS1Q92902 MIR6079-201ENST00000635807 62 ntBASIC3.67□□□□□ -1.82
HPS1Q92902 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.67□□□□□ -1.82
HPS1Q92902 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.67□□□□□ -1.82
HPS1Q92902 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.67□□□□□ -1.82
HPS1Q92902 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.66□□□□□ -1.82
HPS1Q92902 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.66□□□□□ -1.82
HPS1Q92902 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
HPS1Q92902 MIR331-201ENST00000362302 94 ntBASIC3.66□□□□□ -1.82
HPS1Q92902 SNORD14E-201ENST00000364009 85 ntBASIC3.66□□□□□ -1.82
HPS1Q92902 RNU1-132P-201ENST00000364300 164 ntBASIC3.66□□□□□ -1.82
HPS1Q92902 MIR1179-201ENST00000408703 91 ntBASIC3.66□□□□□ -1.82
HPS1Q92902 RN7SKP27-201ENST00000410684 333 ntBASIC3.66□□□□□ -1.82
HPS1Q92902 AL139247.1-201ENST00000422768 325 ntBASIC3.66□□□□□ -1.82
HPS1Q92902 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.66□□□□□ -1.82
HPS1Q92902 RPL30P14-201ENST00000482744 348 ntBASIC3.66□□□□□ -1.82
HPS1Q92902 SNORA4.4-201ENST00000515921 135 ntBASIC3.66□□□□□ -1.82
HPS1Q92902 RNU6-856P-201ENST00000516959 98 ntBASIC3.66□□□□□ -1.82
HPS1Q92902 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.66□□□□□ -1.82
HPS1Q92902 AC103810.1-201ENST00000579873 453 ntBASIC3.66□□□□□ -1.82
HPS1Q92902 MIR4712-201ENST00000583750 82 ntBASIC3.66□□□□□ -1.82
HPS1Q92902 AC096720.1-201ENST00000604441 183 ntBASIC3.66□□□□□ -1.82
HPS1Q92902 AC034229.5-201ENST00000624258 185 ntBASIC3.66□□□□□ -1.82
HPS1Q92902 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
HPS1Q92902 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
HPS1Q92902 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.82
HPS1Q92902 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
HPS1Q92902 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
HPS1Q92902 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.65□□□□□ -1.83
HPS1Q92902 MIR184-201ENST00000384962 84 ntBASIC3.65□□□□□ -1.83
HPS1Q92902 AL035398.1-201ENST00000430869 322 ntBASIC3.65□□□□□ -1.83
HPS1Q92902 HMGN2P31-201ENST00000432430 273 ntBASIC3.65□□□□□ -1.83
HPS1Q92902 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.65□□□□□ -1.83
HPS1Q92902 AP000867.2-201ENST00000532468 320 ntBASIC3.65□□□□□ -1.83
HPS1Q92902 AC145423.2-201ENST00000610631 239 ntBASIC3.65□□□□□ -1.83
HPS1Q92902 RNVU1-4-201ENST00000612985 164 ntBASIC3.65□□□□□ -1.83
HPS1Q92902 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.65□□□□□ -1.83
HPS1Q92902 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.64□□□□□ -1.83
HPS1Q92902 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.64□□□□□ -1.83
HPS1Q92902 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.64□□□□□ -1.83
HPS1Q92902 Y_RNA.267-201ENST00000364679 109 ntBASIC3.64□□□□□ -1.83
HPS1Q92902 RNU6-590P-201ENST00000365039 107 ntBASIC3.64□□□□□ -1.83
HPS1Q92902 HMGN2P34-201ENST00000437647 269 ntBASIC3.64□□□□□ -1.83
HPS1Q92902 AC083863.1-201ENST00000438811 231 ntBASIC3.64□□□□□ -1.83
HPS1Q92902 U4atac.1-201ENST00000618345 95 ntBASIC3.64□□□□□ -1.83
HPS1Q92902 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.64□□□□□ -1.83
HPS1Q92902 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.64□□□□□ -1.83
HPS1Q92902 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
HPS1Q92902 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC3.64□□□□□ -1.83
HPS1Q92902 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
HPS1Q92902 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
HPS1Q92902 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
HPS1Q92902 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
HPS1Q92902 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.63□□□□□ -1.83
HPS1Q92902 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
HPS1Q92902 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.63□□□□□ -1.83
HPS1Q92902 RNA5SP317-201ENST00000410176 116 ntBASIC3.63□□□□□ -1.83
HPS1Q92902 RNA5SP311-201ENST00000411290 116 ntBASIC3.63□□□□□ -1.83
HPS1Q92902 AC106707.2-201ENST00000484182 374 ntBASIC3.63□□□□□ -1.83
HPS1Q92902 RNA5SP315-201ENST00000516340 116 ntBASIC3.63□□□□□ -1.83
HPS1Q92902 RNA5SP312-201ENST00000517068 116 ntBASIC3.63□□□□□ -1.83
HPS1Q92902 AC006064.5-201ENST00000541782 248 ntBASIC3.63□□□□□ -1.83
HPS1Q92902 TVP23BP1-201ENST00000557500 617 ntBASIC3.63□□□□□ -1.83
HPS1Q92902 MIR4762-201ENST00000585261 75 ntBASIC3.63□□□□□ -1.83
HPS1Q92902 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 135.4 ms