Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 AL035425.3-201ENST00000564206 4996 ntBASIC2.79□□□□□ -1.96
TRIM48Q8IWZ4 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
TRIM48Q8IWZ4 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
TRIM48Q8IWZ4 AL161431.1-201ENST00000618966 4205 ntBASIC2.79□□□□□ -1.96
TRIM48Q8IWZ4 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.78□□□□□ -1.96
TRIM48Q8IWZ4 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.78□□□□□ -1.96
TRIM48Q8IWZ4 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
TRIM48Q8IWZ4 SNORD113-1-201ENST00000365321 69 ntBASIC2.78□□□□□ -1.96
TRIM48Q8IWZ4 Y_RNA.568-201ENST00000384742 113 ntBASIC2.78□□□□□ -1.96
TRIM48Q8IWZ4 MIR181B1-201ENST00000385240 110 ntBASIC2.78□□□□□ -1.96
TRIM48Q8IWZ4 RNU6-1228P-201ENST00000391014 107 ntBASIC2.78□□□□□ -1.96
TRIM48Q8IWZ4 Y_RNA.622-201ENST00000411091 108 ntBASIC2.78□□□□□ -1.96
TRIM48Q8IWZ4 AC060773.1-201ENST00000421698 310 ntBASIC2.78□□□□□ -1.96
TRIM48Q8IWZ4 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.78□□□□□ -1.96
TRIM48Q8IWZ4 AC105272.1-201ENST00000438604 198 ntBASIC2.78□□□□□ -1.96
TRIM48Q8IWZ4 RNU6-437P-201ENST00000459408 95 ntBASIC2.78□□□□□ -1.96
TRIM48Q8IWZ4 RPL36AP21-201ENST00000490372 323 ntBASIC2.78□□□□□ -1.96
TRIM48Q8IWZ4 AC018868.1-201ENST00000491307 315 ntBASIC2.78□□□□□ -1.96
TRIM48Q8IWZ4 RNA5SP76-201ENST00000516277 87 ntBASIC2.78□□□□□ -1.96
TRIM48Q8IWZ4 RNU2-34P-201ENST00000516534 121 ntBASIC2.78□□□□□ -1.96
TRIM48Q8IWZ4 RNU7-116P-201ENST00000516940 62 ntBASIC2.78□□□□□ -1.96
TRIM48Q8IWZ4 GTF3AP2-201ENST00000557014 266 ntBASIC2.78□□□□□ -1.96
TRIM48Q8IWZ4 MIR5688-201ENST00000580619 83 ntBASIC2.78□□□□□ -1.96
TRIM48Q8IWZ4 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
TRIM48Q8IWZ4 AC103988.1-201ENST00000566382 2177 ntBASIC2.78□□□□□ -1.96
TRIM48Q8IWZ4 AC009487.4-201ENST00000624969 3585 ntBASIC2.78□□□□□ -1.96
TRIM48Q8IWZ4 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.78□□□□□ -1.96
TRIM48Q8IWZ4 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.78□□□□□ -1.96
TRIM48Q8IWZ4 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.77□□□□□ -1.97
TRIM48Q8IWZ4 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.77□□□□□ -1.97
TRIM48Q8IWZ4 CENPCP1-201ENST00000533085 2578 ntBASIC2.77□□□□□ -1.97
TRIM48Q8IWZ4 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.77□□□□□ -1.97
TRIM48Q8IWZ4 RNU1-22P-201ENST00000363334 158 ntBASIC2.77□□□□□ -1.97
TRIM48Q8IWZ4 Y_RNA.291-201ENST00000364886 113 ntBASIC2.77□□□□□ -1.97
TRIM48Q8IWZ4 RNU6-81P-201ENST00000365608 104 ntBASIC2.77□□□□□ -1.97
TRIM48Q8IWZ4 MIR512-1-201ENST00000384913 84 ntBASIC2.77□□□□□ -1.97
TRIM48Q8IWZ4 MIR592-201ENST00000384959 97 ntBASIC2.77□□□□□ -1.97
TRIM48Q8IWZ4 MIR561-201ENST00000385216 97 ntBASIC2.77□□□□□ -1.97
TRIM48Q8IWZ4 MIR569-201ENST00000385228 96 ntBASIC2.77□□□□□ -1.97
TRIM48Q8IWZ4 Y_RNA.587-201ENST00000391210 103 ntBASIC2.77□□□□□ -1.97
TRIM48Q8IWZ4 MIR1253-201ENST00000408273 105 ntBASIC2.77□□□□□ -1.97
TRIM48Q8IWZ4 AL513477.1-202ENST00000417061 214 ntBASIC2.77□□□□□ -1.97
TRIM48Q8IWZ4 AL357134.1-201ENST00000445848 426 ntBASIC2.77□□□□□ -1.97
TRIM48Q8IWZ4 RN7SL499P-201ENST00000481141 276 ntBASIC2.77□□□□□ -1.97
TRIM48Q8IWZ4 SNORA25.12-201ENST00000516202 82 ntBASIC2.77□□□□□ -1.97
TRIM48Q8IWZ4 RNU7-172P-201ENST00000517125 64 ntBASIC2.77□□□□□ -1.97
TRIM48Q8IWZ4 AL929325.1-201ENST00000603096 117 ntBASIC2.77□□□□□ -1.97
TRIM48Q8IWZ4 AC012640.5-201ENST00000623897 319 ntBASIC2.77□□□□□ -1.97
TRIM48Q8IWZ4 AC006435.5-201ENST00000624486 112 ntBASIC2.77□□□□□ -1.97
TRIM48Q8IWZ4 ZNF702P-202ENST00000434269 1966 ntBASIC2.76□□□□□ -1.97
TRIM48Q8IWZ4 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
TRIM48Q8IWZ4 RNU4-41P-201ENST00000364426 143 ntBASIC2.76□□□□□ -1.97
TRIM48Q8IWZ4 RNU6-728P-201ENST00000365375 104 ntBASIC2.76□□□□□ -1.97
TRIM48Q8IWZ4 U8.9-201ENST00000365667 134 ntBASIC2.76□□□□□ -1.97
TRIM48Q8IWZ4 SNORA20-201ENST00000384662 132 ntBASIC2.76□□□□□ -1.97
TRIM48Q8IWZ4 AL031121.1-201ENST00000406553 254 ntBASIC2.76□□□□□ -1.97
TRIM48Q8IWZ4 HMGN2P34-201ENST00000437647 269 ntBASIC2.76□□□□□ -1.97
TRIM48Q8IWZ4 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC2.76□□□□□ -1.97
TRIM48Q8IWZ4 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.76□□□□□ -1.97
TRIM48Q8IWZ4 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.76□□□□□ -1.97
TRIM48Q8IWZ4 AC097462.1-201ENST00000514125 324 ntBASIC2.76□□□□□ -1.97
TRIM48Q8IWZ4 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.76□□□□□ -1.97
TRIM48Q8IWZ4 U2.20-201ENST00000613956 192 ntBASIC2.76□□□□□ -1.97
TRIM48Q8IWZ4 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.76□□□□□ -1.97
TRIM48Q8IWZ4 AC100821.1-201ENST00000523153 2479 ntBASIC2.76□□□□□ -1.97
TRIM48Q8IWZ4 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
TRIM48Q8IWZ4 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.75□□□□□ -1.97
TRIM48Q8IWZ4 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
TRIM48Q8IWZ4 Y_RNA.337-201ENST00000365312 102 ntBASIC2.75□□□□□ -1.97
TRIM48Q8IWZ4 RNU6-643P-201ENST00000384018 107 ntBASIC2.75□□□□□ -1.97
TRIM48Q8IWZ4 RNU6-417P-201ENST00000384712 107 ntBASIC2.75□□□□□ -1.97
TRIM48Q8IWZ4 RNU6-376P-201ENST00000384731 106 ntBASIC2.75□□□□□ -1.97
TRIM48Q8IWZ4 CYCSP49-201ENST00000420810 319 ntBASIC2.75□□□□□ -1.97
TRIM48Q8IWZ4 AC003685.2-201ENST00000422795 395 ntBASIC2.75□□□□□ -1.97
TRIM48Q8IWZ4 RPS4XP11-201ENST00000446897 772 ntBASIC2.75□□□□□ -1.97
TRIM48Q8IWZ4 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.75□□□□□ -1.97
TRIM48Q8IWZ4 RNU6-856P-201ENST00000516959 98 ntBASIC2.75□□□□□ -1.97
TRIM48Q8IWZ4 MIR548X2-201ENST00000579776 100 ntBASIC2.75□□□□□ -1.97
TRIM48Q8IWZ4 DNAJC19P2-201ENST00000593340 302 ntBASIC2.75□□□□□ -1.97
TRIM48Q8IWZ4 AL033523.1-201ENST00000605153 153 ntBASIC2.75□□□□□ -1.97
TRIM48Q8IWZ4 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
TRIM48Q8IWZ4 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
TRIM48Q8IWZ4 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
TRIM48Q8IWZ4 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
TRIM48Q8IWZ4 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.74□□□□□ -1.97
TRIM48Q8IWZ4 SNORA72-201ENST00000384339 132 ntBASIC2.74□□□□□ -1.97
TRIM48Q8IWZ4 SNORA26.7-201ENST00000391288 122 ntBASIC2.74□□□□□ -1.97
TRIM48Q8IWZ4 MIR887-201ENST00000401258 79 ntBASIC2.74□□□□□ -1.97
TRIM48Q8IWZ4 RNU6-1186P-201ENST00000410429 97 ntBASIC2.74□□□□□ -1.97
TRIM48Q8IWZ4 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.74□□□□□ -1.97
TRIM48Q8IWZ4 RPL39P40-201ENST00000445481 146 ntBASIC2.74□□□□□ -1.97
TRIM48Q8IWZ4 SNRPGP8-201ENST00000454064 226 ntBASIC2.74□□□□□ -1.97
TRIM48Q8IWZ4 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.74□□□□□ -1.97
TRIM48Q8IWZ4 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.74□□□□□ -1.97
TRIM48Q8IWZ4 AL049861.1-201ENST00000603130 150 ntBASIC2.74□□□□□ -1.97
TRIM48Q8IWZ4 AC004832.5-201ENST00000608677 401 ntBASIC2.74□□□□□ -1.97
TRIM48Q8IWZ4 AC110774.1-201ENST00000623567 2018 ntBASIC2.74□□□□□ -1.97
TRIM48Q8IWZ4 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
TRIM48Q8IWZ4 RNU6-199P-201ENST00000362954 107 ntBASIC2.73□□□□□ -1.97
TRIM48Q8IWZ4 RNU6-674P-201ENST00000363831 107 ntBASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms