Protein–RNA interactions for Protein: Q5W0Q7

USPL1, SUMO-specific isopeptidase USPL1, humanhuman

Predictions only

Length 1,092 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USPL1Q5W0Q7 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC3.5□□□□□ -1.85
USPL1Q5W0Q7 RNU6-437P-201ENST00000459408 95 ntBASIC3.5□□□□□ -1.85
USPL1Q5W0Q7 AC010531.2-201ENST00000465012 153 ntBASIC3.5□□□□□ -1.85
USPL1Q5W0Q7 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC3.5□□□□□ -1.85
USPL1Q5W0Q7 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.5□□□□□ -1.85
USPL1Q5W0Q7 MIR3199-1-201ENST00000582434 88 ntBASIC3.5□□□□□ -1.85
USPL1Q5W0Q7 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
USPL1Q5W0Q7 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
USPL1Q5W0Q7 AC080128.1-201ENST00000474389 1917 ntBASIC3.5□□□□□ -1.85
USPL1Q5W0Q7 AC093010.3-201ENST00000570269 15214 ntBASIC3.5□□□□□ -1.85
USPL1Q5W0Q7 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.5□□□□□ -1.85
USPL1Q5W0Q7 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
USPL1Q5W0Q7 RNU6-257P-201ENST00000410238 98 ntBASIC3.49□□□□□ -1.85
USPL1Q5W0Q7 AC006461.1-201ENST00000412637 326 ntBASIC3.49□□□□□ -1.85
USPL1Q5W0Q7 AL161788.1-201ENST00000441805 169 ntBASIC3.49□□□□□ -1.85
USPL1Q5W0Q7 AL357134.1-201ENST00000445848 426 ntBASIC3.49□□□□□ -1.85
USPL1Q5W0Q7 AC016717.1-201ENST00000448918 286 ntBASIC3.49□□□□□ -1.85
USPL1Q5W0Q7 AL137159.1-201ENST00000452808 512 ntBASIC3.49□□□□□ -1.85
USPL1Q5W0Q7 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.49□□□□□ -1.85
USPL1Q5W0Q7 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.49□□□□□ -1.85
USPL1Q5W0Q7 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
USPL1Q5W0Q7 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
USPL1Q5W0Q7 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.48□□□□□ -1.85
USPL1Q5W0Q7 MT-TT-201ENST00000387460 66 ntBASIC3.48□□□□□ -1.85
USPL1Q5W0Q7 RPL23AP58-201ENST00000440453 469 ntBASIC3.48□□□□□ -1.85
USPL1Q5W0Q7 HMGN2P18-201ENST00000450680 270 ntBASIC3.48□□□□□ -1.85
USPL1Q5W0Q7 AP004217.1-201ENST00000480579 346 ntBASIC3.48□□□□□ -1.85
USPL1Q5W0Q7 RPL23AP54-201ENST00000495129 419 ntBASIC3.48□□□□□ -1.85
USPL1Q5W0Q7 RNA5SP490-201ENST00000517141 136 ntBASIC3.48□□□□□ -1.85
USPL1Q5W0Q7 AL356280.1-201ENST00000603614 379 ntBASIC3.48□□□□□ -1.85
USPL1Q5W0Q7 AC090115.4-201ENST00000609970 188 ntBASIC3.48□□□□□ -1.85
USPL1Q5W0Q7 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
USPL1Q5W0Q7 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
USPL1Q5W0Q7 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
USPL1Q5W0Q7 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
USPL1Q5W0Q7 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.47□□□□□ -1.85
USPL1Q5W0Q7 AL356292.1-201ENST00000283110 373 ntBASIC3.47□□□□□ -1.85
USPL1Q5W0Q7 RNU6-117P-201ENST00000365415 107 ntBASIC3.47□□□□□ -1.85
USPL1Q5W0Q7 RNU6-1154P-201ENST00000391001 104 ntBASIC3.47□□□□□ -1.85
USPL1Q5W0Q7 FO393413.1-201ENST00000402892 195 ntBASIC3.47□□□□□ -1.85
USPL1Q5W0Q7 RNU6-383P-201ENST00000410864 94 ntBASIC3.47□□□□□ -1.85
USPL1Q5W0Q7 RNU2-32P-201ENST00000411193 191 ntBASIC3.47□□□□□ -1.85
USPL1Q5W0Q7 RN7SKP101-201ENST00000411376 320 ntBASIC3.47□□□□□ -1.85
USPL1Q5W0Q7 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC3.47□□□□□ -1.85
USPL1Q5W0Q7 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC3.47□□□□□ -1.85
USPL1Q5W0Q7 AC008267.6-201ENST00000441664 139 ntBASIC3.47□□□□□ -1.85
USPL1Q5W0Q7 SNORA48.11-201ENST00000517015 89 ntBASIC3.47□□□□□ -1.85
USPL1Q5W0Q7 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC3.47□□□□□ -1.85
USPL1Q5W0Q7 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC3.47□□□□□ -1.85
USPL1Q5W0Q7 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.47□□□□□ -1.85
USPL1Q5W0Q7 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3.47□□□□□ -1.85
USPL1Q5W0Q7 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
USPL1Q5W0Q7 AC012640.5-201ENST00000623897 319 ntBASIC3.47□□□□□ -1.85
USPL1Q5W0Q7 MIR1248-201ENST00000629190 106 ntBASIC3.47□□□□□ -1.85
USPL1Q5W0Q7 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3.47□□□□□ -1.85
USPL1Q5W0Q7 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
USPL1Q5W0Q7 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.47□□□□□ -1.85
USPL1Q5W0Q7 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
USPL1Q5W0Q7 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
USPL1Q5W0Q7 AC008264.2-201ENST00000610193 3731 ntBASIC3.46□□□□□ -1.85
USPL1Q5W0Q7 RNU4-13P-201ENST00000364019 141 ntBASIC3.46□□□□□ -1.86
USPL1Q5W0Q7 MIR539-201ENST00000365690 78 ntBASIC3.46□□□□□ -1.86
USPL1Q5W0Q7 RNU6-418P-201ENST00000384035 107 ntBASIC3.46□□□□□ -1.86
USPL1Q5W0Q7 MIR218-1-201ENST00000384999 110 ntBASIC3.46□□□□□ -1.86
USPL1Q5W0Q7 RNU6-1168P-201ENST00000390831 104 ntBASIC3.46□□□□□ -1.86
USPL1Q5W0Q7 RNU2-55P-201ENST00000411146 174 ntBASIC3.46□□□□□ -1.86
USPL1Q5W0Q7 RPS27P1-201ENST00000450552 247 ntBASIC3.46□□□□□ -1.86
USPL1Q5W0Q7 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC3.46□□□□□ -1.86
USPL1Q5W0Q7 CKS1BP2-201ENST00000497342 240 ntBASIC3.46□□□□□ -1.86
USPL1Q5W0Q7 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC3.46□□□□□ -1.86
USPL1Q5W0Q7 AC112693.2-201ENST00000556538 232 ntBASIC3.46□□□□□ -1.86
USPL1Q5W0Q7 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC3.46□□□□□ -1.86
USPL1Q5W0Q7 SNORD53-201ENST00000579969 78 ntBASIC3.46□□□□□ -1.86
USPL1Q5W0Q7 AC023043.3-201ENST00000593113 385 ntBASIC3.46□□□□□ -1.86
USPL1Q5W0Q7 AC064859.1-201ENST00000624741 174 ntBASIC3.46□□□□□ -1.86
USPL1Q5W0Q7 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC3.46□□□□□ -1.86
USPL1Q5W0Q7 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
USPL1Q5W0Q7 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.46□□□□□ -1.86
USPL1Q5W0Q7 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
USPL1Q5W0Q7 RNU6-818P-201ENST00000364837 108 ntBASIC3.45□□□□□ -1.86
USPL1Q5W0Q7 SNORA72-201ENST00000384339 132 ntBASIC3.45□□□□□ -1.86
USPL1Q5W0Q7 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
USPL1Q5W0Q7 SNORA79-201ENST00000408376 140 ntBASIC3.45□□□□□ -1.86
USPL1Q5W0Q7 MIR1278-201ENST00000408753 81 ntBASIC3.45□□□□□ -1.86
USPL1Q5W0Q7 AC096725.1-201ENST00000514266 313 ntBASIC3.45□□□□□ -1.86
USPL1Q5W0Q7 RNA5SP24-201ENST00000516478 95 ntBASIC3.45□□□□□ -1.86
USPL1Q5W0Q7 SNORA50A-202ENST00000629536 136 ntBASIC3.45□□□□□ -1.86
USPL1Q5W0Q7 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.45□□□□□ -1.86
USPL1Q5W0Q7 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.45□□□□□ -1.86
USPL1Q5W0Q7 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
USPL1Q5W0Q7 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
USPL1Q5W0Q7 MIR181B1-201ENST00000385240 110 ntBASIC3.44□□□□□ -1.86
USPL1Q5W0Q7 SNORD37.2-201ENST00000391075 66 ntBASIC3.44□□□□□ -1.86
USPL1Q5W0Q7 RNU2-63P-201ENST00000410792 194 ntBASIC3.44□□□□□ -1.86
USPL1Q5W0Q7 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
USPL1Q5W0Q7 AC123900.1-201ENST00000420390 96 ntBASIC3.44□□□□□ -1.86
USPL1Q5W0Q7 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC3.44□□□□□ -1.86
USPL1Q5W0Q7 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.44□□□□□ -1.86
USPL1Q5W0Q7 MTCO1P44-201ENST00000441935 243 ntBASIC3.44□□□□□ -1.86
USPL1Q5W0Q7 RPS27P22-201ENST00000478056 241 ntBASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 129.3 ms