Protein–RNA interactions for Protein: P49642

PRIM1, DNA primase small subunit, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1P49642 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
PRIM1P49642 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
PRIM1P49642 AC018630.2-201ENST00000534866 2403 ntBASIC4.42□□□□□ -1.7
PRIM1P49642 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
PRIM1P49642 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.41□□□□□ -1.7
PRIM1P49642 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC4.41□□□□□ -1.7
PRIM1P49642 Y_RNA.362-201ENST00000365518 110 ntBASIC4.41□□□□□ -1.7
PRIM1P49642 SNORA51.10-201ENST00000384418 136 ntBASIC4.41□□□□□ -1.7
PRIM1P49642 RNU4-47P-201ENST00000410876 114 ntBASIC4.41□□□□□ -1.7
PRIM1P49642 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC4.41□□□□□ -1.7
PRIM1P49642 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC4.41□□□□□ -1.7
PRIM1P49642 RNA5SP490-201ENST00000517141 136 ntBASIC4.41□□□□□ -1.7
PRIM1P49642 5S_rRNA.11-201ENST00000618635 84 ntBASIC4.41□□□□□ -1.7
PRIM1P49642 AL035470.1-201ENST00000622571 220 ntBASIC4.41□□□□□ -1.7
PRIM1P49642 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC4.41□□□□□ -1.7
PRIM1P49642 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PRIM1P49642 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC4.41□□□□□ -1.7
PRIM1P49642 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PRIM1P49642 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.41□□□□□ -1.7
PRIM1P49642 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC4.41□□□□□ -1.7
PRIM1P49642 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PRIM1P49642 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
PRIM1P49642 RNA5SP42-201ENST00000364278 115 ntBASIC4.4□□□□□ -1.71
PRIM1P49642 SNORD77.3-201ENST00000391113 65 ntBASIC4.4□□□□□ -1.71
PRIM1P49642 AC025750.2-201ENST00000442609 450 ntBASIC4.4□□□□□ -1.71
PRIM1P49642 HMGN2P18-201ENST00000450680 270 ntBASIC4.4□□□□□ -1.71
PRIM1P49642 AC068339.1-201ENST00000526965 141 ntBASIC4.4□□□□□ -1.71
PRIM1P49642 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC4.4□□□□□ -1.71
PRIM1P49642 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.4□□□□□ -1.71
PRIM1P49642 AC093908.1-201ENST00000623125 8092 ntBASIC4.4□□□□□ -1.71
PRIM1P49642 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
PRIM1P49642 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC4.4□□□□□ -1.71
PRIM1P49642 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC4.39□□□□□ -1.71
PRIM1P49642 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PRIM1P49642 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC4.39□□□□□ -1.71
PRIM1P49642 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PRIM1P49642 SNORA44-201ENST00000384584 132 ntBASIC4.39□□□□□ -1.71
PRIM1P49642 MIR450A2-201ENST00000385022 100 ntBASIC4.39□□□□□ -1.71
PRIM1P49642 RNU6-1275P-201ENST00000391087 107 ntBASIC4.39□□□□□ -1.71
PRIM1P49642 RNA5SP252-201ENST00000391131 119 ntBASIC4.39□□□□□ -1.71
PRIM1P49642 RNA5SP309-201ENST00000516670 106 ntBASIC4.39□□□□□ -1.71
PRIM1P49642 RNU6-856P-201ENST00000516959 98 ntBASIC4.39□□□□□ -1.71
PRIM1P49642 AC068657.1-201ENST00000520807 306 ntBASIC4.39□□□□□ -1.71
PRIM1P49642 AC007229.1-201ENST00000590455 412 ntBASIC4.39□□□□□ -1.71
PRIM1P49642 HNRNPDLP4-201ENST00000605144 301 ntBASIC4.39□□□□□ -1.71
PRIM1P49642 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC4.39□□□□□ -1.71
PRIM1P49642 AC134878.1-201ENST00000619901 243 ntBASIC4.39□□□□□ -1.71
PRIM1P49642 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PRIM1P49642 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PRIM1P49642 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC4.39□□□□□ -1.71
PRIM1P49642 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PRIM1P49642 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
PRIM1P49642 MFSD8-233ENST00000641482 4860 ntBASIC4.38□□□□□ -1.71
PRIM1P49642 RNU6-414P-201ENST00000363705 104 ntBASIC4.38□□□□□ -1.71
PRIM1P49642 RNU1-96P-201ENST00000364163 162 ntBASIC4.38□□□□□ -1.71
PRIM1P49642 RNU6-283P-201ENST00000364788 107 ntBASIC4.38□□□□□ -1.71
PRIM1P49642 SNORD6-201ENST00000365444 73 ntBASIC4.38□□□□□ -1.71
PRIM1P49642 RN7SL429P-201ENST00000479090 223 ntBASIC4.38□□□□□ -1.71
PRIM1P49642 RN7SL489P-201ENST00000486185 223 ntBASIC4.38□□□□□ -1.71
PRIM1P49642 RN7SL327P-201ENST00000488659 223 ntBASIC4.38□□□□□ -1.71
PRIM1P49642 RNU7-99P-201ENST00000516271 62 ntBASIC4.38□□□□□ -1.71
PRIM1P49642 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC4.38□□□□□ -1.71
PRIM1P49642 RN7SL853P-201ENST00000617250 223 ntBASIC4.38□□□□□ -1.71
PRIM1P49642 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
PRIM1P49642 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PRIM1P49642 AC080128.1-201ENST00000474389 1917 ntBASIC4.38□□□□□ -1.71
PRIM1P49642 AL596211.1-201ENST00000569873 2277 ntBASIC4.38□□□□□ -1.71
PRIM1P49642 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
PRIM1P49642 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
PRIM1P49642 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
PRIM1P49642 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
PRIM1P49642 MIR184-201ENST00000384962 84 ntBASIC4.37□□□□□ -1.71
PRIM1P49642 MIR802-201ENST00000390235 94 ntBASIC4.37□□□□□ -1.71
PRIM1P49642 AL117342.1-201ENST00000404861 406 ntBASIC4.37□□□□□ -1.71
PRIM1P49642 RNU6-1077P-201ENST00000410506 102 ntBASIC4.37□□□□□ -1.71
PRIM1P49642 AC009969.1-201ENST00000438726 172 ntBASIC4.37□□□□□ -1.71
PRIM1P49642 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC4.37□□□□□ -1.71
PRIM1P49642 SNORA70.14-201ENST00000516205 110 ntBASIC4.37□□□□□ -1.71
PRIM1P49642 RNU7-70P-201ENST00000516941 66 ntBASIC4.37□□□□□ -1.71
PRIM1P49642 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PRIM1P49642 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
PRIM1P49642 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.36□□□□□ -1.71
PRIM1P49642 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PRIM1P49642 Y_RNA.93-201ENST00000363066 109 ntBASIC4.36□□□□□ -1.71
PRIM1P49642 Y_RNA.253-201ENST00000364562 112 ntBASIC4.36□□□□□ -1.71
PRIM1P49642 RNU6-690P-201ENST00000365242 106 ntBASIC4.36□□□□□ -1.71
PRIM1P49642 MTATP8P2-201ENST00000435212 202 ntBASIC4.36□□□□□ -1.71
PRIM1P49642 AC099677.2-201ENST00000436385 175 ntBASIC4.36□□□□□ -1.71
PRIM1P49642 RNU6-240P-201ENST00000516098 97 ntBASIC4.36□□□□□ -1.71
PRIM1P49642 Y_RNA.666-201ENST00000516187 112 ntBASIC4.36□□□□□ -1.71
PRIM1P49642 SCARNA11.3-201ENST00000517276 130 ntBASIC4.36□□□□□ -1.71
PRIM1P49642 AC084364.2-201ENST00000546924 395 ntBASIC4.36□□□□□ -1.71
PRIM1P49642 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC4.36□□□□□ -1.71
PRIM1P49642 AC073413.2-201ENST00000604332 360 ntBASIC4.36□□□□□ -1.71
PRIM1P49642 RNVU1-4-201ENST00000612985 164 ntBASIC4.36□□□□□ -1.71
PRIM1P49642 U2.20-201ENST00000613956 192 ntBASIC4.36□□□□□ -1.71
PRIM1P49642 AL137790.1-201ENST00000634283 177 ntBASIC4.36□□□□□ -1.71
PRIM1P49642 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
PRIM1P49642 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
PRIM1P49642 MAPK10-373ENST00000641983 6772 ntBASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms