Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
PTCD1O75127 MAPK10-322ENST00000641485 4530 ntBASIC3.76□□□□□ -1.81
PTCD1O75127 AL356292.1-201ENST00000283110 373 ntBASIC3.76□□□□□ -1.81
PTCD1O75127 Y_RNA.114-201ENST00000363265 113 ntBASIC3.76□□□□□ -1.81
PTCD1O75127 Y_RNA.116-201ENST00000363292 103 ntBASIC3.76□□□□□ -1.81
PTCD1O75127 SNORD45.3-201ENST00000363836 72 ntBASIC3.76□□□□□ -1.81
PTCD1O75127 SNORD58C-201ENST00000365223 64 ntBASIC3.76□□□□□ -1.81
PTCD1O75127 RNU4-43P-201ENST00000410628 137 ntBASIC3.76□□□□□ -1.81
PTCD1O75127 RNY4P29-201ENST00000410801 97 ntBASIC3.76□□□□□ -1.81
PTCD1O75127 RHEBP3-201ENST00000411920 351 ntBASIC3.76□□□□□ -1.81
PTCD1O75127 CKS1BP2-201ENST00000497342 240 ntBASIC3.76□□□□□ -1.81
PTCD1O75127 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.76□□□□□ -1.81
PTCD1O75127 RNU6-948P-201ENST00000516374 107 ntBASIC3.76□□□□□ -1.81
PTCD1O75127 RNU6-537P-201ENST00000517277 103 ntBASIC3.76□□□□□ -1.81
PTCD1O75127 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC3.76□□□□□ -1.81
PTCD1O75127 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3.76□□□□□ -1.81
PTCD1O75127 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3.76□□□□□ -1.81
PTCD1O75127 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
PTCD1O75127 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
PTCD1O75127 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.75□□□□□ -1.81
PTCD1O75127 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
PTCD1O75127 RNU6-640P-201ENST00000363693 105 ntBASIC3.75□□□□□ -1.81
PTCD1O75127 RNU6-743P-201ENST00000364151 106 ntBASIC3.75□□□□□ -1.81
PTCD1O75127 U8.6-201ENST00000364939 135 ntBASIC3.75□□□□□ -1.81
PTCD1O75127 MIR548A1-201ENST00000385041 97 ntBASIC3.75□□□□□ -1.81
PTCD1O75127 MIR548A3-201ENST00000385297 97 ntBASIC3.75□□□□□ -1.81
PTCD1O75127 MIR1278-201ENST00000408753 81 ntBASIC3.75□□□□□ -1.81
PTCD1O75127 RPS29P24-201ENST00000486345 171 ntBASIC3.75□□□□□ -1.81
PTCD1O75127 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC3.75□□□□□ -1.81
PTCD1O75127 RNA5SP217-201ENST00000515959 91 ntBASIC3.75□□□□□ -1.81
PTCD1O75127 RNA5SP20-201ENST00000515976 84 ntBASIC3.75□□□□□ -1.81
PTCD1O75127 RNU6-63P-201ENST00000516690 95 ntBASIC3.75□□□□□ -1.81
PTCD1O75127 RNU2-60P-201ENST00000517290 128 ntBASIC3.75□□□□□ -1.81
PTCD1O75127 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.75□□□□□ -1.81
PTCD1O75127 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.75□□□□□ -1.81
PTCD1O75127 MIR5688-201ENST00000580619 83 ntBASIC3.75□□□□□ -1.81
PTCD1O75127 MIR7157-201ENST00000635801 60 ntBASIC3.75□□□□□ -1.81
PTCD1O75127 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.75□□□□□ -1.81
PTCD1O75127 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
PTCD1O75127 AL159152.1-201ENST00000635019 2587 ntBASIC3.75□□□□□ -1.81
PTCD1O75127 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
PTCD1O75127 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC3.75□□□□□ -1.81
PTCD1O75127 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
PTCD1O75127 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
PTCD1O75127 U6atac.2-201ENST00000408644 118 ntBASIC3.74□□□□□ -1.81
PTCD1O75127 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.74□□□□□ -1.81
PTCD1O75127 AC063976.3-201ENST00000426849 329 ntBASIC3.74□□□□□ -1.81
PTCD1O75127 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.74□□□□□ -1.81
PTCD1O75127 AC018630.3-201ENST00000542637 96 ntBASIC3.74□□□□□ -1.81
PTCD1O75127 Y_RNA.757-201ENST00000578934 114 ntBASIC3.74□□□□□ -1.81
PTCD1O75127 POLR3GP1-201ENST00000594073 261 ntBASIC3.74□□□□□ -1.81
PTCD1O75127 AC004832.5-201ENST00000608677 401 ntBASIC3.74□□□□□ -1.81
PTCD1O75127 UGP2-230ENST00000626380 276 ntTSL 5 BASIC3.74□□□□□ -1.81
PTCD1O75127 MIR1248-201ENST00000629190 106 ntBASIC3.74□□□□□ -1.81
PTCD1O75127 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
PTCD1O75127 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC3.73□□□□□ -1.81
PTCD1O75127 AC091152.2-201ENST00000591628 2569 ntBASIC3.73□□□□□ -1.81
PTCD1O75127 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
PTCD1O75127 AL035425.3-201ENST00000564206 4996 ntBASIC3.73□□□□□ -1.81
PTCD1O75127 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
PTCD1O75127 SNORD56.3-201ENST00000363507 71 ntBASIC3.73□□□□□ -1.81
PTCD1O75127 RNU6-597P-201ENST00000365620 102 ntBASIC3.73□□□□□ -1.81
PTCD1O75127 MIR181A2-201ENST00000384863 110 ntBASIC3.73□□□□□ -1.81
PTCD1O75127 AL031737.1-201ENST00000450125 223 ntBASIC3.73□□□□□ -1.81
PTCD1O75127 SNRPGP8-201ENST00000454064 226 ntBASIC3.73□□□□□ -1.81
PTCD1O75127 SNORD109B-201ENST00000458961 67 ntBASIC3.73□□□□□ -1.81
PTCD1O75127 SNORD109A-201ENST00000459128 67 ntBASIC3.73□□□□□ -1.81
PTCD1O75127 AC080013.2-201ENST00000460866 323 ntBASIC3.73□□□□□ -1.81
PTCD1O75127 RPL23AP54-201ENST00000495129 419 ntBASIC3.73□□□□□ -1.81
PTCD1O75127 SEM1P1-201ENST00000506694 209 ntBASIC3.73□□□□□ -1.81
PTCD1O75127 RNA5SP490-201ENST00000517141 136 ntBASIC3.73□□□□□ -1.81
PTCD1O75127 AC090142.3-201ENST00000519012 385 ntBASIC3.73□□□□□ -1.81
PTCD1O75127 MIR3945-201ENST00000581853 98 ntBASIC3.73□□□□□ -1.81
PTCD1O75127 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.73□□□□□ -1.81
PTCD1O75127 AC005972.2-201ENST00000604690 348 ntBASIC3.73□□□□□ -1.81
PTCD1O75127 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.73□□□□□ -1.81
PTCD1O75127 MIR5739-201ENST00000619803 80 ntBASIC3.73□□□□□ -1.81
PTCD1O75127 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
PTCD1O75127 AL596211.1-201ENST00000569873 2277 ntBASIC3.73□□□□□ -1.81
PTCD1O75127 AC093010.3-201ENST00000570269 15214 ntBASIC3.73□□□□□ -1.81
PTCD1O75127 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
PTCD1O75127 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
PTCD1O75127 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
PTCD1O75127 Y_RNA.348-201ENST00000365403 103 ntBASIC3.72□□□□□ -1.81
PTCD1O75127 RNU6-546P-201ENST00000383991 107 ntBASIC3.72□□□□□ -1.81
PTCD1O75127 RNU6-106P-201ENST00000384405 107 ntBASIC3.72□□□□□ -1.81
PTCD1O75127 RNU6-1235P-201ENST00000384559 107 ntBASIC3.72□□□□□ -1.81
PTCD1O75127 FO393413.1-201ENST00000402892 195 ntBASIC3.72□□□□□ -1.81
PTCD1O75127 RNU2-32P-201ENST00000411193 191 ntBASIC3.72□□□□□ -1.81
PTCD1O75127 MICF-203ENST00000432679 129 ntBASIC3.72□□□□□ -1.81
PTCD1O75127 HMGN2P18-201ENST00000450680 270 ntBASIC3.72□□□□□ -1.81
PTCD1O75127 RNU6-498P-201ENST00000459468 107 ntBASIC3.72□□□□□ -1.81
PTCD1O75127 SNORA64.4-201ENST00000516632 81 ntBASIC3.72□□□□□ -1.81
PTCD1O75127 AC025647.1-201ENST00000517879 253 ntBASIC3.72□□□□□ -1.81
PTCD1O75127 AP003357.1-201ENST00000604497 148 ntBASIC3.72□□□□□ -1.81
PTCD1O75127 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
PTCD1O75127 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.72□□□□□ -1.81
PTCD1O75127 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.72□□□□□ -1.81
PTCD1O75127 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
PTCD1O75127 AC138915.1-201ENST00000565427 1685 ntBASIC3.71□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms