Protein–RNA interactions for Protein: O43638

FOXS1, Forkhead box protein S1, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXS1O43638 RNU6-1336P-201ENST00000383886 109 ntBASIC2.65□□□□□ -1.99
FOXS1O43638 RNU6-1235P-201ENST00000384559 107 ntBASIC2.65□□□□□ -1.99
FOXS1O43638 AC008134.1-201ENST00000420943 193 ntBASIC2.65□□□□□ -1.99
FOXS1O43638 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.65□□□□□ -1.99
FOXS1O43638 AC105272.1-201ENST00000438604 198 ntBASIC2.65□□□□□ -1.99
FOXS1O43638 RNU6-498P-201ENST00000459468 107 ntBASIC2.65□□□□□ -1.99
FOXS1O43638 RNU6-1299P-201ENST00000516316 100 ntBASIC2.65□□□□□ -1.99
FOXS1O43638 GTF3AP2-201ENST00000557014 266 ntBASIC2.65□□□□□ -1.99
FOXS1O43638 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.65□□□□□ -1.99
FOXS1O43638 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.65□□□□□ -1.99
FOXS1O43638 AL391516.1-201ENST00000554380 2449 ntBASIC2.64□□□□□ -1.99
FOXS1O43638 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
FOXS1O43638 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
FOXS1O43638 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
FOXS1O43638 AC008264.2-201ENST00000610193 3731 ntBASIC2.64□□□□□ -1.99
FOXS1O43638 RNU6-235P-201ENST00000362644 107 ntBASIC2.64□□□□□ -1.99
FOXS1O43638 SNORA63.4-201ENST00000362763 126 ntBASIC2.64□□□□□ -1.99
FOXS1O43638 Y_RNA.120-201ENST00000363304 110 ntBASIC2.64□□□□□ -1.99
FOXS1O43638 RNU4-13P-201ENST00000364019 141 ntBASIC2.64□□□□□ -1.99
FOXS1O43638 RNU1-112P-201ENST00000364401 164 ntBASIC2.64□□□□□ -1.99
FOXS1O43638 Y_RNA.280-201ENST00000364765 112 ntBASIC2.64□□□□□ -1.99
FOXS1O43638 RNU6-1080P-201ENST00000383982 107 ntBASIC2.64□□□□□ -1.99
FOXS1O43638 MIR181A2-201ENST00000384863 110 ntBASIC2.64□□□□□ -1.99
FOXS1O43638 AC016909.1-201ENST00000415916 166 ntBASIC2.64□□□□□ -1.99
FOXS1O43638 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.64□□□□□ -1.99
FOXS1O43638 RPL30P4-201ENST00000429309 333 ntBASIC2.64□□□□□ -1.99
FOXS1O43638 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.64□□□□□ -1.99
FOXS1O43638 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.64□□□□□ -1.99
FOXS1O43638 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.64□□□□□ -1.99
FOXS1O43638 SCARNA17.1-201ENST00000516211 143 ntBASIC2.64□□□□□ -1.99
FOXS1O43638 SCARNA17.2-201ENST00000516334 143 ntBASIC2.64□□□□□ -1.99
FOXS1O43638 RNA5SP153-201ENST00000516498 76 ntBASIC2.64□□□□□ -1.99
FOXS1O43638 Y_RNA.692-201ENST00000516627 105 ntBASIC2.64□□□□□ -1.99
FOXS1O43638 Y_RNA.709-201ENST00000516952 92 ntBASIC2.64□□□□□ -1.99
FOXS1O43638 RNU6-586P-201ENST00000517265 104 ntBASIC2.64□□□□□ -1.99
FOXS1O43638 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
FOXS1O43638 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.64□□□□□ -1.99
FOXS1O43638 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.64□□□□□ -1.99
FOXS1O43638 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.64□□□□□ -1.99
FOXS1O43638 AL049861.1-201ENST00000603130 150 ntBASIC2.64□□□□□ -1.99
FOXS1O43638 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
FOXS1O43638 SCARNA17.4-201ENST00000614296 143 ntBASIC2.64□□□□□ -1.99
FOXS1O43638 MIR6129-201ENST00000616087 109 ntBASIC2.64□□□□□ -1.99
FOXS1O43638 SNORA50A-202ENST00000629536 136 ntBASIC2.64□□□□□ -1.99
FOXS1O43638 MIR3914-2-201ENST00000637339 95 ntBASIC2.64□□□□□ -1.99
FOXS1O43638 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
FOXS1O43638 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.63□□□□□ -1.99
FOXS1O43638 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
FOXS1O43638 RNU6-1240P-201ENST00000365155 104 ntBASIC2.63□□□□□ -1.99
FOXS1O43638 RNU6-418P-201ENST00000384035 107 ntBASIC2.63□□□□□ -1.99
FOXS1O43638 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
FOXS1O43638 AL138827.1-201ENST00000402666 306 ntBASIC2.63□□□□□ -1.99
FOXS1O43638 AL590004.2-201ENST00000404787 371 ntBASIC2.63□□□□□ -1.99
FOXS1O43638 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.63□□□□□ -1.99
FOXS1O43638 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.63□□□□□ -1.99
FOXS1O43638 AC090515.1-201ENST00000465295 476 ntBASIC2.63□□□□□ -1.99
FOXS1O43638 RNA5SP356-201ENST00000515972 94 ntBASIC2.63□□□□□ -1.99
FOXS1O43638 SNORD77.4-201ENST00000516158 81 ntBASIC2.63□□□□□ -1.99
FOXS1O43638 RNU2-34P-201ENST00000516534 121 ntBASIC2.63□□□□□ -1.99
FOXS1O43638 SCARNA11.3-201ENST00000517276 130 ntBASIC2.63□□□□□ -1.99
FOXS1O43638 MIR4474-201ENST00000579189 78 ntBASIC2.63□□□□□ -1.99
FOXS1O43638 AL929325.1-201ENST00000603096 117 ntBASIC2.63□□□□□ -1.99
FOXS1O43638 AC097639.2-201ENST00000603159 172 ntBASIC2.63□□□□□ -1.99
FOXS1O43638 AC107294.3-201ENST00000609211 526 ntBASIC2.63□□□□□ -1.99
FOXS1O43638 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
FOXS1O43638 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.63□□□□□ -1.99
FOXS1O43638 AC091564.4-201ENST00000533934 2194 ntBASIC2.63□□□□□ -1.99
FOXS1O43638 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
FOXS1O43638 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.62□□□□□ -1.99
FOXS1O43638 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.62□□□□□ -1.99
FOXS1O43638 U8.1-201ENST00000362843 134 ntBASIC2.62□□□□□ -1.99
FOXS1O43638 Y_RNA.203-201ENST00000364106 102 ntBASIC2.62□□□□□ -1.99
FOXS1O43638 AC009969.1-201ENST00000438726 172 ntBASIC2.62□□□□□ -1.99
FOXS1O43638 AL158147.1-201ENST00000443970 75 ntBASIC2.62□□□□□ -1.99
FOXS1O43638 AC245102.2-201ENST00000448956 180 ntBASIC2.62□□□□□ -1.99
FOXS1O43638 AC003982.1-202ENST00000469928 248 ntBASIC2.62□□□□□ -1.99
FOXS1O43638 RPS27P22-201ENST00000478056 241 ntBASIC2.62□□□□□ -1.99
FOXS1O43638 CYCTP-201ENST00000504253 315 ntBASIC2.62□□□□□ -1.99
FOXS1O43638 MRPS36P2-201ENST00000512569 299 ntBASIC2.62□□□□□ -1.99
FOXS1O43638 RNU6-772P-201ENST00000516042 105 ntBASIC2.62□□□□□ -1.99
FOXS1O43638 MIR3121-201ENST00000579680 77 ntBASIC2.62□□□□□ -1.99
FOXS1O43638 MIR2681-201ENST00000581814 105 ntBASIC2.62□□□□□ -1.99
FOXS1O43638 AC131055.1-201ENST00000584626 316 ntBASIC2.62□□□□□ -1.99
FOXS1O43638 ZNF861P-201ENST00000588126 639 ntBASIC2.62□□□□□ -1.99
FOXS1O43638 AC013412.1-201ENST00000610687 192 ntBASIC2.62□□□□□ -1.99
FOXS1O43638 uc_338.4-201ENST00000616635 176 ntBASIC2.62□□□□□ -1.99
FOXS1O43638 U6.95-201ENST00000636931 70 ntBASIC2.62□□□□□ -1.99
FOXS1O43638 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC2.62□□□□□ -1.99
FOXS1O43638 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.62□□□□□ -1.99
FOXS1O43638 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
FOXS1O43638 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
FOXS1O43638 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
FOXS1O43638 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC2.61□□□□□ -1.99
FOXS1O43638 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.61□□□□□ -1.99
FOXS1O43638 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.61□□□□□ -1.99
FOXS1O43638 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC2.61□□□□□ -1.99
FOXS1O43638 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
FOXS1O43638 RNU1-22P-201ENST00000363334 158 ntBASIC2.61□□□□□ -1.99
FOXS1O43638 SNORA5B-201ENST00000363786 132 ntBASIC2.61□□□□□ -1.99
FOXS1O43638 RNU6-755P-201ENST00000364400 103 ntBASIC2.61□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 146 ms