Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.94□□□□□ -1.78
RCCD1A6NED2 MIR4474-201ENST00000579189 78 ntBASIC3.94□□□□□ -1.78
RCCD1A6NED2 AL356280.1-201ENST00000603614 379 ntBASIC3.94□□□□□ -1.78
RCCD1A6NED2 MIR6500-201ENST00000622700 86 ntBASIC3.94□□□□□ -1.78
RCCD1A6NED2 AC091932.4-201ENST00000623386 200 ntBASIC3.94□□□□□ -1.78
RCCD1A6NED2 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
RCCD1A6NED2 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
RCCD1A6NED2 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
RCCD1A6NED2 SPRR2C-201ENST00000290702 219 ntBASIC3.93□□□□□ -1.78
RCCD1A6NED2 RNA5SP139-201ENST00000364340 117 ntBASIC3.93□□□□□ -1.78
RCCD1A6NED2 RNU1-13P-201ENST00000384499 162 ntBASIC3.93□□□□□ -1.78
RCCD1A6NED2 SNORA8-201ENST00000384574 139 ntBASIC3.93□□□□□ -1.78
RCCD1A6NED2 AL627390.1-201ENST00000396055 340 ntBASIC3.93□□□□□ -1.78
RCCD1A6NED2 RNU2-48P-201ENST00000410694 191 ntBASIC3.93□□□□□ -1.78
RCCD1A6NED2 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC3.93□□□□□ -1.78
RCCD1A6NED2 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.93□□□□□ -1.78
RCCD1A6NED2 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.93□□□□□ -1.78
RCCD1A6NED2 SNORD45.4-201ENST00000516629 73 ntBASIC3.93□□□□□ -1.78
RCCD1A6NED2 NDUFB9P3-201ENST00000521269 501 ntBASIC3.93□□□□□ -1.78
RCCD1A6NED2 MIR3202-2-201ENST00000635980 79 ntBASIC3.93□□□□□ -1.78
RCCD1A6NED2 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
RCCD1A6NED2 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
RCCD1A6NED2 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
RCCD1A6NED2 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.92□□□□□ -1.78
RCCD1A6NED2 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.92□□□□□ -1.78
RCCD1A6NED2 SNORA33-201ENST00000363664 130 ntBASIC3.92□□□□□ -1.78
RCCD1A6NED2 RNA5SP387-201ENST00000364226 106 ntBASIC3.92□□□□□ -1.78
RCCD1A6NED2 Y_RNA.290-201ENST00000364879 114 ntBASIC3.92□□□□□ -1.78
RCCD1A6NED2 MIR184-201ENST00000384962 84 ntBASIC3.92□□□□□ -1.78
RCCD1A6NED2 RNU6-628P-201ENST00000410675 107 ntBASIC3.92□□□□□ -1.78
RCCD1A6NED2 SNORA57.3-201ENST00000411095 141 ntBASIC3.92□□□□□ -1.78
RCCD1A6NED2 AC024995.1-201ENST00000523014 93 ntBASIC3.92□□□□□ -1.78
RCCD1A6NED2 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.92□□□□□ -1.78
RCCD1A6NED2 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
RCCD1A6NED2 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
RCCD1A6NED2 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
RCCD1A6NED2 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC3.91□□□□□ -1.78
RCCD1A6NED2 RNA5SP97-201ENST00000365006 84 ntBASIC3.91□□□□□ -1.78
RCCD1A6NED2 RNU6-1124P-201ENST00000384169 107 ntBASIC3.91□□□□□ -1.78
RCCD1A6NED2 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
RCCD1A6NED2 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
RCCD1A6NED2 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
RCCD1A6NED2 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.91□□□□□ -1.78
RCCD1A6NED2 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.91□□□□□ -1.78
RCCD1A6NED2 RNVU1-4-201ENST00000612985 164 ntBASIC3.91□□□□□ -1.78
RCCD1A6NED2 IGLL4P-201ENST00000614590 133 ntBASIC3.91□□□□□ -1.78
RCCD1A6NED2 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.91□□□□□ -1.78
RCCD1A6NED2 AC012442.3-202ENST00000636742 206 ntBASIC3.91□□□□□ -1.78
RCCD1A6NED2 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.91□□□□□ -1.78
RCCD1A6NED2 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
RCCD1A6NED2 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.78
RCCD1A6NED2 CEP170P1-201ENST00000502249 4587 ntBASIC3.9□□□□□ -1.78
RCCD1A6NED2 AC008264.2-201ENST00000610193 3731 ntBASIC3.9□□□□□ -1.78
RCCD1A6NED2 RNU6-228P-201ENST00000362700 106 ntBASIC3.9□□□□□ -1.79
RCCD1A6NED2 RNY1P1-201ENST00000364372 112 ntBASIC3.9□□□□□ -1.79
RCCD1A6NED2 Y_RNA.531-201ENST00000384589 121 ntBASIC3.9□□□□□ -1.79
RCCD1A6NED2 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.9□□□□□ -1.79
RCCD1A6NED2 RNU2-63P-201ENST00000410792 194 ntBASIC3.9□□□□□ -1.79
RCCD1A6NED2 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.9□□□□□ -1.79
RCCD1A6NED2 GOT2P5-201ENST00000433995 546 ntBASIC3.9□□□□□ -1.79
RCCD1A6NED2 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.9□□□□□ -1.79
RCCD1A6NED2 RNA5SP57-201ENST00000459463 123 ntBASIC3.9□□□□□ -1.79
RCCD1A6NED2 AC113410.1-201ENST00000505029 247 ntBASIC3.9□□□□□ -1.79
RCCD1A6NED2 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.9□□□□□ -1.79
RCCD1A6NED2 AC078899.2-201ENST00000595282 212 ntBASIC3.9□□□□□ -1.79
RCCD1A6NED2 RNA5SP196-201ENST00000625967 102 ntBASIC3.9□□□□□ -1.79
RCCD1A6NED2 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
RCCD1A6NED2 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC3.9□□□□□ -1.79
RCCD1A6NED2 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC3.9□□□□□ -1.79
RCCD1A6NED2 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.9□□□□□ -1.79
RCCD1A6NED2 MIR372-201ENST00000362225 67 ntBASIC3.89□□□□□ -1.79
RCCD1A6NED2 SNORA80E-201ENST00000384744 137 ntBASIC3.89□□□□□ -1.79
RCCD1A6NED2 AC096949.1-201ENST00000412047 152 ntBASIC3.89□□□□□ -1.79
RCCD1A6NED2 AL445687.1-201ENST00000439946 251 ntBASIC3.89□□□□□ -1.79
RCCD1A6NED2 RN7SL636P-201ENST00000497504 294 ntBASIC3.89□□□□□ -1.79
RCCD1A6NED2 RNU7-61P-201ENST00000515897 61 ntBASIC3.89□□□□□ -1.79
RCCD1A6NED2 MIR4694-201ENST00000578534 80 ntBASIC3.89□□□□□ -1.79
RCCD1A6NED2 MIR4425-201ENST00000580572 84 ntBASIC3.89□□□□□ -1.79
RCCD1A6NED2 AC087741.2-201ENST00000619415 172 ntBASIC3.89□□□□□ -1.79
RCCD1A6NED2 CTSLP2-204ENST00000629029 392 ntBASIC3.89□□□□□ -1.79
RCCD1A6NED2 MAPK10-373ENST00000641983 6772 ntBASIC3.89□□□□□ -1.79
RCCD1A6NED2 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.89□□□□□ -1.79
RCCD1A6NED2 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
RCCD1A6NED2 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.88□□□□□ -1.79
RCCD1A6NED2 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
RCCD1A6NED2 MIR30E-201ENST00000362104 92 ntBASIC3.88□□□□□ -1.79
RCCD1A6NED2 RNU6-661P-201ENST00000362409 107 ntBASIC3.88□□□□□ -1.79
RCCD1A6NED2 RNU4-16P-201ENST00000364737 141 ntBASIC3.88□□□□□ -1.79
RCCD1A6NED2 MIR561-201ENST00000385216 97 ntBASIC3.88□□□□□ -1.79
RCCD1A6NED2 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
RCCD1A6NED2 AL162151.2-201ENST00000448875 158 ntBASIC3.88□□□□□ -1.79
RCCD1A6NED2 ATP5J2P3-201ENST00000451550 258 ntBASIC3.88□□□□□ -1.79
RCCD1A6NED2 HMGN2P7-201ENST00000456186 273 ntBASIC3.88□□□□□ -1.79
RCCD1A6NED2 U3.44-201ENST00000458938 192 ntBASIC3.88□□□□□ -1.79
RCCD1A6NED2 AC022137.1-201ENST00000483735 151 ntBASIC3.88□□□□□ -1.79
RCCD1A6NED2 SEM1P1-201ENST00000506694 209 ntBASIC3.88□□□□□ -1.79
RCCD1A6NED2 AC026402.1-201ENST00000513642 170 ntBASIC3.88□□□□□ -1.79
RCCD1A6NED2 SNORD59.2-201ENST00000516873 68 ntBASIC3.88□□□□□ -1.79
RCCD1A6NED2 IGHVII-40-1-201ENST00000517316 58 ntBASIC3.88□□□□□ -1.79
RCCD1A6NED2 HSPE1P19-201ENST00000603327 295 ntBASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms