Protein–RNA interactions for Protein: Q9HCC9

ZFYVE28, Lateral signaling target protein 2 homolog, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28Q9HCC9 RNA5SP496-201ENST00000391240 109 ntBASIC3.51□□□□□ -1.85
ZFYVE28Q9HCC9 AL512604.1-201ENST00000404812 257 ntBASIC3.51□□□□□ -1.85
ZFYVE28Q9HCC9 RNU6-735P-201ENST00000410612 107 ntBASIC3.51□□□□□ -1.85
ZFYVE28Q9HCC9 RNU4-43P-201ENST00000410628 137 ntBASIC3.51□□□□□ -1.85
ZFYVE28Q9HCC9 CKS1BP2-201ENST00000497342 240 ntBASIC3.51□□□□□ -1.85
ZFYVE28Q9HCC9 RNU6-63P-201ENST00000516690 95 ntBASIC3.51□□□□□ -1.85
ZFYVE28Q9HCC9 AC012640.5-201ENST00000623897 319 ntBASIC3.51□□□□□ -1.85
ZFYVE28Q9HCC9 MIR1248-201ENST00000629190 106 ntBASIC3.51□□□□□ -1.85
ZFYVE28Q9HCC9 SNORA50A-202ENST00000629536 136 ntBASIC3.51□□□□□ -1.85
ZFYVE28Q9HCC9 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
ZFYVE28Q9HCC9 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.51□□□□□ -1.85
ZFYVE28Q9HCC9 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.51□□□□□ -1.85
ZFYVE28Q9HCC9 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
ZFYVE28Q9HCC9 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
ZFYVE28Q9HCC9 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
ZFYVE28Q9HCC9 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
ZFYVE28Q9HCC9 MIR539-201ENST00000365690 78 ntBASIC3.5□□□□□ -1.85
ZFYVE28Q9HCC9 SNORA20-201ENST00000384662 132 ntBASIC3.5□□□□□ -1.85
ZFYVE28Q9HCC9 SNORA79-201ENST00000408376 140 ntBASIC3.5□□□□□ -1.85
ZFYVE28Q9HCC9 RNU2-32P-201ENST00000411193 191 ntBASIC3.5□□□□□ -1.85
ZFYVE28Q9HCC9 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC3.5□□□□□ -1.85
ZFYVE28Q9HCC9 AC009969.1-201ENST00000438726 172 ntBASIC3.5□□□□□ -1.85
ZFYVE28Q9HCC9 RPL23AP58-201ENST00000440453 469 ntBASIC3.5□□□□□ -1.85
ZFYVE28Q9HCC9 RPS27P1-201ENST00000450552 247 ntBASIC3.5□□□□□ -1.85
ZFYVE28Q9HCC9 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC3.5□□□□□ -1.85
ZFYVE28Q9HCC9 CYP2C59P-201ENST00000457790 269 ntBASIC3.5□□□□□ -1.85
ZFYVE28Q9HCC9 AC010531.2-201ENST00000465012 153 ntBASIC3.5□□□□□ -1.85
ZFYVE28Q9HCC9 RPS27P22-201ENST00000478056 241 ntBASIC3.5□□□□□ -1.85
ZFYVE28Q9HCC9 TRBV12-1-201ENST00000479785 344 ntBASIC3.5□□□□□ -1.85
ZFYVE28Q9HCC9 RNA5SP490-201ENST00000517141 136 ntBASIC3.5□□□□□ -1.85
ZFYVE28Q9HCC9 AC091544.4-201ENST00000555268 342 ntBASIC3.5□□□□□ -1.85
ZFYVE28Q9HCC9 AC105245.1-201ENST00000581934 244 ntBASIC3.5□□□□□ -1.85
ZFYVE28Q9HCC9 MIR7153-201ENST00000637758 57 ntBASIC3.5□□□□□ -1.85
ZFYVE28Q9HCC9 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
ZFYVE28Q9HCC9 AL355596.1-201ENST00000565399 3996 ntBASIC3.5□□□□□ -1.85
ZFYVE28Q9HCC9 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
ZFYVE28Q9HCC9 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
ZFYVE28Q9HCC9 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
ZFYVE28Q9HCC9 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
ZFYVE28Q9HCC9 PWAR6-201ENST00000552334 4618 ntBASIC3.49□□□□□ -1.85
ZFYVE28Q9HCC9 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.49□□□□□ -1.85
ZFYVE28Q9HCC9 RNU6-674P-201ENST00000363831 107 ntBASIC3.49□□□□□ -1.85
ZFYVE28Q9HCC9 RNU4-41P-201ENST00000364426 143 ntBASIC3.49□□□□□ -1.85
ZFYVE28Q9HCC9 RNA5SP511-201ENST00000410487 115 ntBASIC3.49□□□□□ -1.85
ZFYVE28Q9HCC9 Y_RNA.622-201ENST00000411091 108 ntBASIC3.49□□□□□ -1.85
ZFYVE28Q9HCC9 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC3.49□□□□□ -1.85
ZFYVE28Q9HCC9 RNU6-971P-201ENST00000516920 106 ntBASIC3.49□□□□□ -1.85
ZFYVE28Q9HCC9 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.49□□□□□ -1.85
ZFYVE28Q9HCC9 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.49□□□□□ -1.85
ZFYVE28Q9HCC9 TUG1_4.1-201ENST00000619464 181 ntBASIC3.49□□□□□ -1.85
ZFYVE28Q9HCC9 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
ZFYVE28Q9HCC9 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
ZFYVE28Q9HCC9 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.49□□□□□ -1.85
ZFYVE28Q9HCC9 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.49□□□□□ -1.85
ZFYVE28Q9HCC9 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
ZFYVE28Q9HCC9 CENPCP1-201ENST00000533085 2578 ntBASIC3.48□□□□□ -1.85
ZFYVE28Q9HCC9 Y_RNA.420-201ENST00000384043 110 ntBASIC3.48□□□□□ -1.85
ZFYVE28Q9HCC9 RNU6-768P-201ENST00000384683 107 ntBASIC3.48□□□□□ -1.85
ZFYVE28Q9HCC9 Y_RNA.587-201ENST00000391210 103 ntBASIC3.48□□□□□ -1.85
ZFYVE28Q9HCC9 MIR1278-201ENST00000408753 81 ntBASIC3.48□□□□□ -1.85
ZFYVE28Q9HCC9 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
ZFYVE28Q9HCC9 AL161788.1-201ENST00000441805 169 ntBASIC3.48□□□□□ -1.85
ZFYVE28Q9HCC9 SNRPGP8-201ENST00000454064 226 ntBASIC3.48□□□□□ -1.85
ZFYVE28Q9HCC9 RNU6-1211P-201ENST00000459179 105 ntBASIC3.48□□□□□ -1.85
ZFYVE28Q9HCC9 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC3.48□□□□□ -1.85
ZFYVE28Q9HCC9 YWHAEP4-201ENST00000505390 198 ntBASIC3.48□□□□□ -1.85
ZFYVE28Q9HCC9 AC107016.2-201ENST00000547968 190 ntBASIC3.48□□□□□ -1.85
ZFYVE28Q9HCC9 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.48□□□□□ -1.85
ZFYVE28Q9HCC9 ZNF702P-202ENST00000434269 1966 ntBASIC3.48□□□□□ -1.85
ZFYVE28Q9HCC9 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.48□□□□□ -1.85
ZFYVE28Q9HCC9 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
ZFYVE28Q9HCC9 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
ZFYVE28Q9HCC9 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.47□□□□□ -1.85
ZFYVE28Q9HCC9 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
ZFYVE28Q9HCC9 SNORA68.1-201ENST00000364537 132 ntBASIC3.47□□□□□ -1.85
ZFYVE28Q9HCC9 Y_RNA.393-201ENST00000383936 102 ntBASIC3.47□□□□□ -1.85
ZFYVE28Q9HCC9 Y_RNA.542-201ENST00000384641 111 ntBASIC3.47□□□□□ -1.85
ZFYVE28Q9HCC9 FO393413.1-201ENST00000402892 195 ntBASIC3.47□□□□□ -1.85
ZFYVE28Q9HCC9 Y_RNA.629-201ENST00000411368 105 ntBASIC3.47□□□□□ -1.85
ZFYVE28Q9HCC9 RN7SKP101-201ENST00000411376 320 ntBASIC3.47□□□□□ -1.85
ZFYVE28Q9HCC9 AC087499.2-201ENST00000432861 149 ntBASIC3.47□□□□□ -1.85
ZFYVE28Q9HCC9 AC006539.3-201ENST00000454258 129 ntBASIC3.47□□□□□ -1.85
ZFYVE28Q9HCC9 AC080013.2-201ENST00000460866 323 ntBASIC3.47□□□□□ -1.85
ZFYVE28Q9HCC9 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC3.47□□□□□ -1.85
ZFYVE28Q9HCC9 AC015720.1-201ENST00000565251 277 ntBASIC3.47□□□□□ -1.85
ZFYVE28Q9HCC9 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.47□□□□□ -1.85
ZFYVE28Q9HCC9 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
ZFYVE28Q9HCC9 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
ZFYVE28Q9HCC9 AC080128.1-201ENST00000474389 1917 ntBASIC3.46□□□□□ -1.85
ZFYVE28Q9HCC9 RNU6-117P-201ENST00000365415 107 ntBASIC3.46□□□□□ -1.86
ZFYVE28Q9HCC9 SNORA72-201ENST00000384339 132 ntBASIC3.46□□□□□ -1.86
ZFYVE28Q9HCC9 RNU6-136P-201ENST00000384663 107 ntBASIC3.46□□□□□ -1.86
ZFYVE28Q9HCC9 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
ZFYVE28Q9HCC9 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC3.46□□□□□ -1.86
ZFYVE28Q9HCC9 SNORA4.4-201ENST00000515921 135 ntBASIC3.46□□□□□ -1.86
ZFYVE28Q9HCC9 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.46□□□□□ -1.86
ZFYVE28Q9HCC9 AL031274.2-201ENST00000599419 203 ntBASIC3.46□□□□□ -1.86
ZFYVE28Q9HCC9 AC090115.4-201ENST00000609970 188 ntBASIC3.46□□□□□ -1.86
ZFYVE28Q9HCC9 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
ZFYVE28Q9HCC9 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms