Protein–RNA interactions for Protein: Q96JQ5

MS4A4A, Membrane-spanning 4-domains subfamily A member 4A, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4AQ96JQ5 Z83843.1-201ENST00000604070 3685 ntBASIC4.44□□□□□ -1.7
MS4A4AQ96JQ5 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
MS4A4AQ96JQ5 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
MS4A4AQ96JQ5 RNU6-652P-201ENST00000365488 107 ntBASIC4.44□□□□□ -1.7
MS4A4AQ96JQ5 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
MS4A4AQ96JQ5 AL133412.1-201ENST00000380194 2992 ntBASIC4.44□□□□□ -1.7
MS4A4AQ96JQ5 Y_RNA.430-201ENST00000384081 110 ntBASIC4.44□□□□□ -1.7
MS4A4AQ96JQ5 SNORA8-201ENST00000384574 139 ntBASIC4.44□□□□□ -1.7
MS4A4AQ96JQ5 RNY1P4-201ENST00000384595 115 ntBASIC4.44□□□□□ -1.7
MS4A4AQ96JQ5 RNA5SP482-201ENST00000391269 118 ntBASIC4.44□□□□□ -1.7
MS4A4AQ96JQ5 SNORA3C-201ENST00000408792 125 ntBASIC4.44□□□□□ -1.7
MS4A4AQ96JQ5 MICF-203ENST00000432679 129 ntBASIC4.44□□□□□ -1.7
MS4A4AQ96JQ5 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC4.44□□□□□ -1.7
MS4A4AQ96JQ5 RNU6-513P-201ENST00000516104 104 ntBASIC4.44□□□□□ -1.7
MS4A4AQ96JQ5 RNU6-1041P-201ENST00000516254 102 ntBASIC4.44□□□□□ -1.7
MS4A4AQ96JQ5 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC4.44□□□□□ -1.7
MS4A4AQ96JQ5 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC4.44□□□□□ -1.7
MS4A4AQ96JQ5 MIR3936-201ENST00000584304 110 ntBASIC4.44□□□□□ -1.7
MS4A4AQ96JQ5 AC002984.1-201ENST00000591692 448 ntBASIC4.44□□□□□ -1.7
MS4A4AQ96JQ5 HNRNPDLP4-201ENST00000605144 301 ntBASIC4.44□□□□□ -1.7
MS4A4AQ96JQ5 CTSLP2-204ENST00000629029 392 ntBASIC4.44□□□□□ -1.7
MS4A4AQ96JQ5 AC006160.2-201ENST00000637708 154 ntBASIC4.44□□□□□ -1.7
MS4A4AQ96JQ5 U6.108-201ENST00000637764 58 ntBASIC4.44□□□□□ -1.7
MS4A4AQ96JQ5 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
MS4A4AQ96JQ5 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
MS4A4AQ96JQ5 ZNF962P-201ENST00000443465 3140 ntBASIC4.43□□□□□ -1.7
MS4A4AQ96JQ5 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
MS4A4AQ96JQ5 SNORA48.2-201ENST00000390926 124 ntBASIC4.43□□□□□ -1.7
MS4A4AQ96JQ5 MIR1251-201ENST00000408552 70 ntBASIC4.43□□□□□ -1.7
MS4A4AQ96JQ5 RNU6-998P-201ENST00000515894 101 ntBASIC4.43□□□□□ -1.7
MS4A4AQ96JQ5 RN7SKP46-201ENST00000515942 234 ntBASIC4.43□□□□□ -1.7
MS4A4AQ96JQ5 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.43□□□□□ -1.7
MS4A4AQ96JQ5 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
MS4A4AQ96JQ5 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
MS4A4AQ96JQ5 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
MS4A4AQ96JQ5 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
MS4A4AQ96JQ5 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
MS4A4AQ96JQ5 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
MS4A4AQ96JQ5 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
MS4A4AQ96JQ5 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.43□□□□□ -1.7
MS4A4AQ96JQ5 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
MS4A4AQ96JQ5 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
MS4A4AQ96JQ5 MIR340-201ENST00000362125 95 ntBASIC4.42□□□□□ -1.7
MS4A4AQ96JQ5 Y_RNA.467-201ENST00000384297 102 ntBASIC4.42□□□□□ -1.7
MS4A4AQ96JQ5 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
MS4A4AQ96JQ5 RNU6-1077P-201ENST00000410506 102 ntBASIC4.42□□□□□ -1.7
MS4A4AQ96JQ5 CYCSP4-201ENST00000429682 331 ntBASIC4.42□□□□□ -1.7
MS4A4AQ96JQ5 SNORA71B-202ENST00000439232 272 ntBASIC4.42□□□□□ -1.7
MS4A4AQ96JQ5 AL353813.1-201ENST00000440700 253 ntBASIC4.42□□□□□ -1.7
MS4A4AQ96JQ5 RNU7-113P-201ENST00000459273 62 ntBASIC4.42□□□□□ -1.7
MS4A4AQ96JQ5 SCARNA17.1-201ENST00000516211 143 ntBASIC4.42□□□□□ -1.7
MS4A4AQ96JQ5 SCARNA17.2-201ENST00000516334 143 ntBASIC4.42□□□□□ -1.7
MS4A4AQ96JQ5 RNA5SP164-201ENST00000516533 110 ntBASIC4.42□□□□□ -1.7
MS4A4AQ96JQ5 RNU7-28P-201ENST00000516759 62 ntBASIC4.42□□□□□ -1.7
MS4A4AQ96JQ5 SCARNA17.4-201ENST00000614296 143 ntBASIC4.42□□□□□ -1.7
MS4A4AQ96JQ5 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.42□□□□□ -1.7
MS4A4AQ96JQ5 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.42□□□□□ -1.7
MS4A4AQ96JQ5 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
MS4A4AQ96JQ5 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
MS4A4AQ96JQ5 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
MS4A4AQ96JQ5 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
MS4A4AQ96JQ5 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
MS4A4AQ96JQ5 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.41□□□□□ -1.7
MS4A4AQ96JQ5 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.41□□□□□ -1.7
MS4A4AQ96JQ5 Y_RNA.4-201ENST00000362333 112 ntBASIC4.41□□□□□ -1.7
MS4A4AQ96JQ5 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
MS4A4AQ96JQ5 SNORD58A-201ENST00000383875 65 ntBASIC4.41□□□□□ -1.7
MS4A4AQ96JQ5 AL512310.12-203ENST00000640543 90 ntBASIC4.41□□□□□ -1.7
MS4A4AQ96JQ5 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.41□□□□□ -1.7
MS4A4AQ96JQ5 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.41□□□□□ -1.7
MS4A4AQ96JQ5 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
MS4A4AQ96JQ5 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.41□□□□□ -1.7
MS4A4AQ96JQ5 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.41□□□□□ -1.7
MS4A4AQ96JQ5 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
MS4A4AQ96JQ5 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
MS4A4AQ96JQ5 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
MS4A4AQ96JQ5 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
MS4A4AQ96JQ5 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
MS4A4AQ96JQ5 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
MS4A4AQ96JQ5 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.7
MS4A4AQ96JQ5 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.7
MS4A4AQ96JQ5 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
MS4A4AQ96JQ5 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.4□□□□□ -1.71
MS4A4AQ96JQ5 Y_RNA.241-201ENST00000364470 117 ntBASIC4.4□□□□□ -1.71
MS4A4AQ96JQ5 SNORD105B-201ENST00000458770 79 ntBASIC4.4□□□□□ -1.71
MS4A4AQ96JQ5 RNA5SP103-201ENST00000459503 118 ntBASIC4.4□□□□□ -1.71
MS4A4AQ96JQ5 RN7SL601P-201ENST00000471221 293 ntBASIC4.4□□□□□ -1.71
MS4A4AQ96JQ5 RNU6-1006P-201ENST00000516998 103 ntBASIC4.4□□□□□ -1.71
MS4A4AQ96JQ5 AC069240.1-201ENST00000548774 375 ntBASIC4.4□□□□□ -1.71
MS4A4AQ96JQ5 ZNF861P-201ENST00000588126 639 ntBASIC4.4□□□□□ -1.71
MS4A4AQ96JQ5 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC4.4□□□□□ -1.71
MS4A4AQ96JQ5 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
MS4A4AQ96JQ5 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
MS4A4AQ96JQ5 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.4□□□□□ -1.71
MS4A4AQ96JQ5 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC4.4□□□□□ -1.71
MS4A4AQ96JQ5 AC091564.4-201ENST00000533934 2194 ntBASIC4.4□□□□□ -1.71
MS4A4AQ96JQ5 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC4.4□□□□□ -1.71
MS4A4AQ96JQ5 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.39□□□□□ -1.71
MS4A4AQ96JQ5 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
MS4A4AQ96JQ5 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 113.1 ms