Protein–RNA interactions for Protein: Q96BD8

SKA1, Spindle and kinetochore-associated protein 1, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1Q96BD8 AC073413.2-201ENST00000604332 360 ntBASIC1.72□□□□□ -2.13
SKA1Q96BD8 AC080078.3-201ENST00000605407 463 ntBASIC1.72□□□□□ -2.13
SKA1Q96BD8 AC025253.1-201ENST00000613623 543 ntBASIC1.72□□□□□ -2.13
SKA1Q96BD8 AC133104.2-201ENST00000615272 193 ntBASIC1.72□□□□□ -2.13
SKA1Q96BD8 AC006026.1-201ENST00000444025 1803 ntBASIC1.71□□□□□ -2.14
SKA1Q96BD8 MIR410-201ENST00000362222 80 ntBASIC1.71□□□□□ -2.14
SKA1Q96BD8 RNU6-1310P-201ENST00000384153 107 ntBASIC1.71□□□□□ -2.14
SKA1Q96BD8 MIR562-201ENST00000384894 95 ntBASIC1.71□□□□□ -2.14
SKA1Q96BD8 SNORA75.6-201ENST00000391318 127 ntBASIC1.71□□□□□ -2.14
SKA1Q96BD8 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.71□□□□□ -2.14
SKA1Q96BD8 SNORA40.9-201ENST00000515895 93 ntBASIC1.71□□□□□ -2.14
SKA1Q96BD8 RNU7-172P-201ENST00000517125 64 ntBASIC1.71□□□□□ -2.14
SKA1Q96BD8 SUB1P3-201ENST00000564581 315 ntBASIC1.71□□□□□ -2.14
SKA1Q96BD8 SNORD53B-201ENST00000577887 78 ntBASIC1.71□□□□□ -2.14
SKA1Q96BD8 AL512598.1-201ENST00000610158 273 ntBASIC1.71□□□□□ -2.14
SKA1Q96BD8 MIR3674-201ENST00000636576 68 ntBASIC1.71□□□□□ -2.14
SKA1Q96BD8 AC099654.14-201ENST00000638599 341 ntBASIC1.71□□□□□ -2.14
SKA1Q96BD8 RNU6-1188P-201ENST00000363795 107 ntBASIC1.7□□□□□ -2.14
SKA1Q96BD8 SNORA69.1-201ENST00000390904 137 ntBASIC1.7□□□□□ -2.14
SKA1Q96BD8 BTF3P4-201ENST00000418852 495 ntBASIC1.7□□□□□ -2.14
SKA1Q96BD8 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC1.7□□□□□ -2.14
SKA1Q96BD8 RPS27P16-201ENST00000425758 201 ntBASIC1.7□□□□□ -2.14
SKA1Q96BD8 AL135790.2-201ENST00000437701 267 ntBASIC1.7□□□□□ -2.14
SKA1Q96BD8 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.7□□□□□ -2.14
SKA1Q96BD8 SUMO1P2-201ENST00000452524 304 ntBASIC1.7□□□□□ -2.14
SKA1Q96BD8 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC1.7□□□□□ -2.14
SKA1Q96BD8 SNORA20.3-201ENST00000516880 132 ntBASIC1.7□□□□□ -2.14
SKA1Q96BD8 RNU7-4P-201ENST00000516961 62 ntBASIC1.7□□□□□ -2.14
SKA1Q96BD8 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.7□□□□□ -2.14
SKA1Q96BD8 AC113139.1-201ENST00000605049 239 ntBASIC1.7□□□□□ -2.14
SKA1Q96BD8 SNORA28-201ENST00000606769 126 ntBASIC1.7□□□□□ -2.14
SKA1Q96BD8 AL078604.3-201ENST00000615580 211 ntBASIC1.7□□□□□ -2.14
SKA1Q96BD8 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
SKA1Q96BD8 RNU1-22P-201ENST00000363334 158 ntBASIC1.69□□□□□ -2.14
SKA1Q96BD8 RNU6-407P-201ENST00000365280 104 ntBASIC1.69□□□□□ -2.14
SKA1Q96BD8 RNU6-318P-201ENST00000384283 103 ntBASIC1.69□□□□□ -2.14
SKA1Q96BD8 RNU6-310P-201ENST00000384655 107 ntBASIC1.69□□□□□ -2.14
SKA1Q96BD8 AL355796.1-201ENST00000406706 323 ntBASIC1.69□□□□□ -2.14
SKA1Q96BD8 SNORD12B-201ENST00000410433 91 ntBASIC1.69□□□□□ -2.14
SKA1Q96BD8 Y_RNA.646-201ENST00000410980 101 ntBASIC1.69□□□□□ -2.14
SKA1Q96BD8 AC138393.2-201ENST00000414742 246 ntBASIC1.69□□□□□ -2.14
SKA1Q96BD8 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.69□□□□□ -2.14
SKA1Q96BD8 AC022493.2-201ENST00000506122 481 ntBASIC1.69□□□□□ -2.14
SKA1Q96BD8 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.69□□□□□ -2.14
SKA1Q96BD8 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC1.69□□□□□ -2.14
SKA1Q96BD8 MIR6079-201ENST00000635807 62 ntBASIC1.69□□□□□ -2.14
SKA1Q96BD8 AL161722.3-201ENST00000605789 2983 ntBASIC1.69□□□□□ -2.14
SKA1Q96BD8 RNU6-1301P-201ENST00000362724 104 ntBASIC1.68□□□□□ -2.14
SKA1Q96BD8 RNY1P10-201ENST00000363268 113 ntBASIC1.68□□□□□ -2.14
SKA1Q96BD8 SNORA17.3-201ENST00000391159 129 ntBASIC1.68□□□□□ -2.14
SKA1Q96BD8 RNU6-1156P-201ENST00000410365 100 ntBASIC1.68□□□□□ -2.14
SKA1Q96BD8 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.68□□□□□ -2.14
SKA1Q96BD8 MTND4P28-201ENST00000426217 387 ntBASIC1.68□□□□□ -2.14
SKA1Q96BD8 RAB28P5-201ENST00000427490 651 ntBASIC1.68□□□□□ -2.14
SKA1Q96BD8 RNA5SP20-201ENST00000515976 84 ntBASIC1.68□□□□□ -2.14
SKA1Q96BD8 AC144568.1-201ENST00000520139 137 ntBASIC1.68□□□□□ -2.14
SKA1Q96BD8 AL390123.1-201ENST00000603216 237 ntBASIC1.68□□□□□ -2.14
SKA1Q96BD8 AL365434.2-201ENST00000607979 234 ntBASIC1.68□□□□□ -2.14
SKA1Q96BD8 AL021879.1-201ENST00000611756 288 ntBASIC1.68□□□□□ -2.14
SKA1Q96BD8 AL513423.1-201ENST00000621695 132 ntBASIC1.68□□□□□ -2.14
SKA1Q96BD8 SNORA27.1-201ENST00000362604 124 ntBASIC1.67□□□□□ -2.14
SKA1Q96BD8 AC018865.2-201ENST00000423631 129 ntBASIC1.67□□□□□ -2.14
SKA1Q96BD8 RPS29P23-201ENST00000458635 123 ntBASIC1.67□□□□□ -2.14
SKA1Q96BD8 Y_RNA.653-201ENST00000459091 95 ntBASIC1.67□□□□□ -2.14
SKA1Q96BD8 RNU6-1278P-201ENST00000516130 107 ntBASIC1.67□□□□□ -2.14
SKA1Q96BD8 RNU6-559P-201ENST00000516151 98 ntBASIC1.67□□□□□ -2.14
SKA1Q96BD8 SUMO2P16-201ENST00000519475 264 ntBASIC1.67□□□□□ -2.14
SKA1Q96BD8 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.67□□□□□ -2.14
SKA1Q96BD8 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.67□□□□□ -2.14
SKA1Q96BD8 MIR4781-201ENST00000585250 76 ntBASIC1.67□□□□□ -2.14
SKA1Q96BD8 AL355073.2-201ENST00000612106 557 ntBASIC1.67□□□□□ -2.14
SKA1Q96BD8 AC073349.3-201ENST00000617616 186 ntBASIC1.67□□□□□ -2.14
SKA1Q96BD8 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.67□□□□□ -2.14
SKA1Q96BD8 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
SKA1Q96BD8 RNU6-376P-201ENST00000384731 106 ntBASIC1.66□□□□□ -2.14
SKA1Q96BD8 AP1B1P2-201ENST00000416196 106 ntBASIC1.66□□□□□ -2.14
SKA1Q96BD8 RBMX2P4-201ENST00000441256 376 ntBASIC1.66□□□□□ -2.14
SKA1Q96BD8 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.66□□□□□ -2.14
SKA1Q96BD8 RAB11AP2-201ENST00000545905 639 ntBASIC1.66□□□□□ -2.14
SKA1Q96BD8 PRR13P7-201ENST00000605538 430 ntBASIC1.66□□□□□ -2.14
SKA1Q96BD8 U6.115-201ENST00000636045 103 ntBASIC1.66□□□□□ -2.14
SKA1Q96BD8 RNU6-1297P-201ENST00000384415 104 ntBASIC1.65□□□□□ -2.15
SKA1Q96BD8 MIR873-201ENST00000401120 77 ntBASIC1.65□□□□□ -2.15
SKA1Q96BD8 RNU4-62P-201ENST00000410125 130 ntBASIC1.65□□□□□ -2.15
SKA1Q96BD8 Y_RNA.592-201ENST00000410274 109 ntBASIC1.65□□□□□ -2.15
SKA1Q96BD8 RPL30P15-201ENST00000457129 321 ntBASIC1.65□□□□□ -2.15
SKA1Q96BD8 TRMT112P2-201ENST00000512910 132 ntBASIC1.65□□□□□ -2.15
SKA1Q96BD8 RNU2-56P-201ENST00000516826 190 ntBASIC1.65□□□□□ -2.15
SKA1Q96BD8 AL161670.1-201ENST00000554348 137 ntBASIC1.65□□□□□ -2.15
SKA1Q96BD8 DNAJC19P9-201ENST00000555084 351 ntBASIC1.65□□□□□ -2.15
SKA1Q96BD8 AL359821.1-201ENST00000605519 182 ntBASIC1.65□□□□□ -2.15
SKA1Q96BD8 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC1.65□□□□□ -2.15
SKA1Q96BD8 SNORD3E-202ENST00000627253 216 ntBASIC1.65□□□□□ -2.15
SKA1Q96BD8 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
SKA1Q96BD8 RNU6-890P-201ENST00000384121 107 ntBASIC1.64□□□□□ -2.15
SKA1Q96BD8 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC1.64□□□□□ -2.15
SKA1Q96BD8 STAG3L5P-204ENST00000443759 179 ntBASIC1.64□□□□□ -2.15
SKA1Q96BD8 AC009474.2-201ENST00000451383 136 ntBASIC1.64□□□□□ -2.15
SKA1Q96BD8 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.64□□□□□ -2.15
SKA1Q96BD8 RPL30P7-201ENST00000479312 323 ntBASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms