Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.65□□□□□ -1.82
CCDC116Q8IYX3 RNA5SP97-201ENST00000365006 84 ntBASIC3.65□□□□□ -1.83
CCDC116Q8IYX3 RNA5SP283-201ENST00000365604 119 ntBASIC3.65□□□□□ -1.83
CCDC116Q8IYX3 RNY1P6-201ENST00000384193 109 ntBASIC3.65□□□□□ -1.83
CCDC116Q8IYX3 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.65□□□□□ -1.83
CCDC116Q8IYX3 ATP6V0E1P1-201ENST00000412537 226 ntBASIC3.65□□□□□ -1.83
CCDC116Q8IYX3 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.65□□□□□ -1.83
CCDC116Q8IYX3 RNU6-893P-201ENST00000458841 100 ntBASIC3.65□□□□□ -1.83
CCDC116Q8IYX3 AC010401.1-201ENST00000463867 348 ntBASIC3.65□□□□□ -1.83
CCDC116Q8IYX3 AC093259.1-201ENST00000509755 300 ntBASIC3.65□□□□□ -1.83
CCDC116Q8IYX3 RNU6-341P-201ENST00000516973 96 ntBASIC3.65□□□□□ -1.83
CCDC116Q8IYX3 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.65□□□□□ -1.83
CCDC116Q8IYX3 AC022523.2-201ENST00000561045 150 ntBASIC3.65□□□□□ -1.83
CCDC116Q8IYX3 AL359075.3-201ENST00000613288 217 ntBASIC3.65□□□□□ -1.83
CCDC116Q8IYX3 RNA5SP196-201ENST00000625967 102 ntBASIC3.65□□□□□ -1.83
CCDC116Q8IYX3 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.65□□□□□ -1.83
CCDC116Q8IYX3 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CCDC116Q8IYX3 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.64□□□□□ -1.83
CCDC116Q8IYX3 Y_RNA.593-201ENST00000410292 98 ntBASIC3.64□□□□□ -1.83
CCDC116Q8IYX3 AC009969.1-201ENST00000438726 172 ntBASIC3.64□□□□□ -1.83
CCDC116Q8IYX3 AC007224.1-201ENST00000564410 144 ntBASIC3.64□□□□□ -1.83
CCDC116Q8IYX3 AL606490.9-201ENST00000603331 271 ntBASIC3.64□□□□□ -1.83
CCDC116Q8IYX3 ZYXP1-201ENST00000617638 118 ntBASIC3.64□□□□□ -1.83
CCDC116Q8IYX3 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
CCDC116Q8IYX3 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
CCDC116Q8IYX3 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CCDC116Q8IYX3 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.63□□□□□ -1.83
CCDC116Q8IYX3 MAPK10-373ENST00000641983 6772 ntBASIC3.63□□□□□ -1.83
CCDC116Q8IYX3 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.63□□□□□ -1.83
CCDC116Q8IYX3 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CCDC116Q8IYX3 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
CCDC116Q8IYX3 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.63□□□□□ -1.83
CCDC116Q8IYX3 snoU2-30.2-201ENST00000362805 70 ntBASIC3.63□□□□□ -1.83
CCDC116Q8IYX3 RNU4-36P-201ENST00000364294 144 ntBASIC3.63□□□□□ -1.83
CCDC116Q8IYX3 RNU1-133P-201ENST00000364867 167 ntBASIC3.63□□□□□ -1.83
CCDC116Q8IYX3 Y_RNA.332-201ENST00000365271 113 ntBASIC3.63□□□□□ -1.83
CCDC116Q8IYX3 Y_RNA.466-201ENST00000384294 113 ntBASIC3.63□□□□□ -1.83
CCDC116Q8IYX3 MIR522-201ENST00000385071 87 ntBASIC3.63□□□□□ -1.83
CCDC116Q8IYX3 RNU6-1077P-201ENST00000410506 102 ntBASIC3.63□□□□□ -1.83
CCDC116Q8IYX3 RNU6-628P-201ENST00000410675 107 ntBASIC3.63□□□□□ -1.83
CCDC116Q8IYX3 FTH1P12-201ENST00000432137 551 ntBASIC3.63□□□□□ -1.83
CCDC116Q8IYX3 AC009238.1-201ENST00000442165 424 ntBASIC3.63□□□□□ -1.83
CCDC116Q8IYX3 AC009237.6-201ENST00000446969 424 ntBASIC3.63□□□□□ -1.83
CCDC116Q8IYX3 AL500522.2-201ENST00000448562 343 ntBASIC3.63□□□□□ -1.83
CCDC116Q8IYX3 RNU7-25P-201ENST00000516544 62 ntBASIC3.63□□□□□ -1.83
CCDC116Q8IYX3 AL358944.1-201ENST00000528537 144 ntBASIC3.63□□□□□ -1.83
CCDC116Q8IYX3 DEFB131E-201ENST00000532329 154 ntBASIC3.63□□□□□ -1.83
CCDC116Q8IYX3 AC091544.4-201ENST00000555268 342 ntBASIC3.63□□□□□ -1.83
CCDC116Q8IYX3 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.63□□□□□ -1.83
CCDC116Q8IYX3 MAPK10-362ENST00000641864 4484 ntBASIC3.63□□□□□ -1.83
CCDC116Q8IYX3 AC091564.4-201ENST00000533934 2194 ntBASIC3.63□□□□□ -1.83
CCDC116Q8IYX3 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CCDC116Q8IYX3 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.62□□□□□ -1.83
CCDC116Q8IYX3 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
CCDC116Q8IYX3 MIR340-201ENST00000362125 95 ntBASIC3.62□□□□□ -1.83
CCDC116Q8IYX3 RNY3P2-201ENST00000362918 102 ntBASIC3.62□□□□□ -1.83
CCDC116Q8IYX3 RNA5SP322-201ENST00000363617 119 ntBASIC3.62□□□□□ -1.83
CCDC116Q8IYX3 AC106707.2-201ENST00000484182 374 ntBASIC3.62□□□□□ -1.83
CCDC116Q8IYX3 SCARNA23-201ENST00000516060 130 ntBASIC3.62□□□□□ -1.83
CCDC116Q8IYX3 RNU6-991P-201ENST00000516168 107 ntBASIC3.62□□□□□ -1.83
CCDC116Q8IYX3 AC006441.5-201ENST00000612680 209 ntBASIC3.62□□□□□ -1.83
CCDC116Q8IYX3 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC3.62□□□□□ -1.83
CCDC116Q8IYX3 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.62□□□□□ -1.83
CCDC116Q8IYX3 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CCDC116Q8IYX3 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CCDC116Q8IYX3 GABRG2-229ENST00000641017 3628 ntBASIC3.61□□□□□ -1.83
CCDC116Q8IYX3 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CCDC116Q8IYX3 Y_RNA.17-201ENST00000362433 111 ntBASIC3.61□□□□□ -1.83
CCDC116Q8IYX3 Y_RNA.37-201ENST00000362606 108 ntBASIC3.61□□□□□ -1.83
CCDC116Q8IYX3 SNORD115-28-201ENST00000363931 81 ntBASIC3.61□□□□□ -1.83
CCDC116Q8IYX3 RNU6-816P-201ENST00000390914 107 ntBASIC3.61□□□□□ -1.83
CCDC116Q8IYX3 RNU1-101P-201ENST00000391171 127 ntBASIC3.61□□□□□ -1.83
CCDC116Q8IYX3 RNU6-1268P-201ENST00000391214 107 ntBASIC3.61□□□□□ -1.83
CCDC116Q8IYX3 RNA5SP467-201ENST00000391274 118 ntBASIC3.61□□□□□ -1.83
CCDC116Q8IYX3 RNU6-1239P-201ENST00000391310 107 ntBASIC3.61□□□□□ -1.83
CCDC116Q8IYX3 MIR1912-201ENST00000410389 80 ntBASIC3.61□□□□□ -1.83
CCDC116Q8IYX3 TRIAP1P1-201ENST00000427062 225 ntBASIC3.61□□□□□ -1.83
CCDC116Q8IYX3 RPS12P18-201ENST00000442381 270 ntBASIC3.61□□□□□ -1.83
CCDC116Q8IYX3 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC3.61□□□□□ -1.83
CCDC116Q8IYX3 RNU6ATAC12P-201ENST00000516542 115 ntBASIC3.61□□□□□ -1.83
CCDC116Q8IYX3 AC022695.1-201ENST00000522089 237 ntBASIC3.61□□□□□ -1.83
CCDC116Q8IYX3 MIR4305-201ENST00000583252 102 ntBASIC3.61□□□□□ -1.83
CCDC116Q8IYX3 MIR6875-201ENST00000617506 72 ntBASIC3.61□□□□□ -1.83
CCDC116Q8IYX3 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.61□□□□□ -1.83
CCDC116Q8IYX3 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
CCDC116Q8IYX3 RNU6-228P-201ENST00000362700 106 ntBASIC3.6□□□□□ -1.83
CCDC116Q8IYX3 MIR134-201ENST00000385258 73 ntBASIC3.6□□□□□ -1.83
CCDC116Q8IYX3 MIR199A2-201ENST00000385289 110 ntBASIC3.6□□□□□ -1.83
CCDC116Q8IYX3 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.6□□□□□ -1.83
CCDC116Q8IYX3 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.6□□□□□ -1.83
CCDC116Q8IYX3 RNU1-131P-201ENST00000458943 161 ntBASIC3.6□□□□□ -1.83
CCDC116Q8IYX3 AC006483.1-201ENST00000487308 313 ntBASIC3.6□□□□□ -1.83
CCDC116Q8IYX3 TRBV12-2-201ENST00000489763 344 ntBASIC3.6□□□□□ -1.83
CCDC116Q8IYX3 SNORD36C-201ENST00000516733 66 ntBASIC3.6□□□□□ -1.83
CCDC116Q8IYX3 RNU6-711P-201ENST00000517255 106 ntBASIC3.6□□□□□ -1.83
CCDC116Q8IYX3 SCARNA11.3-201ENST00000517276 130 ntBASIC3.6□□□□□ -1.83
CCDC116Q8IYX3 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.6□□□□□ -1.83
CCDC116Q8IYX3 UCA1.1-201ENST00000620952 75 ntBASIC3.6□□□□□ -1.83
CCDC116Q8IYX3 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.6□□□□□ -1.83
CCDC116Q8IYX3 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 13.3 ms